# -*-Perl-*- Test Harness script for Bioperl # $Id: TreeIO.t 14580 2008-03-01 17:01:30Z cjfields $ use strict; BEGIN { use lib '.'; use Bio::Root::Test; test_begin(-tests => 7); use_ok('Bio::TreeIO'); } my $verbose = test_debug(); my $treeio = Bio::TreeIO->new(-verbose => $verbose, -file => test_input_file('test.nhx')); my $tree; ok($treeio); $tree = $treeio->next_tree; isa_ok($tree, 'Bio::Tree::TreeI'); my @nodes = $tree->get_nodes; is(@nodes, 13, "Total Nodes"); my $adhy = $tree->find_node('ADHY'); is($adhy->branch_length, 0.1); is(($adhy->get_tag_values('S'))[0], 'nematode'); is(($adhy->get_tag_values('E'))[0], '1.1.1.1');