BLASTP 2.1.3 [Apr-11-2001] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= CATH_RAT (333 letters) Database: /data_2/jason/blastdb/wormpep62 20,085 sequences; 8,813,425 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value T03E6.7 CE16333 cathepsin-like protease (HINXTON) TR:O4573... 196 2e-50 F41E6.6 CE10254 cysteine protease and a protease inhibitor... 166 2e-41 R09F10.1 CE28755 peptidase (ST.LOUIS) TR:Q23030 protein_id... 162 3e-40 R07E3.1 CE02295 cysteine proteinase (HINXTON) TR:Q21810 pr... 126 2e-29 Y40H7A.10 CE21821 Cysteine protease (HINXTON) TR:Q9XWA4 pr... 123 1e-28 >T03E6.7 CE16333 cathepsin-like protease (HINXTON) TR:O45734 protein_id:CAB07275.1 Length = 337 Score = 196 bits (498), Expect = 2e-50 Identities = 122/318 (38%), Positives = 174/318 (54%), Gaps = 21/318 (6%) Query: 26 NAIEKFHFTSWMKQHQKTYSSREYSHRLQVFANNWRKIQAHNQRNH-----TFKMGLNQF 80 +AIEK+ + + K YS E ++ F N I+ HN R+H TF+MGLN Sbjct: 27 SAIEKWD--DYKEDFDKEYSESEEQTYMEAFVKNMIHIENHN-RDHRLGRKTFEMGLNHI 83 Query: 81 SDMSFAEIK----HKYLWSEPQNCSATKSNYLRGTG-PYPSSMDWRKKGNVVSPVKNQGA 135 +D+ F++ + ++ L+ + + S++L P +DWR ++V+ VKNQG Sbjct: 84 ADLPFSQYRKLNGYRRLFGDSR--IKNSSSFLAPFNVQVPDEVDWRDT-HLVTDVKNQGM 140 Query: 136 CGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNK 195 CGSCW FS TGALE A G++++L+EQ LVDC+ + NHGC GGL QAFEYI N Sbjct: 141 CGSCWAFSATGALEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRDNH 200 Query: 196 GIMGEDSYPYIGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEV-T 254 G+ E+SYPY G++ +C FN + A K V+ DE + AVA P+S A + Sbjct: 201 GVDTEESYPYKGRDMKCHFNKKTVGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGH 260 Query: 255 EDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYG-EQNGLLYWIVKXXXXXXXXXXXYFLI 313 F +YK GVY C + ++++H VL VGYG + YWIVK Y I Sbjct: 261 RSFQLYKKGVYYDEEC--SSEELDHGVLLVGYGTDPEHGDYWIVKNSWGAGWGEKGYIRI 318 Query: 314 ERGK-NMCGLAACASYPI 330 R + N CG+A ASYP+ Sbjct: 319 ARNRNNHCGVATKASYPL 336 >F41E6.6 CE10254 cysteine protease and a protease inhibitor (ST.LOUIS) TR:O16454 protein_id:AAB65956.1 Length = 498 Score = 166 bits (419), Expect = 2e-41 Identities = 108/325 (33%), Positives = 155/325 (47%), Gaps = 35/325 (10%) Query: 33 FTSWMKQHQKTYSS-REYSHRLQVFANNWRKI-QAHNQRNHTFKMGLNQFSDMSFAEIKH 90 F ++ +H+K Y++ RE R +VF N + I + T G +FSDM+ E K Sbjct: 174 FLDFVDRHEKKYTNKREVLKRFRVFKKNAKVIRELQKNEQGTAVYGFTKFSDMTTMEFKK 233 Query: 91 ---KYLWSEP----QNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFS 143 Y W +P + + K + P S DWR+KG V+ VKNQG CGSCW FS Sbjct: 234 IMLPYQWEQPVYPMEQANFEKHDVTINEEDLPESFDWREKG-AVTQVKNQGNCGSCWAFS 292 Query: 144 TTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFE------------YI 191 TTG +E A IA K+++L+EQ+LVDC + + GC GGLPS A++ + Sbjct: 293 TTGNVEGAWFIAKNKLVSLSEQELVDC--DSMDQGCNGGLPSNAYKIGKFVVSDNYCFLV 350 Query: 192 LYNK---------GIMGEDSYPYIGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVA 242 Y+K G+ ED+YPY G+ C + ++ V + +DE M + + Sbjct: 351 FYHKTTKEIIRMGGLEPEDAYPYDGRGETCHLVRKDIAVYINGSVELP-HDEVEMQKWLV 409 Query: 243 LYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKXXXX 302 P+S Y+ GV P +NH VL VGYG+ YWIVK Sbjct: 410 TKGPISIGLN-ANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWG 468 Query: 303 XXXXXXXYFLIERGKNMCGLAACAS 327 YF + RGKN+CG+ A+ Sbjct: 469 PNWGEAGYFKLYRGKNVCGVQEMAT 493 >R09F10.1 CE28755 peptidase (ST.LOUIS) TR:Q23030 protein_id:AAC69091.2 Length = 383 Score = 162 bits (410), Expect = 3e-40 Identities = 97/304 (31%), Positives = 157/304 (50%), Gaps = 19/304 (6%) Query: 37 MKQHQKTYSSREYSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKH------ 90 +K +K S E+ +R Q+F N + +A +RN + +N+F+D + E++ Sbjct: 87 LKFDRKYTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEELQKMVQENK 146 Query: 91 --KYLWSEPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGAL 148 KY + P+ + +YL P+S+DWR++G + +P+KNQG CGSCW F+T ++ Sbjct: 147 YTKYDFDTPK----FEGSYLETGVIRPASIDWREQGKL-TPIKNQGQCGSCWAFATVASV 201 Query: 149 ESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIG- 207 E+ AI GK+++L+EQ++VDC + N+GC GG A +++ N G+ E YPY Sbjct: 202 EAQNAIKKGKLVSLSEQEMVDC--DGRNNGCSGGYRPYAMKFVKEN-GLESEKEYPYSAL 258 Query: 208 KNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSS 267 K+ QC F+ + + N+E + V PV+F V + Y+SG+++ Sbjct: 259 KHDQCFLKENDTRVFIDD-FRMLSNNEEDIANWVGTKGPVTFGMNVVKAMYSYRSGIFNP 317 Query: 268 NSCHKTPDKVN-HAVLAVGYGEQNGLLYWIVKXXXXXXXXXXXYFLIERGKNMCGLAACA 326 + T + HA+ +GYG + YWIVK YF + RG N CGLA Sbjct: 318 SVEDCTEKSMGAHALTIIGYGGEGESAYWIVKNSWGTSWGASGYFRLARGVNSCGLANTV 377 Query: 327 SYPI 330 PI Sbjct: 378 VAPI 381 >R07E3.1 CE02295 cysteine proteinase (HINXTON) TR:Q21810 protein_id:CAA89070.1 Length = 402 Score = 126 bits (316), Expect = 2e-29 Identities = 97/325 (29%), Positives = 152/325 (45%), Gaps = 31/325 (9%) Query: 20 TAELTVNAIEKFHFTSWMKQHQKTYS-SREYSHRLQVFANNWRKIQAHNQRNH--TFKMG 76 T E + I K + ++ ++ K+Y+ S+E RL + N I N +N + + G Sbjct: 78 TNERGIQNIAK-EYIAYTEKFDKSYATSQESLKRLNAYYNTDENIANWNIQNEHGSAEYG 136 Query: 77 LNQFSDMSFAEIK--------HKYLWSE-------PQNCSATKSNYLRGTGPYPSSMDWR 121 N SD + E + +K L E P++ +A K + P+P DWR Sbjct: 137 HNDMSDWTDEEFEKTLLPKSFYKRLHKEAEFIEPIPESLTAKKGE---SSSPFPDFFDWR 193 Query: 122 KKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQG 181 K NV++PVK QG CGSCW F++T +E+A AIA G+ L+EQ L+DC + ++ C G Sbjct: 194 DK-NVITPVKAQGQCGSCWAFASTATVEAAWAIAHGEKRNLSEQTLLDC--DLVDNACDG 250 Query: 182 GLPSQAFEYILYNKGIMGEDSYPYIG-KNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEA 240 G +AF YI + G+ PY+ + C N +K +DE +++ Sbjct: 251 GDEDKAFRYI-HRNGLANAVDLPYVAHRQNGCAVNDHWNTTRIK-AAYFLHHDEDSIINW 308 Query: 241 VALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVN-HAVLAVGYG-EQNGLLYWIVK 298 + + PV+ V + YK GV++ + + + HA+L GYG + G YWIVK Sbjct: 309 LVNFGPVNIGMAVIQPMRAYKGGVFTPSEYACKNEVIGLHALLITGYGTSKTGEKYWIVK 368 Query: 299 XX-XXXXXXXXXYFLIERGKNMCGL 322 Y RG N CG+ Sbjct: 369 NSWGNTWGVEHGYIYFARGINACGI 393 >Y40H7A.10 CE21821 Cysteine protease (HINXTON) TR:Q9XWA4 protein_id:CAA22062.1 Length = 343 Score = 123 bits (309), Expect = 1e-28 Identities = 92/304 (30%), Positives = 145/304 (47%), Gaps = 26/304 (8%) Query: 26 NAIEKFHFTSWMKQHQKTYSSREYSHRLQVFANNWRKIQAHNQRNH---TFKMGLNQFSD 82 NA + F +++++ Y E R +F+ N ++ +N+ + T++ LN FSD Sbjct: 49 NAFQNF-LVKYLREYPNEY---EIVKRFTIFSRNLDLVERYNKEDAGKVTYE--LNDFSD 102 Query: 83 MSFAEIKHKYLWSEPQNCSAT-KSNYLRGTGPYPSSMDWRKKG--NVVSPVKNQGACGSC 139 ++ E K + +P + + K L P+S+DWR N V+ +K QG CGSC Sbjct: 103 LTEEEWKKYLMTPKPDHSEKSLKPKTLIDKKNLPNSVDWRNVNGTNHVTGIKYQGPCGSC 162 Query: 140 WTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMG 199 W F+T A+ESAV+I+ G + +L+ QQL+DC + C GG P +A +Y + GI Sbjct: 163 WAFATAAAIESAVSISGGGLQSLSSQQLLDC--TVVSDKCGGGEPVEALKY-AQSHGITT 219 Query: 200 EDSYPYIGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNP-VSFAFEVTEDFM 258 +YPY +C+ VA + + + DE M + VAL P + A T Sbjct: 220 AHNYPYYFWTTKCR-ETVPTVARISSWMKAESEDE--MAQIVALNGPMIVCANFATNKNR 276 Query: 259 MYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKXXXXXXXXXXXYFLIERGKN 318 Y SG+ C P HA++ +GYG YWI+K Y ++R N Sbjct: 277 FYHSGIAEDPDCGTEP---THALIVIGYGPD----YWILKNTYSKVWGEKGYMRVKRDVN 329 Query: 319 MCGL 322 CG+ Sbjct: 330 WCGI 333 >Y113G7B.15 CE23295 (HINXTON) TR:Q9U2X1 protein_id:CAB54334.1 Length = 328 Score = 120 bits (302), Expect = 9e-28 Identities = 94/317 (29%), Positives = 140/317 (43%), Gaps = 40/317 (12%) Query: 40 HQKTYSS-REYSHRLQVFANNWRKIQAHNQ------RNHTFKMGLNQFSDMSFAEIKHKY 92 H+K Y + E RL FA N +KIQ N RN TF G N+F+D + E+ + Sbjct: 3 HKKHYRTPAEKDRRLAHFAKNHQKIQELNAKARREGRNVTF--GWNKFADKNRQELSARN 60 Query: 93 LWSEPQNCSAT---KSNYLRGTGPYPSSMDWRKKGN----------------VVSPVKNQ 133 P+N + K + RG+ + + R+ G+ VV PVK+Q Sbjct: 61 SKIHPKNHTDLPIYKPRHPRGSRNHHNKRSKRQSGDIPDYFDLRDIYVDGSPVVGPVKDQ 120 Query: 134 GACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILY 193 CG CW F+TT E+A + S +L++Q++ DCA + + GC GG P + +++ Sbjct: 121 EQCGCCWAFATTAITEAANTLYSKSFTSLSDQEICDCADSGDTPGCVGGDPRNGLK-MVH 179 Query: 194 NKGIMGEDSYPY----IGKNGQCKFNPEKAVAFVKNVVNITLND-----EAAMVEAVALY 244 +G + YPY G C EK+ +N+ D E M + Sbjct: 180 LRGQSSDGDYPYEEYRANTTGNC-VGDEKSTVIQPETLNVYRFDQDYAEEDIMENLYLNH 238 Query: 245 NPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYG-EQNGLLYWIVKXXXXX 303 P + F V E+F Y SGV S C++ H+V VGYG +G+ YW+V+ Sbjct: 239 IPTAVYFRVGENFEWYTSGVLQSEDCYQMTPAEWHSVAIVGYGTSDDGVPYWLVRNSWNS 298 Query: 304 XXXXXXYFLIERGKNMC 320 Y I RG N C Sbjct: 299 DWGLHGYVKIRRGVNWC 315 >K02E7.10 CE11640 protease (ST.LOUIS) TR:O17255 protein_id:AAB71030.1 Length = 299 Score = 114 bits (284), Expect = 1e-25 Identities = 70/216 (32%), Positives = 107/216 (49%), Gaps = 8/216 (3%) Query: 118 MDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIAS-GKMMTLAEQQLVDCAQNFNN 176 +DWR+KG +V PVK+QG C + + F+ A+ES A A+ GK+++ +EQQ++DCA NF N Sbjct: 84 LDWREKG-IVGPVKDQGKCNASYAFAAIAAIESMYAKANNGKLLSFSEQQIIDCA-NFTN 141 Query: 177 HGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKN--GQCKFNPEKAVAFVKNVVNITLNDE 234 CQ L + L G+ E YPY+GK G+C+++ K + +++ N+E Sbjct: 142 P-CQENLENVLSNRFLKENGVGTEADYPYVGKENVGKCEYDSSK-MKLRPTYIDVYPNEE 199 Query: 235 AAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLY 294 A + + F F YK+G+Y+ ++ VGYG+ Y Sbjct: 200 WARAH-ITTFGTGYFRMRSPPSFFHYKTGIYNPTKEECGNANEARSLAIVGYGKDGAEKY 258 Query: 295 WIVKXXXXXXXXXXXYFLIERGKNMCGLAACASYPI 330 WIVK Y + R N CG+A S PI Sbjct: 259 WIVKGSFGTSWGEHGYMKLARNVNACGMAESISIPI 294 >C32B5.7 CE08515 cathepsin-like peptidase (ST.LOUIS) TR:P91111 protein_id:AAB37963.1 Length = 250 Score = 108 bits (270), Expect = 5e-24 Identities = 69/197 (35%), Positives = 104/197 (52%), Gaps = 18/197 (9%) Query: 106 NYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQ 165 NY P+ +DWR +G VV PVK+QG C + + F+ A+ES AIA+G++++ +EQ Sbjct: 63 NYKNAKKPF---LDWRDEG-VVGPVKDQGNCNASYAFAAISAIESMYAIANGQLLSFSEQ 118 Query: 166 QLVDCAQNFNNHGCQ-GGLPSQAFEYILYNKGIMGEDSYPYIG-KNGQCKFNPEKAVAFV 223 Q++DC GC P A Y L KGI YP++G KN +C+++ +KA + Sbjct: 119 QIIDCL-----GGCAIESDPMMAMTY-LERKGIETYTDYPFVGKKNEKCEYDSKKAYLIL 172 Query: 224 KNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVY--SSNSCHKTPDKVNHAV 281 + + ++DE+ + + P F F YKSG+Y + C T +K A+ Sbjct: 173 DDTYD--MSDESLALVFIDERGPGLFTMNTPPSFFNYKSGIYNPTEEECKSTNEK--RAL 228 Query: 282 LAVGYGEQNGLLYWIVK 298 VGYG G YWIVK Sbjct: 229 TIVGYGNDKGQNYWIVK 245 >Y51A2D.8 CE19204 Cysteine proteases (2 domains) (HINXTON) TR:Q9XXQ7 protein_id:CAA16407.1 Length = 386 Score = 106 bits (265), Expect = 2e-23 Identities = 82/330 (24%), Positives = 137/330 (40%), Gaps = 44/330 (13%) Query: 33 FTSWMKQHQKTYSSR-EYSHRLQVFANNWRKIQAHNQRN----HTFKMGLNQFSDMSFAE 87 F + K++ + Y E R F ++ + N ++ + + G+N+FSD+S AE Sbjct: 43 FEDFKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFGINKFSDLSTAE 102 Query: 88 IKHKYLWSEPQN------------------CSATKSNYLRGTGPYPSSMDWRKKG----N 125 + P N K+ + R + YP D R + Sbjct: 103 FHGRLSNVVPSNNTGLPMLNFDKKKPDFRAADMNKTRHKRRSTRYPDYFDLRNEKINGRY 162 Query: 126 VVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPS 185 +V P+K+QG C CW F+ T +E+ A SGK +L++Q++ DC GC+GG + Sbjct: 163 IVGPIKDQGQCACCWGFAVTALVETVYAAHSGKFKSLSDQEVCDCGTE-GTPGCKGGSLT 221 Query: 186 QAFEYILYNKGIMGEDSYPY----IGKNGQCKFNPEKAV----AFVKNVVNITLNDEAAM 237 +Y+ G+ G++ YPY + +C+ + AF V+N +E + Sbjct: 222 LGVQYV-KKYGLSGDEDYPYDQNRANQGRRCRLRETDRIVPARAFNFAVINPRRAEEQII 280 Query: 238 VEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYG---EQNGLL- 293 PV+ F+V + F YK GV + C + HA VGY + G Sbjct: 281 QVLTEWKVPVAVYFKVGDQFKEYKEGVIIEDDCRRATQW--HAGAIVGYDTVEDSRGRSH 338 Query: 294 -YWIVKXXXXXXXXXXXYFLIERGKNMCGL 322 YWI+K Y + RG++ C + Sbjct: 339 DYWIIKNSWGGDWAESGYVRVVRGRDWCSI 368 >Y71H2AR.2 CE22930 (ST.LOUIS) protein_id:AAK29985.1 Length = 345 Score = 103 bits (257), Expect = 1e-22 Identities = 72/235 (30%), Positives = 105/235 (44%), Gaps = 16/235 (6%) Query: 91 KYLWSEPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALES 150 ++ W P + T +L DWR+KG +V PVK+QG C + F+ T ++ES Sbjct: 69 RFQWETPIHMDRTTEEFL----------DWREKG-IVGPVKDQGKCNASHAFAITSSIES 117 Query: 151 AVAIAS-GKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGK- 208 A A+ G +++ +EQQL+DC GC+ A Y L GI E YPY+ K Sbjct: 118 MYAKATNGTLLSFSEQQLIDCNDQ-GYKGCEEQFAMNAIGY-LATHGIETEADYPYVDKT 175 Query: 209 NGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSN 268 N +C F+ K+ +K V N+ V V Y P F YK G+Y+ + Sbjct: 176 NEKCTFDSTKSKIHLKKGVVAEGNEVLGKVY-VTNYGPAFFTMRAPPSLYDYKIGIYNPS 234 Query: 269 SCHKTPDKVNHAVLAVGYGEQNGLLYWIVKXXXXXXXXXXXYFLIERGKNMCGLA 323 T +++ VGYG + YWIVK Y + R N C +A Sbjct: 235 IEECTSTHEIRSMVIVGYGIEGEQKYWIVKGSFGTSWGEQGYMKLARDVNACAMA 289 >C50F4.3 CE05468 thiol protease (HINXTON) TR:Q18740 protein_id:CAA94738.1 Length = 374 Score = 102 bits (254), Expect = 3e-22 Identities = 86/319 (26%), Positives = 129/319 (39%), Gaps = 31/319 (9%) Query: 33 FTSWMKQHQKTYSSR-EYSHRLQVFANNWRKI----QAHNQRNHTFKMGLNQFSDMSFAE 87 F ++ ++++ Y E R Q F ++ +A + H K G+N+FSD+S E Sbjct: 47 FEDFIVKYKRNYKDEIEKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSKKE 106 Query: 88 IKHKYLWSEP--QNCSATKSNYL-----RGTGPYPSSMDWRKKG----NVVSPVKNQGAC 136 I Y P N + K N R P + D R K ++ P+K Q +C Sbjct: 107 IHGMYSKFGPPKNNTNVPKFNLKNLRVKRQMEGLPKTFDLRNKKVGGHYIIGPIKTQDSC 166 Query: 137 GSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKG 196 CW F+ T E+A+ + K M L+EQ++ DCA + GC GG P EYI G Sbjct: 167 ACCWGFAATAVAEAALTVHLKKAMNLSEQEVCDCAPK-HGPGCNGGDPVDGLEYI-KEMG 224 Query: 197 IMGEDSYPY-------IGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYN-PVS 248 + G YP+ +G+ K++ E + N E M + L N P+S Sbjct: 225 LTGGKEYPFNVNRSTQLGRCESEKYDRELNPLELDYYAIDPFNAEYQMTHHLYLLNLPIS 284 Query: 249 FAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNG-----LLYWIVKXXXXX 303 AF Y SG+ C H+ VGYG + YWI + Sbjct: 285 VAFRTGASLSSYLSGILELADCDDEKGGHWHSGAIVGYGTTKNSAGRTVDYWIFRNSWWT 344 Query: 304 XXXXXXYFLIERGKNMCGL 322 Y I RG++ C + Sbjct: 345 DWGDDGYARIVRGEDWCSI 363 >F26E4.3 CE17714 cysteine protease (HINXTON) TR:P90850 protein_id:CAB03007.1 Length = 491 Score = 87.4 bits (215), Expect = 1e-17 Identities = 70/237 (29%), Positives = 102/237 (42%), Gaps = 33/237 (13%) Query: 115 PSSMDWRKK-GNVVSPVKNQGACGSCWTFSTTGALESAVAIAS-GKM-MTLAEQQLVDCA 171 P D R K G ++ PV +QG CGS W+ STT +AI S G++ TL+ QQL+ C Sbjct: 224 PEHFDARDKWGPLIHPVADQGDCGSSWSVSTTAISSDRLAIISEGRINSTLSSQQLLSCN 283 Query: 172 QNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNG-------------------QC 212 Q+ GC+GG +A+ YI G++G+ YPY+ +C Sbjct: 284 QH-RQKGCEGGYLDRAWWYI-RKLGVVGDHCYPYVSGQSREPGHCLIPKRDYTNRQGLRC 341 Query: 213 KFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVY--SSNSC 270 + + AF + E + + PV F V EDF MY GVY S + Sbjct: 342 PSGSQDSTAFKMTPPYKVSSREEDIQTELMTNGPVQATFVVHEDFFMYAGGVYQHSDLAA 401 Query: 271 HKTPDKV---NHAVLAVGYGEQNG----LLYWIVKXXXXXXXXXXXYFLIERGKNMC 320 K V H+V +G+G + + YW+ YF + RG+N C Sbjct: 402 QKGASSVAEGYHSVRVLGWGVDHSTGKPIKYWLCANSWGTQWGEDGYFKVLRGENHC 458 >C52E4.1 CE08943 locus:cpr-1 cathepsin-like cysteine protease (HINXTON) TR:Q18783 protein_id:CAB01410.1 Length = 340 Score = 85.1 bits (209), Expect = 5e-17 Identities = 67/269 (24%), Positives = 111/269 (40%), Gaps = 33/269 (12%) Query: 82 DMSFAEIKHKYLWSEPQNCSATKSNYLRGTGP--YPSSMDWRKKGNVVSPVKNQGACGSC 139 +M F + KY + AT+ + + P + S W + ++ +++Q CGSC Sbjct: 66 EMKFKLMDGKYAAAHSDEIRATEQEVVLASVPATFDSRTQWSECKSI-KLIRDQATCGSC 124 Query: 140 WTFSTTGALESAVAIAS--GKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGI 197 W F + I + + ++ L+ C + +GC+GG P QA + +KG+ Sbjct: 125 WAFGAAEMISDRTCIETKGAQQPIISPDDLLSCCGSSCGNGCEGGYPIQALRW-WDSKGV 183 Query: 198 MGEDSYPYIG-----------------KNGQCKFNPEK--AVAFVKN----VVNITLNDE 234 + Y G K C + + + A+ K+ V + Sbjct: 184 VTGGDYHGAGCKPYPIAPCTSGNCPESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKN 243 Query: 235 AAMVEAVALYN-PVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLL 293 AA ++A N PV AF V EDF YKSGVY + HA+ +G+G ++G Sbjct: 244 AASIQAEIYANGPVEAAFSVYEDFYKYKSGVYKHTAGKYLG---GHAIKIIGWGTESGSP 300 Query: 294 YWIVKXXXXXXXXXXXYFLIERGKNMCGL 322 YW+V +F I RG + CG+ Sbjct: 301 YWLVANSWGVNWGESGFFKIYRGDDQCGI 329 >M04G12.2 CE12424 cysteine protease (HINXTON) TR:P92005 protein_id:CAB03209.1 Length = 467 Score = 75.1 bits (183), Expect = 6e-14 Identities = 68/224 (30%), Positives = 100/224 (44%), Gaps = 44/224 (19%) Query: 101 SATKSNYLRGTGPYPSSMDWRKKG--NVVSPVKNQGA---CGSCWTFSTTGALESAVAIA 155 S+ KSN L P+ DWR N SP +NQ CGSCW F TTGAL +A Sbjct: 214 SSFKSNDL------PTGWDWRNVSGVNYCSPTRNQHIPVYCGSCWVFGTTGALNDRFNVA 267 Query: 156 -SGK--MMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQC 212 G+ M L+ Q+++DC N CQGG E+ +G++ E Y NG+C Sbjct: 268 RKGRWPMTQLSPQEIIDCNGKGN---CQGGEIGNVLEHAKI-QGLVEEGCNVYRATNGEC 323 Query: 213 KFNPEKAVA----------------FVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTED 256 NP +VK+ + D+ ++ + P++ A T+ Sbjct: 324 --NPYHRCGSCWPNECFSLTNYTRYYVKDYGQVQGRDK--IMSEIKKGGPIACAIGATKK 379 Query: 257 F-MMYKSGVYSSNSCHKTPDKVNHAVLAVGYG-EQNGLLYWIVK 298 F Y GVYS K+ + NH + G+G ++NG+ YWI + Sbjct: 380 FEYEYVKGVYS----EKSDLESNHIISLTGWGVDENGVEYWIAR 419 >F15D4.4 CE28917 cysteine protease (HINXTON) TR:Q93512 protein_id:CAB02487.1 Length = 622 Score = 75.1 bits (183), Expect = 6e-14 Identities = 85/332 (25%), Positives = 130/332 (38%), Gaps = 51/332 (15%) Query: 25 VNAIEKFH--------FTSWMKQHQKTYSSREYSHRLQVFANNWRKIQAHNQRNH----T 72 ++ +EKF+ F S M +++E R V++ +++ HN + Sbjct: 119 LSPLEKFNEAMNNDGAFKSLMDVINFNSTAKEGLKRFNVYSKVKKEVDEHNIMYELGMSS 178 Query: 73 FKMGLNQFSDMSFAEIKHKYLWSEPQNCSAT------KSNYLRGTGPYPSSMDWRKKGNV 126 +KM NQFS E+ L + +AT S R T P ++DWR Sbjct: 179 YKMSTNQFSVALDGEVAPLTLNLDALTPTATVIPATISSRKKRDTEP---TVDWRP---F 232 Query: 127 VSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQL------VDCAQNFNNHGCQ 180 + P+ +Q CG CW FS +ES AI +L+ QQL VD N GC+ Sbjct: 233 LKPILDQSTCGGCWAFSMISMIESFFAIQGYNTSSLSVQQLLTCDTKVDSTYGLANVGCK 292 Query: 181 GGLPSQAFEYILYNKGIMGEDSYPYIGKNGQCK---FNPEKAVAFVKNVVNITLNDEAAM 237 GG A Y L P+ ++ C F P + + I+ N AA Sbjct: 293 GGYFQIAGSY-LEVSAARDASLIPFDLEDTSCDSSFFPPVVPTILLFDDGYISGNFTAAQ 351 Query: 238 -------VEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQN 290 +E P++ D Y GVY + C +NHAV+ VG+ + Sbjct: 352 LITMEQNIEDKVRKGPIAVGMAAGPDIYKYSEGVYDGD-CGTI---INHAVVIVGFTDD- 406 Query: 291 GLLYWIVKXXXXXXXXXXXYFLIER--GKNMC 320 YWI++ YF ++R GK+ C Sbjct: 407 ---YWIIRNSWGASWGEAGYFRVKRTPGKDPC 435 >Y71H2AM.3 CE26272 (ST.LOUIS) protein_id:AAK29976.1 Length = 716 Score = 73.9 bits (180), Expect = 1e-13 Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 32/176 (18%) Query: 92 YLWSEPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESA 151 + W P+ T +L DWR KG +V PVK+QG C + F+ + ++ES Sbjct: 70 FQWKTPKYTIQTTEEFL----------DWRDKG-IVGPVKDQGKCNASHAFAISSSIESM 118 Query: 152 VAIA-SGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNG 210 A A +G +++ +EQQL+DC + GC+ A Y +++ GI E YPY GK Sbjct: 119 YAKATNGSLLSFSEQQLIDC-DDHGFKGCEEQPAINAVSYFIFH-GIETEADYPYAGKE- 175 Query: 211 QCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYS 266 N L++E E V Y P F YK G+Y+ Sbjct: 176 -----------------NGKLSNETQGKELVTNYGPAFFTMRAPPSLYDYKIGIYN 214 >C32B5.13 CE08521 (ST.LOUIS) TR:P91110 protein_id:AAB37968.1 Length = 150 Score = 71.6 bits (174), Expect = 6e-13 Identities = 45/143 (31%), Positives = 73/143 (50%), Gaps = 10/143 (6%) Query: 159 MMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGK-NGQCKFNPE 217 +++ +EQQ++DC NF + CQ + S F + G++ E YPY+GK N +CK++ Sbjct: 10 VLSFSEQQIIDCG-NFTSP-CQENILSHEF---IKKNGVVTEADYPYVGKENEKCKYDEN 64 Query: 218 KAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYS--SNSCHKTPD 275 K + N++ + E + + + P F + F YK+G+YS C K D Sbjct: 65 KIKLWPTNMLLVGNLPETLLKLFIKEHGPGYFRMKAPPSFFNYKTGIYSPTQEECGKATD 124 Query: 276 KVNHAVLAVGYGEQNGLLYWIVK 298 ++ VGYG + G YWIVK Sbjct: 125 A--RSLTIVGYGIEGGQNYWIVK 145 Database: /data_2/jason/blastdb/wormpep62 Posted date: Sep 3, 2001 2:17 PM Number of letters in database: 8,813,425 Number of sequences in database: 20,085 Lambda K H 0.319 0.131 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5933049 Number of Sequences: 20085 Number of extensions: 243404 Number of successful extensions: 614 Number of sequences better than 1.0e-10: 17 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 568 Number of HSP's gapped (non-prelim): 17 length of query: 333 length of database: 8,813,425 effective HSP length: 46 effective length of query: 287 effective length of database: 7,889,515 effective search space: 2264290805 effective search space used: 2264290805 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 155 (64.3 bits) BLASTP 2.1.3 [Apr-11-2001] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= CATL_HUMAN (333 letters) Database: /data_2/jason/blastdb/wormpep62 20,085 sequences; 8,813,425 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value T03E6.7 CE16333 cathepsin-like protease (HINXTON) TR:O4573... 334 4e-92 F41E6.6 CE10254 cysteine protease and a protease inhibitor... 194 6e-50 R09F10.1 CE28755 peptidase (ST.LOUIS) TR:Q23030 protein_id... 176 2e-44 Y40H7A.10 CE21821 Cysteine protease (HINXTON) TR:Q9XWA4 pr... 133 1e-31 R07E3.1 CE02295 cysteine proteinase (HINXTON) TR:Q21810 pr... 130 1e-30 >T03E6.7 CE16333 cathepsin-like protease (HINXTON) TR:O45734 protein_id:CAB07275.1 Length = 337 Score = 334 bits (857), Expect = 4e-92 Identities = 164/341 (48%), Positives = 228/341 (66%), Gaps = 12/341 (3%) Query: 1 MNPTLILAAFCLGIASATLTFDHSLEA---QWTKWKAMHNRLYGMNEEGWRRAVWEKNMK 57 MN ++LA +A + +E+ +W +K ++ Y +EE + KNM Sbjct: 1 MNRFILLALVAAVVAVNSAKLSRQIESAIEKWDDYKEDFDKEYSESEEQTYMEAFVKNMI 60 Query: 58 MIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQ----NRKPRKGKVFQEPLFYE 113 IE HN+++R G+ +F M +N D+ ++R+ +NG++ + + + F P + Sbjct: 61 HIENHNRDHRLGRKTFEMGLNHIADLPFSQYRK-LNGYRRLFGDSRIKNSSSFLAPFNVQ 119 Query: 114 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ 173 P VDWR+ VT VKNQG CGSCWAFSATGALEGQ RK G+L+SLSEQNLVDCS Sbjct: 120 VPDEVDWRDTHLVTDVKNQGMCGSCWAFSATGALEGQHARKLGQLVSLSEQNLVDCSTKY 179 Query: 174 GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QE 232 GN GCNGGLMD AF+Y++DN G+D+EESYPY+ + C +N K A+D G+VD P+ E Sbjct: 180 GNHGCNGGLMDQAFEYIRDNHGVDTEESYPYKGRDMKCHFNKKTVGADDKGYVDTPEGDE 239 Query: 233 KALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDN 292 + L AVAT GPIS+AIDAGH SF YK+G+Y++ +CSSE++DHGVL+VGYG T+ ++ Sbjct: 240 EQLKIAVATQGPISIAIDAGHRSFQLYKKGVYYDEECSSEELDHGVLLVGYG---TDPEH 296 Query: 293 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333 YW+VKNSWG WG GY+++A++R NHCG+A+ ASYP V Sbjct: 297 GDYWIVKNSWGAGWGEKGYIRIARNRNNHCGVATKASYPLV 337 >F41E6.6 CE10254 cysteine protease and a protease inhibitor (ST.LOUIS) TR:O16454 protein_id:AAB65956.1 Length = 498 Score = 194 bits (493), Expect = 6e-50 Identities = 124/330 (37%), Positives = 171/330 (51%), Gaps = 53/330 (16%) Query: 36 HNRLYGMNEEGWRR-AVWEKNMKMI-ELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMN 93 H + Y E +R V++KN K+I EL E + FT F DMT+ EF+++M Sbjct: 181 HEKKYTNKREVLKRFRVFKKNAKVIRELQKNEQGTAVYGFTK----FSDMTTMEFKKIML 236 Query: 94 GFQNRKP-----------RKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFS 142 +Q +P + +E L P S DWREKG VT VKNQG CGSCWAFS Sbjct: 237 PYQWEQPVYPMEQANFEKHDVTINEEDL----PESFDWREKGAVTQVKNQGNCGSCWAFS 292 Query: 143 ATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQ----YVQDN----- 193 TG +EG F +L+SLSEQ LVDC ++GCNGGL A++ V DN Sbjct: 293 TTGNVEGAWFIAKNKLVSLSEQELVDCDSM--DQGCNGGLPSNAYKIGKFVVSDNYCFLV 350 Query: 194 ------------GGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVAT 241 GGL+ E++YPY+ E+C K G V++P E + K + T Sbjct: 351 FYHKTTKEIIRMGGLEPEDAYPYDGRGETCHLVRKDIAVYINGSVELPHDEVEMQKWLVT 410 Query: 242 VGPISVAIDAGHESFLFYKEGIY--FEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVK 299 GPIS+ ++A + FY+ G+ F+ C ++HGVL+VGYG + YW+VK Sbjct: 411 KGPISIGLNA--NTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYG----KDGRKPYWIVK 464 Query: 300 NSWGEEWGMGGYVKMAKDRRNHCGIASAAS 329 NSWG WG GY K+ + +N CG+ A+ Sbjct: 465 NSWGPNWGEAGYFKLYRG-KNVCGVQEMAT 493 >R09F10.1 CE28755 peptidase (ST.LOUIS) TR:Q23030 protein_id:AAC69091.2 Length = 383 Score = 176 bits (446), Expect = 2e-44 Identities = 113/309 (36%), Positives = 171/309 (54%), Gaps = 39/309 (12%) Query: 42 MNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR 101 + E +R ++ +N+ IE +E R + +N F D T EE ++++ Q K Sbjct: 96 VEEFEYRYQIFLRNV--IEFEAEEERN--LGLDLDVNEFTDWTDEELQKMV---QENKYT 148 Query: 102 KGKVFQEPLFYEA--------PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFR 153 K F P F + P S+DWRE+G +TP+KNQGQCGSCWAF+ ++E Q Sbjct: 149 KYD-FDTPKFEGSYLETGVIRPASIDWREQGKLTPIKNQGQCGSCWAFATVASVEAQNAI 207 Query: 154 KTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY 213 K G+L+SLSEQ +VDC G N GC+GG YA ++V++N GL+SE+ YPY A K+ Sbjct: 208 KKGKLVSLSEQEMVDCDG--RNNGCSGGYRPYAMKFVKEN-GLESEKEYPYSA----LKH 260 Query: 214 NPKYSVANDTG-FVD----IPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEP- 267 + + NDT F+D + E+ + V T GP++ ++ ++ Y+ GI F P Sbjct: 261 DQCFLKENDTRVFIDDFRMLSNNEEDIANWVGTKGPVTFGMNV-VKAMYSYRSGI-FNPS 318 Query: 268 --DCSSEDMD-HGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGI 324 DC+ + M H + ++GYG E + YW+VKNSWG WG GY ++A+ N CG+ Sbjct: 319 VEDCTEKSMGAHALTIIGYGGEG----ESAYWIVKNSWGTSWGASGYFRLARG-VNSCGL 373 Query: 325 ASAASYPTV 333 A+ P + Sbjct: 374 ANTVVAPII 382 >Y40H7A.10 CE21821 Cysteine protease (HINXTON) TR:Q9XWA4 protein_id:CAA22062.1 Length = 343 Score = 133 bits (335), Expect = 1e-31 Identities = 91/284 (32%), Positives = 146/284 (51%), Gaps = 28/284 (9%) Query: 48 RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107 R ++ +N+ ++E +N+E GK T +N F D+T EE+++ + KP + Sbjct: 71 RFTIFSRNLDLVERYNKE-DAGK--VTYELNDFSDLTEEEWKKYL---MTPKPDHSEKSL 124 Query: 108 EPLFY----EAPRSVDWRE---KGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLIS 160 +P P SVDWR +VT +K QG CGSCWAF+ A+E + G L S Sbjct: 125 KPKTLIDKKNLPNSVDWRNVNGTNHVTGIKYQGPCGSCWAFATAAAIESAVSISGGGLQS 184 Query: 161 LSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVA 220 LS Q L+DC+ ++ C GG A +Y Q + G+ + +YPY C+ +VA Sbjct: 185 LSSQQLLDCT--VVSDKCGGGEPVEALKYAQSH-GITTAHNYPYYFWTTKCRETVP-TVA 240 Query: 221 NDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLV 280 + ++ + E + + VA GP+ V + FY GI +PDC +E H ++V Sbjct: 241 RISSWMK-AESEDEMAQIVALNGPMIVCANFATNKNRFYHSGIAEDPDCGTEP-THALIV 298 Query: 281 VGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGI 324 +GYG + YW++KN++ + WG GY+++ +D N CGI Sbjct: 299 IGYGPD--------YWILKNTYSKVWGEKGYMRVKRD-VNWCGI 333 >R07E3.1 CE02295 cysteine proteinase (HINXTON) TR:Q21810 protein_id:CAA89070.1 Length = 402 Score = 130 bits (327), Expect = 1e-30 Identities = 89/265 (33%), Positives = 130/265 (48%), Gaps = 27/265 (10%) Query: 78 NAFGDMTSEEFRQVM--NGFQNRKPRKGKVFQEPLFYEA-----------PRSVDWREKG 124 N D T EEF + + F R ++ + F EP+ P DWR+K Sbjct: 138 NDMSDWTDEEFEKTLLPKSFYKRLHKEAE-FIEPIPESLTAKKGESSSPFPDFFDWRDKN 196 Query: 125 YVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMD 184 +TPVK QGQCGSCWAF++T +E G +LSEQ L+DC + C+GG D Sbjct: 197 VITPVKAQGQCGSCWAFASTATVEAAWAIAHGEKRNLSEQTLLDCD--LVDNACDGGDED 254 Query: 185 YAFQYVQDNGGLDSEESYPYEA-TEESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVG 243 AF+Y+ N GL + PY A + C N ++ + E +++ + G Sbjct: 255 KAFRYIHRN-GLANAVDLPYVAHRQNGCAVNDHWNTTRIKAAYFLHHDEDSIINWLVNFG 313 Query: 244 PISVAIDAGHESFLFYKEGIY--FEPDCSSEDMD-HGVLVVGYGFESTESDNNKYWLVKN 300 P+++ + A + YK G++ E C +E + H +L+ GYG T KYW+VKN Sbjct: 314 PVNIGM-AVIQPMRAYKGGVFTPSEYACKNEVIGLHALLITGYG---TSKTGEKYWIVKN 369 Query: 301 SWGEEWGM-GGYVKMAKDRRNHCGI 324 SWG WG+ GY+ A+ N CGI Sbjct: 370 SWGNTWGVEHGYIYFARG-INACGI 393 >Y51A2D.8 CE19204 Cysteine proteases (2 domains) (HINXTON) TR:Q9XXQ7 protein_id:CAA16407.1 Length = 386 Score = 123 bits (308), Expect = 2e-28 Identities = 87/322 (27%), Positives = 145/322 (45%), Gaps = 39/322 (12%) Query: 32 WKAMHNRLYGMNEEGWRRAV-WEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQ 90 +K +NR Y E +R + K+ ++ N + + + +N F D+++ EF Sbjct: 46 FKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFGINKFSDLSTAEFHG 105 Query: 91 VMNG-------------FQNRKP-----------RKGKVFQEPLFYEAPRSVDWREKGYV 126 ++ F +KP K + + P +++ R+ + V Sbjct: 106 RLSNVVPSNNTGLPMLNFDKKKPDFRAADMNKTRHKRRSTRYPDYFDL-RNEKINGRYIV 164 Query: 127 TPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYA 186 P+K+QGQC CW F+ T +E +G+ SLS+Q + DC G +G GC GG + Sbjct: 165 GPIKDQGQCACCWGFAVTALVETVYAAHSGKFKSLSDQEVCDC-GTEGTPGCKGGSLTLG 223 Query: 187 FQYVQDNGGLDSEESYPYEATEES----CKYNPKYSVANDTGF---VDIPKQEKALMKAV 239 QYV+ GL +E YPY+ + C+ + F V P++ + + V Sbjct: 224 VQYVK-KYGLSGDEDYPYDQNRANQGRRCRLRETDRIVPARAFNFAVINPRRAEEQIIQV 282 Query: 240 ATVG--PISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYG-FESTESDNNKYW 296 T P++V G + F YKEG+ E DC H +VGY E + ++ YW Sbjct: 283 LTEWKVPVAVYFKVG-DQFKEYKEGVIIEDDCRRATQWHAGAIVGYDTVEDSRGRSHDYW 341 Query: 297 LVKNSWGEEWGMGGYVKMAKDR 318 ++KNSWG +W GYV++ + R Sbjct: 342 IIKNSWGGDWAESGYVRVVRGR 363 >K02E7.10 CE11640 protease (ST.LOUIS) TR:O17255 protein_id:AAB71030.1 Length = 299 Score = 119 bits (298), Expect = 3e-27 Identities = 73/219 (33%), Positives = 112/219 (50%), Gaps = 14/219 (6%) Query: 118 VDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFR-KTGRLISLSEQNLVDCSGPQGNE 176 +DWREKG V PVK+QG+C + +AF+A A+E + G+L+S SEQ ++DC+ Sbjct: 84 LDWREKGIVGPVKDQGKCNASYAFAAIAAIESMYAKANNGKLLSFSEQQIIDCA--NFTN 141 Query: 177 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEE--SCKYNPKYSVANDTGFVDIPKQEKA 234 C L + G+ +E YPY E C+Y+ T ++D+ E+ Sbjct: 142 PCQENLENVLSNRFLKENGVGTEADYPYVGKENVGKCEYDSSKMKLRPT-YIDVYPNEEW 200 Query: 235 LMKAVATVGPISVAIDAGHESFLFYKEGIY--FEPDCSSEDMDHGVLVVGYGFESTESDN 292 + T G + SF YK GIY + +C + + + +VGYG + E Sbjct: 201 ARAHITTFGTGYFRM-RSPPSFFHYKTGIYNPTKEECGNANEARSLAIVGYGKDGAE--- 256 Query: 293 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYP 331 KYW+VK S+G WG GY+K+A++ N CG+A + S P Sbjct: 257 -KYWIVKGSFGTSWGEHGYMKLARN-VNACGMAESISIP 293 >Y71H2AR.2 CE22930 (ST.LOUIS) protein_id:AAK29985.1 Length = 345 Score = 119 bits (297), Expect = 3e-27 Identities = 79/219 (36%), Positives = 115/219 (52%), Gaps = 12/219 (5%) Query: 118 VDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKT-GRLISLSEQNLVDCSGPQGNE 176 +DWREKG V PVK+QG+C + AF+ T ++E + T G L+S SEQ L+DC+ QG + Sbjct: 86 LDWREKGIVGPVKDQGKCNASHAFAITSSIESMYAKATNGTLLSFSEQQLIDCN-DQGYK 144 Query: 177 GCNGGLMDYAFQYVQDNGGLDSEESYPY-EATEESCKYNPKYSVANDTGFVDIPKQEKAL 235 GC A Y+ + G+++E YPY + T E C ++ S + V E Sbjct: 145 GCEEQFAMNAIGYLATH-GIETEADYPYVDKTNEKCTFDSTKSKIHLKKGVVAEGNEVLG 203 Query: 236 MKAVATVGPISVAIDAGHESFLFYKEGIYFE--PDCSSEDMDHGVLVVGYGFESTESDNN 293 V GP + A S YK GIY +C+S +++VGYG E + Sbjct: 204 KVYVTNYGPAFFTMRA-PPSLYDYKIGIYNPSIEECTSTHEIRSMVIVGYGIEGEQ---- 258 Query: 294 KYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPT 332 KYW+VK S+G WG GY+K+A+D N C +A+ + T Sbjct: 259 KYWIVKGSFGTSWGEQGYMKLARD-VNACAMATTIAVLT 296 >Y51A2D.1 CE18411 Cysteine proteases (2 domains) (HINXTON) TR:O62484 protein_id:CAA16404.1 Length = 382 Score = 105 bits (262), Expect = 4e-23 Identities = 95/353 (26%), Positives = 148/353 (41%), Gaps = 76/353 (21%) Query: 28 QWTKWKAMHNRLYGMNEEGWRRA---VWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMT 84 ++ ++K +R Y E R V +N ++ L+ + G++S A+N F D+T Sbjct: 43 EFVEFKKKFSRTYKSEAENQLRLQNFVKSRN-NVVRLNKNAQKAGRNS-NFAVNQFSDLT 100 Query: 85 SEEFRQVMNGF-----------QNRKPRKGKVFQEPLFYEAPRSVDWREKGY-----VTP 128 + E Q ++ F +N K GK + E R+ D R + V P Sbjct: 101 TSELHQRLSRFPPNLTENSVFHKNFKKLLGKTRTKRQNSEFARNFDLRSQKVNGRYIVGP 160 Query: 129 VKNQGQCGSCWAFSATGALEG------------------------------QMFRKTGRL 158 +KNQGQC CW F+ T LE + K Sbjct: 161 IKNQGQCACCWGFAVTAMLETIYAVNVGRFKLMSHIPALAPNFSDFDFFFFEFLAKLNMF 220 Query: 159 ISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYS 218 +S S+Q + DC+ GC GG + + +Y +N GL SE YP + + + Sbjct: 221 LSFSDQEMCDCATDGTKAGCAGGGLMWGVEYAINN-GLASEFDYPEFDQNRATRPGTCEA 279 Query: 219 VANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS-SEDMDHG 277 + +D T P++ A AG +FL YK G+ DC + + H Sbjct: 280 MDDD-----------------KTFPPVNFA--AG-TAFLQYKSGVLVTEDCDLAGTVWHA 319 Query: 278 VLVVGYGFES-TESDNNKYWLVKNSWG-EEWGMGGYVKMAKDRRNHCGIASAA 328 +VGYG E+ + ++W++KNSWG WG GGYVK+ + +N CGI A Sbjct: 320 GAIVGYGEENDLRGRSQRFWIMKNSWGVSGWGTGGYVKLIRG-KNWCGIERGA 371 >F26E4.3 CE17714 cysteine protease (HINXTON) TR:P90850 protein_id:CAB03007.1 Length = 491 Score = 100 bits (250), Expect = 1e-21 Identities = 73/245 (29%), Positives = 110/245 (44%), Gaps = 35/245 (14%) Query: 113 EAPRSVDWREKG--YVTPVKNQGQCGSCWAFSATGALEGQM-FRKTGRLIS-LSEQNLVD 168 E P D R+K + PV +QG CGS W+ S T ++ GR+ S LS Q L+ Sbjct: 222 ELPEHFDARDKWGPLIHPVADQGDCGSSWSVSTTAISSDRLAIISEGRINSTLSSQQLLS 281 Query: 169 CSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPY---EATEESCKYNPKYSVANDTGF 225 C+ + +GC GG +D A+ Y++ G + + YPY ++ E PK N G Sbjct: 282 CNQHR-QKGCEGGYLDRAWWYIRKLGVV-GDHCYPYVSGQSREPGHCLIPKRDYTNRQGL 339 Query: 226 -----------------VDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPD 268 + +E+ + + T GP+ HE F Y G+Y D Sbjct: 340 RCPSGSQDSTAFKMTPPYKVSSREEDIQTELMTNGPVQATFVV-HEDFFMYAGGVYQHSD 398 Query: 269 CSSE-------DMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNH 321 +++ + H V V+G+G + + KYWL NSWG +WG GY K+ + NH Sbjct: 399 LAAQKGASSVAEGYHSVRVLGWGVDHSTGKPIKYWLCANSWGTQWGEDGYFKVLRG-ENH 457 Query: 322 CGIAS 326 C I S Sbjct: 458 CEIES 462 >Y113G7B.15 CE23295 (HINXTON) TR:Q9U2X1 protein_id:CAB54334.1 Length = 328 Score = 100 bits (248), Expect = 2e-21 Identities = 92/317 (29%), Positives = 130/317 (40%), Gaps = 37/317 (11%) Query: 44 EEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNG--------- 94 E+ R A + KN + I+ N + R + T N F D +E + Sbjct: 12 EKDRRLAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNRQELSARNSKIHPKNHTDL 71 Query: 95 --FQNRKPRKGKVFQEPLFY----EAPRSVDWRE-----KGYVTPVKNQGQCGSCWAFSA 143 ++ R PR + + P D R+ V PVK+Q QCG CWAF+ Sbjct: 72 PIYKPRHPRGSRNHHNKRSKRQSGDIPDYFDLRDIYVDGSPVVGPVKDQEQCGCCWAFAT 131 Query: 144 TGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYP 203 T E + SLS+Q + DC+ GC GG + V G S+ YP Sbjct: 132 TAITEAANTLYSKSFTSLSDQEICDCADSGDTPGCVGGDPRNGLKMVHLR-GQSSDGDYP 190 Query: 204 YEA----TEESCKYNPKYSV-----ANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHE 254 YE T +C + K +V N F +E + P +V G E Sbjct: 191 YEEYRANTTGNCVGDEKSTVIQPETLNVYRFDQDYAEEDIMENLYLNHIPTAVYFRVG-E 249 Query: 255 SFLFYKEGIYFEPDC--SSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV 312 +F +Y G+ DC + H V +VGYG T D YWLV+NSW +WG+ GYV Sbjct: 250 NFEWYTSGVLQSEDCYQMTPAEWHSVAIVGYG---TSDDGVPYWLVRNSWNSDWGLHGYV 306 Query: 313 KMAKDRRNHCGIASAAS 329 K+ + N C I S A+ Sbjct: 307 KIRRG-VNWCLIESHAA 322 >F15D4.4 CE28917 cysteine protease (HINXTON) TR:Q93512 protein_id:CAB02487.1 Length = 622 Score = 97.8 bits (242), Expect = 8e-21 Identities = 77/296 (26%), Positives = 127/296 (42%), Gaps = 39/296 (13%) Query: 44 EEGWRRA-VWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRK 102 +EG +R V+ K K ++ HN Y G S+ M+ N F E + P Sbjct: 149 KEGLKRFNVYSKVKKEVDEHNIMYELGMSSYKMSTNQFSVALDGEVAPLTLNLDALTPTA 208 Query: 103 GKV---FQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLI 159 + + +VDWR ++ P+ +Q CG CWAFS +E + Sbjct: 209 TVIPATISSRKKRDTEPTVDWRP--FLKPILDQSTCGGCWAFSMISMIESFFAIQGYNTS 266 Query: 160 SLSEQNLVDCSGP------QGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCK- 212 SLS Q L+ C N GC GG A Y++ + D+ P++ + SC Sbjct: 267 SLSVQQLLTCDTKVDSTYGLANVGCKGGYFQIAGSYLEVSAARDA-SLIPFDLEDTSCDS 325 Query: 213 ------------YNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYK 260 ++ Y N T I ++ ++ GPI+V + AG + + Y Sbjct: 326 SFFPPVVPTILLFDDGYISGNFTAAQLITMEQN--IEDKVRKGPIAVGMAAGPDIYK-YS 382 Query: 261 EGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAK 316 EG+Y + DC + ++H V++VG+ + YW+++NSWG WG GY ++ + Sbjct: 383 EGVY-DGDCGT-IINHAVVIVGF--------TDDYWIIRNSWGASWGEAGYFRVKR 428 >C50F4.3 CE05468 thiol protease (HINXTON) TR:Q18740 protein_id:CAA94738.1 Length = 374 Score = 94.4 bits (233), Expect = 9e-20 Identities = 80/292 (27%), Positives = 125/292 (42%), Gaps = 36/292 (12%) Query: 63 NQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQ-----------NRKPRKGKVFQEPLF 111 N+ ++ H +N F D++ +E + + F N K + K E L Sbjct: 82 NKAAKKAGHDTKYGINKFSDLSKKEIHGMYSKFGPPKNNTNVPKFNLKNLRVKRQMEGL- 140 Query: 112 YEAPRSVDWREKGY-----VTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNL 166 P++ D R K + P+K Q C CW F+AT E + + ++LSEQ + Sbjct: 141 ---PKTFDLRNKKVGGHYIIGPIKTQDSCACCWGFAATAVAEAALTVHLKKAMNLSEQEV 197 Query: 167 VDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATE-------ESCKYNPKYS- 218 DC+ P+ GCNGG +Y+++ GL + YP+ ES KY+ + + Sbjct: 198 CDCA-PKHGPGCNGGDPVDGLEYIKEM-GLTGGKEYPFNVNRSTQLGRCESEKYDRELNP 255 Query: 219 VANDTGFVDIPKQEKALMKAVATVG-PISVAIDAGHESFLFYKEGIYFEPDCSSEDMD-- 275 + D +D E + + + PISVA G S Y GI DC E Sbjct: 256 LELDYYAIDPFNAEYQMTHHLYLLNLPISVAFRTG-ASLSSYLSGILELADCDDEKGGHW 314 Query: 276 HGVLVVGYGFESTESDNN-KYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIAS 326 H +VGYG + YW+ +NSW +WG GY ++ + + C I S Sbjct: 315 HSGAIVGYGTTKNSAGRTVDYWIFRNSWWTDWGDDGYARIVRG-EDWCSIES 365 >C32B5.7 CE08515 cathepsin-like peptidase (ST.LOUIS) TR:P91111 protein_id:AAB37963.1 Length = 250 Score = 94.0 bits (232), Expect = 1e-19 Identities = 63/191 (32%), Positives = 100/191 (51%), Gaps = 18/191 (9%) Query: 118 VDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEG 177 +DWR++G V PVK+QG C + +AF+A A+E G+L+S SEQ ++DC G E Sbjct: 72 LDWRDEGVVGPVKDQGNCNASYAFAAISAIESMYAIANGQLLSFSEQQIIDCLGGCAIES 131 Query: 178 CNGGLMDYAFQYVQDNGGLDSEESYPYEATE-ESCKYNPK--YSVANDTGFVDIPKQEKA 234 M Y + G+++ YP+ + E C+Y+ K Y + +DT D+ + A Sbjct: 132 DPMMAMTYL-----ERKGIETYTDYPFVGKKNEKCEYDSKKAYLILDDT--YDMSDESLA 184 Query: 235 LMKAVATVGPISVAIDAGHESFLFYKEGIY--FEPDCSSEDMDHGVLVVGYGFESTESDN 292 L+ + GP ++ SF YK GIY E +C S + + +VGYG + ++ Sbjct: 185 LV-FIDERGPGLFTMNT-PPSFFNYKSGIYNPTEEECKSTNEKRALTIVGYGNDKGQN-- 240 Query: 293 NKYWLVKNSWG 303 YW+VK S+G Sbjct: 241 --YWIVKGSFG 249 >M04G12.2 CE12424 cysteine protease (HINXTON) TR:P92005 protein_id:CAB03209.1 Length = 467 Score = 92.0 bits (227), Expect = 4e-19 Identities = 82/288 (28%), Positives = 133/288 (45%), Gaps = 45/288 (15%) Query: 66 YREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRK-GKVFQE---PLFYEA------- 114 Y E + M++ + +SEE+ + + +K GKVF+ P +E+ Sbjct: 161 YYEPNDEALVDMSSESEESSEEWEEARPYLKCGCLKKSGKVFESKTAPREWESSSFKSND 220 Query: 115 -PRSVDWREKG---YVTPVKNQG---QCGSCWAFSATGALEGQM-FRKTGR--LISLSEQ 164 P DWR Y +P +NQ CGSCW F TGAL + + GR + LS Q Sbjct: 221 LPTGWDWRNVSGVNYCSPTRNQHIPVYCGSCWVFGTTGALNDRFNVARKGRWPMTQLSPQ 280 Query: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEE---------SCKYNP 215 ++DC+G +GN C GG + ++ + G L E Y AT SC N Sbjct: 281 EIIDCNG-KGN--CQGGEIGNVLEHAKIQG-LVEEGCNVYRATNGECNPYHRCGSCWPNE 336 Query: 216 KYSVANDTGFV-----DIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 270 +S+ N T + + ++K +M + GPI+ AI A + Y +G+Y E S Sbjct: 337 CFSLTNYTRYYVKDYGQVQGRDK-IMSEIKKGGPIACAIGATKKFEYEYVKGVYSEK--S 393 Query: 271 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 318 + +H + + G+G + + +YW+ +NSWGE WG G+ ++ + Sbjct: 394 DLESNHIISLTGWG---VDENGVEYWIARNSWGEAWGELGWFRVVTSK 438 >C52E4.1 CE08943 locus:cpr-1 cathepsin-like cysteine protease (HINXTON) TR:Q18783 protein_id:CAB01410.1 Length = 340 Score = 88.6 bits (218), Expect = 5e-18 Identities = 66/251 (26%), Positives = 104/251 (41%), Gaps = 37/251 (14%) Query: 107 QEPLFYEAPRSVD----WREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKT--GRLIS 160 QE + P + D W E + +++Q CGSCWAF A + + +T + Sbjct: 89 QEVVLASVPATFDSRTQWSECKSIKLIRDQATCGSCWAFGAAEMISDRTCIETKGAQQPI 148 Query: 161 LSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESY-----PYE---------- 205 +S +L+ C G GC GG A ++ G + + + PY Sbjct: 149 ISPDDLLSCCGSSCGNGCEGGYPIQALRWWDSKGVVTGGDYHGAGCKPYPIAPCTSGNCP 208 Query: 206 -----ATEESCKYNPKYSVANDTGF----VDIPKQEKALMKAVATVGPISVAIDAGHESF 256 + SC+ + A D F +PK ++ + GP+ A +E F Sbjct: 209 ESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKNAASIQAEIYANGPVEAAFSV-YEDF 267 Query: 257 LFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAK 316 YK G+Y + H + ++G+G ES + YWLV NSWG WG G+ K+ + Sbjct: 268 YKYKSGVY-KHTAGKYLGGHAIKIIGWGTES----GSPYWLVANSWGVNWGESGFFKIYR 322 Query: 317 DRRNHCGIASA 327 + CGI SA Sbjct: 323 G-DDQCGIESA 332 >F32B5.8 CE09855 cysteine proteinase (ST.LOUIS) TR:O01850 protein_id:AAB54210.1 Length = 427 Score = 88.2 bits (217), Expect = 6e-18 Identities = 85/288 (29%), Positives = 130/288 (44%), Gaps = 54/288 (18%) Query: 75 MAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLF---YEA--------PRSVDWREK 123 +A +A+G + R N + + G+VF+ + YE P++ DWR+ Sbjct: 137 LASSAYGKVRKYSNRNRYN-LKGCYKQTGRVFEHKRYDRIYETEDFDSEDLPKTWDWRDA 195 Query: 124 G---YVTPVKNQG---QCGSCWAFSATGALEGQMFRKTGRL---ISLSEQNLVDCSGP-- 172 Y + +NQ CGSCWAF AT AL ++ K LS Q ++DCSG Sbjct: 196 NGINYASADRNQHIPQYCGSCWAFGATSALADRINIKRKNAWPQAYLSVQEVIDCSGAGT 255 Query: 173 --QGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCK-YN-------------PK 216 G E GG+ YA ++ G+ E Y+A + C YN Sbjct: 256 CVMGGEP--GGVYKYAHEH-----GIPHETCNNYQARDGKCDPYNRCGSCWPGECFSIKN 308 Query: 217 YSVANDTGFVDIPKQEKALMKA-VATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD 275 Y++ + + + EK MKA + GPI+ I A ++F Y GIY E + ED+D Sbjct: 309 YTLYKVSEYGTVHGYEK--MKAEIYHKGPIACGI-AATKAFETYAGGIYKE--VTDEDID 363 Query: 276 HGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCG 323 H + V G+G + +YW+ +NSWGE WG G+ K+ + + G Sbjct: 364 HIISVHGWGVD--HESGVEYWIGRNSWGEPWGEHGWFKIVTSQYKNAG 409 >F57F5.1 CE05999 cysteine protease (HINXTON) TR:Q20950 protein_id:CAB00098.1 Length = 400 Score = 85.9 bits (211), Expect = 3e-17 Identities = 72/280 (25%), Positives = 114/280 (40%), Gaps = 51/280 (18%) Query: 89 RQVMNGFQNRKPRKGKVFQ--EPLFYEA--PRSVD----WREKGYVTPVKNQGQCGSCWA 140 +Q+M P + +VF+ P +A P S D W ++ +++Q CGSCWA Sbjct: 117 KQLMGAKMVEIPEEYRVFEMTHPEVEDAAVPDSFDSRTAWPNCPSISKIRDQSSCGSCWA 176 Query: 141 FSATGALEGQ--MFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQY--------- 189 SA + + + ++S+S ++ C G GCNGG A+++ Sbjct: 177 VSAAETISDRICIASNAKTILSISADDINACCGMVCGNGCNGGYPIEAWRHYVKKGYVTG 236 Query: 190 --VQDNGGLD-------------------SEESYPYEATEESCKYNPKYSVANDTGF--- 225 QD G YP + E SC+ + D F Sbjct: 237 GSYQDKTGCKPYPYPPCEHHVNGTHYKPCPSNMYPTDKCERSCQAGYALTYQQDLHFGQS 296 Query: 226 -VDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYG 284 + K+ + K + T GP+ VA +E F Y G+Y +S H V ++G+G Sbjct: 297 AYAVSKKAAEIQKEIMTHGPVEVAFTV-YEDFEHYSGGVYVHTAGASLG-GHAVKMLGWG 354 Query: 285 FESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGI 324 + + YWL NSW E+WG GY ++ + N CGI Sbjct: 355 VD----NGTPYWLCANSWNEDWGENGYFRIIRG-VNECGI 389 >T10H4.12 CE27590 locus:cpr-3 protease (HINXTON) TR:Q9TW93 protein_id:CAB61024.2 Length = 370 Score = 77.4 bits (189), Expect = 1e-14 Identities = 80/345 (23%), Positives = 131/345 (37%), Gaps = 76/345 (22%) Query: 12 LGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKH 71 +G + + DH Q T W A HN + + +E K++++ Sbjct: 27 IGQSPQKVLVDHVNTVQ-TSWVAEHNEI----------SEFEMKFKVMDV---------- 65 Query: 72 SFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDWREK----GYVT 127 F + D+ SE F +G++ EPL P + D REK + Sbjct: 66 KFAEPLEKDSDVASELFV------------RGEIVPEPL----PDTFDAREKWPDCNTIK 109 Query: 128 PVKNQGQCGSCWAFSATGALEGQMFRKTG--RLISLSEQNLVDCSGPQGNEGCNGGLMDY 185 ++NQ CGSCWAF A + ++ ++ + +S ++++ C G GC GG Sbjct: 110 LIRNQATCGSCWAFGAAEVISDRVCIQSNGTQQPVISVEDILSCCGTTCGYGCKGGYSIE 169 Query: 186 AFQYVQDNGGLDSEE-----SYPY----------EATEESCK-----------YNPKYSV 219 A ++ +G + + PY E+T SCK Y Sbjct: 170 ALRFWASSGAVTGGDYGGHGCMPYSFAPCTKNCPESTTPSCKTTCQSSYKTEEYKKDKHY 229 Query: 220 ANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVL 279 V K + + GP+ + +E F YK G+Y H V Sbjct: 230 GASAYKVTTTKSVTEIQTEIYHYGPVEASYKV-YEDFYHYKSGVYHYTSGKLVG-GHAVK 287 Query: 280 VVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGI 324 ++G+G E + YWL+ NSWG +G G+ K+ + N C I Sbjct: 288 IIGWGVE----NGVDYWLIANSWGTSFGEKGFFKIRRG-TNECQI 327 >F36D3.9 CE15973 cysteine protease (HINXTON) TR:O45466 protein_id:CAB04322.1 Length = 345 Score = 77.0 bits (188), Expect = 1e-14 Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 36/245 (14%) Query: 109 PLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLIS--LSEQNL 166 PL ++A W + + ++ Q CGSCWAFS + + + +S +L Sbjct: 102 PLNFDA--RTRWPQCKSMKLIREQSNCGSCWAFSTAEVISDRTCIASNGTQQPIISPTDL 159 Query: 167 VDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEE-------SYPYEATEE---------- 209 + C G EGC+GG AFQ+ G + + YP Sbjct: 160 LTCCGMSCGEGCDGGFPYRAFQWWARRGVVTGGDYLGTGCKPYPIRPCNSDNCVNLQTPP 219 Query: 210 ---SCKYNPKYSVANDTGF-----VDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKE 261 SC+ + + ND + +P+ A+ + GP+ VA +E F YK Sbjct: 220 CRLSCQPGYRTTYTNDKNYGSNSAYPVPRTVAAIQADIYYNGPV-VAAFIVYEDFEKYKS 278 Query: 262 GIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNH 321 GIY S+ H V ++G+G E YWL NSWG +WG G ++ + + Sbjct: 279 GIYRHIAGRSKG-GHAVKLIGWGTER----GTPYWLAVNSWGSQWGESGTFRILRG-VDE 332 Query: 322 CGIAS 326 CGI S Sbjct: 333 CGIES 337 >C25B8.3 CE04078 locus:cpr-6 (ST.LOUIS) protein_id:AAK39189.1 Length = 379 Score = 77.0 bits (188), Expect = 1e-14 Identities = 67/255 (26%), Positives = 106/255 (41%), Gaps = 49/255 (19%) Query: 113 EAPRSVD----WREKGYVTPVKNQGQCGSCWAFSATGALEGQM-FRKTGRL-ISLSEQNL 166 + P S D W + + +++Q CGSCWAF A A+ ++ G L ++LS +L Sbjct: 104 DIPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFGAVEAMSDRICIASHGELQVTLSADDL 163 Query: 167 VDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSE--------ESYPYEATEESCKYN---- 214 + C G GCNGG A++Y +G + + YP+ E K Sbjct: 164 LSCCKSCGF-GCNGGDPLAAWRYWVKDGIVTGSNYTANNGCKPYPFPPCEHHSKKTHFDP 222 Query: 215 --------PKYSVANDTGFVDIPKQE---------------KALMKAVATVGPISVAIDA 251 PK + + D E +A+ K + T GP+ +A + Sbjct: 223 CPHDLYPTPKCEKKCVSDYTDKTYSEDKFFGASAYGVKDDVEAIQKELMTHGPLEIAFEV 282 Query: 252 GHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGY 311 +E FL Y G+Y H V ++G+G + D YW V NSW +WG G+ Sbjct: 283 -YEDFLNYDGGVYVHTG-GKLGGGHAVKLIGWGID----DGIPYWTVANSWNTDWGEDGF 336 Query: 312 VKMAKDRRNHCGIAS 326 ++ + + CGI S Sbjct: 337 FRILRG-VDECGIES 350 >W07B8.4 CE14680 thiol protease (ST.LOUIS) TR:O16288 protein_id:AAB65345.1 Length = 335 Score = 75.9 bits (185), Expect = 3e-14 Identities = 66/249 (26%), Positives = 99/249 (39%), Gaps = 47/249 (18%) Query: 120 WREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLIS--LSEQNLVDCSGPQGN-- 175 W + V +++Q CGSCWA +A A+ + + ++ LS ++++ C + N Sbjct: 83 WPQCISVNNIRDQSHCGSCWAVAAAEAISDRTCIASNGDVNTLLSAEDILTCCTGKFNCG 142 Query: 176 EGCNGGLMDYAFQYVQDNG---GLDSEESY---PYEAT---------------------- 207 +GC GG A++Y NG G E Y PY Sbjct: 143 DGCEGGYPIQAWRYWVKNGLVTGGSFESQYGCKPYSIAPCGETIDGVTWPECPMKISDTP 202 Query: 208 --EESCKYNPKYSVAND------TGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFY 259 E C N Y + D I + K + + GP+ V +E F Y Sbjct: 203 KCEHHCTGNNSYPIPYDQDKHFGASAYAIGRSAKQIQTEILAHGPVEVGFIV-YEDFYLY 261 Query: 260 KEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR 319 K GIY E H V ++G+G ++ YWL NSW WG GY ++ + Sbjct: 262 KTGIYTHV-AGGELGGHAVKMLGWGVDN----GTPYWLAANSWNTVWGEKGYFRILRG-V 315 Query: 320 NHCGIASAA 328 + CGI SAA Sbjct: 316 DECGIESAA 324 >Y71H2AM.3 CE26272 (ST.LOUIS) protein_id:AAK29976.1 Length = 716 Score = 68.6 bits (166), Expect = 5e-12 Identities = 55/168 (32%), Positives = 81/168 (47%), Gaps = 23/168 (13%) Query: 118 VDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKT-GRLISLSEQNLVDCSGPQGNE 176 +DWR+KG V PVK+QG+C + AF+ + ++E + T G L+S SEQ L+DC G + Sbjct: 86 LDWRDKGIVGPVKDQGKCNASHAFAISSSIESMYAKATNGSLLSFSEQQLIDCD-DHGFK 144 Query: 177 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALM 236 GC A Y + G+++E YPY E ++N+T Q K L Sbjct: 145 GCEEQPAINAVSYFIFH-GIETEADYPYAGKENG-------KLSNET-------QGKEL- 188 Query: 237 KAVATVGPISVAIDAGHESFLFYKEGIYFE--PDCSSEDMDHGVLVVG 282 V GP + A S YK GIY +C+S +++VG Sbjct: 189 --VTNYGPAFFTMRA-PPSLYDYKIGIYNPSIEECTSTHEIRSMVIVG 233 Database: /data_2/jason/blastdb/wormpep62 Posted date: Sep 3, 2001 2:17 PM Number of letters in database: 8,813,425 Number of sequences in database: 20,085 Lambda K H 0.317 0.133 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6230268 Number of Sequences: 20085 Number of extensions: 270881 Number of successful extensions: 651 Number of sequences better than 1.0e-10: 23 Number of HSP's better than 0.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 588 Number of HSP's gapped (non-prelim): 27 length of query: 333 length of database: 8,813,425 effective HSP length: 45 effective length of query: 288 effective length of database: 7,909,600 effective search space: 2277964800 effective search space used: 2277964800 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 155 (64.3 bits) BLASTP 2.1.3 [Apr-11-2001] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= CATL_RAT (334 letters) Database: /data_2/jason/blastdb/wormpep62 20,085 sequences; 8,813,425 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value T03E6.7 CE16333 cathepsin-like protease (HINXTON) TR:O4573... 325 2e-89 F41E6.6 CE10254 cysteine protease and a protease inhibitor... 203 1e-52 R09F10.1 CE28755 peptidase (ST.LOUIS) TR:Q23030 protein_id... 192 2e-49 R07E3.1 CE02295 cysteine proteinase (HINXTON) TR:Q21810 pr... 139 2e-33 Y40H7A.10 CE21821 Cysteine protease (HINXTON) TR:Q9XWA4 pr... 131 5e-31 >T03E6.7 CE16333 cathepsin-like protease (HINXTON) TR:O45734 protein_id:CAB07275.1 Length = 337 Score = 325 bits (834), Expect = 2e-89 Identities = 159/311 (51%), Positives = 208/311 (66%), Gaps = 9/311 (2%) Query: 28 QWHQWKSTHRRLYGTNEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEE 87 +W +K + Y +EE+ + KNM I+ HN ++ G+ F M +N D+ + Sbjct: 31 KWDDYKEDFDKEYSESEEQTYMEAFVKNMIHIENHNRDHRLGRKTFEMGLNHIADLPFSQ 90 Query: 88 FRQIVNGYRH----QKHKKGRLFQEPLMLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSA 143 +R++ NGYR + K F P +Q+P VDWR+ VT VKNQG CGSCWAFSA Sbjct: 91 YRKL-NGYRRLFGDSRIKNSSSFLAPFNVQVPDEVDWRDTHLVTDVKNQGMCGSCWAFSA 149 Query: 144 SGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYP 203 +G LEGQ K G+L+SLSEQNLVDCS GN GCNGGLMD AF+YI++N G+D+EESYP Sbjct: 150 TGALEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRDNHGVDTEESYP 209 Query: 204 YEAKDGSCKYRAEYAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSSG 262 Y+ +D C + + A+D G+VD P+ E+ L AVAT GPIS+A+DA H S Q Y G Sbjct: 210 YKGRDMKCHFNKKTVGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGHRSFQLYKKG 269 Query: 263 IYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHC 322 +YY+ CSS++LDHGVL+VGY GTD YW+VKNSWG WG GYI+IA++RNNHC Sbjct: 270 VYYDEECSSEELDHGVLLVGY---GTDPEHGDYWIVKNSWGAGWGEKGYIRIARNRNNHC 326 Query: 323 GLATAASYPIV 333 G+AT ASYP+V Sbjct: 327 GVATKASYPLV 337 >F41E6.6 CE10254 cysteine protease and a protease inhibitor (ST.LOUIS) TR:O16454 protein_id:AAB65956.1 Length = 498 Score = 203 bits (516), Expect = 1e-52 Identities = 122/331 (36%), Positives = 183/331 (54%), Gaps = 45/331 (13%) Query: 36 HRRLYGTNEEEWRR-AVWEKNMRMI-QLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVN 93 H + Y E +R V++KN ++I +L E +GFT F DMT EF++I+ Sbjct: 181 HEKKYTNKREVLKRFRVFKKNAKVIRELQKNEQGTAVYGFTK----FSDMTTMEFKKIML 236 Query: 94 GYRHQKH----KKGRLFQEPLMLQ---IPKTVDWREKGCVTPVKNQGQCGSCWAFSASGC 146 Y+ ++ ++ + + + +P++ DWREKG VT VKNQG CGSCWAFS +G Sbjct: 237 PYQWEQPVYPMEQANFEKHDVTINEEDLPESFDWREKGAVTQVKNQGNCGSCWAFSTTGN 296 Query: 147 LEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQ----YIKEN--------- 193 +EG F+ KL+SLSEQ LVDC D +QGCNGGL A++ + +N Sbjct: 297 VEGAWFIAKNKLVSLSEQELVDC--DSMDQGCNGGLPSNAYKIGKFVVSDNYCFLVFYHK 354 Query: 194 --------GGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVDIPQQEKALMKAVATVGPI 245 GGL+ E++YPY+ + +C + G V++P E + K + T GPI Sbjct: 355 TTKEIIRMGGLEPEDAYPYDGRGETCHLVRKDIAVYINGSVELPHDEVEMQKWLVTKGPI 414 Query: 246 SVAMDASHPSLQFYSSGIY--YEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWG 303 S+ ++A+ +LQFY G+ ++ C L+HGVL+VGYG +G + YW+VKNSWG Sbjct: 415 SIGLNAN--TLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDG----RKPYWIVKNSWG 468 Query: 304 KEWGMDGYIKIAKDRNNHCGLATAASYPIVN 334 WG GY K+ + + N CG+ A+ +VN Sbjct: 469 PNWGEAGYFKLYRGK-NVCGVQEMATSALVN 498 >R09F10.1 CE28755 peptidase (ST.LOUIS) TR:Q23030 protein_id:AAC69091.2 Length = 383 Score = 192 bits (488), Expect = 2e-49 Identities = 116/310 (37%), Positives = 176/310 (56%), Gaps = 29/310 (9%) Query: 37 RRLYGTNEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYR 96 R+ E E+R ++ +N+ I+ E N G +++N F D T+EE +++V + Sbjct: 91 RKYTSVEEFEYRYQIFLRNV--IEFEAEEERN--LGLDLDVNEFTDWTDEELQKMVQENK 146 Query: 97 HQKHKKGRLFQEPLMLQI----PKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMF 152 + K+ E L+ P ++DWRE+G +TP+KNQGQCGSCWAF+ +E Q Sbjct: 147 YTKYDFDTPKFEGSYLETGVIRPASIDWREQGKLTPIKNQGQCGSCWAFATVASVEAQNA 206 Query: 153 LKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCK 212 +K GKL+SLSEQ +VDC D N GC+GG +A +++KEN GL+SE+ YPY A K Sbjct: 207 IKKGKLVSLSEQEMVDC--DGRNNGCSGGYRPYAMKFVKEN-GLESEKEYPYSA----LK 259 Query: 213 YRAEYAVANDTG-FVD----IPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYE- 266 + + NDT F+D + E+ + V T GP++ M+ ++ Y SGI+ Sbjct: 260 HDQCFLKENDTRVFIDDFRMLSNNEEDIANWVGTKGPVTFGMNVV-KAMYSYRSGIFNPS 318 Query: 267 -PNCSSKDLD-HGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGL 324 +C+ K + H + ++GYG EG + YW+VKNSWG WG GY ++A+ N+ CGL Sbjct: 319 VEDCTEKSMGAHALTIIGYGGEG----ESAYWIVKNSWGTSWGASGYFRLARGVNS-CGL 373 Query: 325 ATAASYPIVN 334 A PI+N Sbjct: 374 ANTVVAPIIN 383 >R07E3.1 CE02295 cysteine proteinase (HINXTON) TR:Q21810 protein_id:CAA89070.1 Length = 402 Score = 139 bits (351), Expect = 2e-33 Identities = 96/307 (31%), Positives = 154/307 (49%), Gaps = 36/307 (11%) Query: 40 YGTNEEEWRRAV----WEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIV--N 93 Y T++E +R ++N+ + N E+ + ++G N D T+EEF + + Sbjct: 101 YATSQESLKRLNAYYNTDENIANWNIQN-EHGSAEYGH----NDMSDWTDEEFEKTLLPK 155 Query: 94 GYRHQKHKKGRLFQEPLMLQI-----------PKTVDWREKGCVTPVKNQGQCGSCWAFS 142 + + HK+ F EP+ + P DWR+K +TPVK QGQCGSCWAF+ Sbjct: 156 SFYKRLHKEAE-FIEPIPESLTAKKGESSSPFPDFFDWRDKNVITPVKAQGQCGSCWAFA 214 Query: 143 ASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESY 202 ++ +E + G+ +LSEQ L+DC D + C+GG D AF+YI N GL + Sbjct: 215 STATVEAAWAIAHGEKRNLSEQTLLDC--DLVDNACDGGDEDKAFRYIHRN-GLANAVDL 271 Query: 203 PYEA-KDGSCKYRAEYAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSS 261 PY A + C + + E +++ + GP+++ M P ++ Y Sbjct: 272 PYVAHRQNGCAVNDHWNTTRIKAAYFLHHDEDSIINWLVNFGPVNIGMAVIQP-MRAYKG 330 Query: 262 GIY--YEPNCSSKDLD-HGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMD-GYIKIAKD 317 G++ E C ++ + H +L+ GY GT +KYW+VKNSWG WG++ GYI A+ Sbjct: 331 GVFTPSEYACKNEVIGLHALLITGY---GTSKTGEKYWIVKNSWGNTWGVEHGYIYFARG 387 Query: 318 RNNHCGL 324 N CG+ Sbjct: 388 -INACGI 393 >Y40H7A.10 CE21821 Cysteine protease (HINXTON) TR:Q9XWA4 protein_id:CAA22062.1 Length = 343 Score = 131 bits (330), Expect = 5e-31 Identities = 88/284 (30%), Positives = 152/284 (52%), Gaps = 24/284 (8%) Query: 48 RRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQ 107 R ++ +N+ +++ +N E + GK T E+N F D+T EE+++ + + H + L Sbjct: 71 RFTIFSRNLDLVERYNKEDA-GK--VTYELNDFSDLTEEEWKKYLMTPKPD-HSEKSLKP 126 Query: 108 EPLM--LQIPKTVDWRE---KGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLS 162 + L+ +P +VDWR VT +K QG CGSCWAF+ + +E + + G L SLS Sbjct: 127 KTLIDKKNLPNSVDWRNVNGTNHVTGIKYQGPCGSCWAFATAAAIESAVSISGGGLQSLS 186 Query: 163 EQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVAND 222 Q L+DC+ + C GG A +Y + + G+ + +YPY C+ VA Sbjct: 187 SQQLLDCT--VVSDKCGGGEPVEALKYAQSH-GITTAHNYPYYFWTTKCRETVP-TVARI 242 Query: 223 TGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVG 282 + ++ + E + + VA GP+ V + + +FY SGI +P+C ++ H ++V+G Sbjct: 243 SSWMK-AESEDEMAQIVALNGPMIVCANFATNKNRFYHSGIAEDPDCGTEP-THALIVIG 300 Query: 283 YGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLAT 326 YG + YW++KN++ K WG GY+++ +D N CG+ T Sbjct: 301 YGPD--------YWILKNTYSKVWGEKGYMRVKRD-VNWCGINT 335 >K02E7.10 CE11640 protease (ST.LOUIS) TR:O17255 protein_id:AAB71030.1 Length = 299 Score = 128 bits (321), Expect = 6e-30 Identities = 81/222 (36%), Positives = 125/222 (55%), Gaps = 18/222 (8%) Query: 118 VDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLK--TGKLISLSEQNLVDCSHDQGN 175 +DWREKG V PVK+QG+C + +AF+A +E M+ K GKL+S SEQ ++DC++ Sbjct: 84 LDWREKGIVGPVKDQGKCNASYAFAAIAAIE-SMYAKANNGKLLSFSEQQIIDCAN--FT 140 Query: 176 QGCNGGLMD-FAFQYIKENGGLDSEESYPYEAKD--GSCKYRAEYAVANDTGFVDIPQQE 232 C L + + +++KEN G+ +E YPY K+ G C+Y + T ++D+ E Sbjct: 141 NPCQENLENVLSNRFLKEN-GVGTEADYPYVGKENVGKCEYDSSKMKLRPT-YIDVYPNE 198 Query: 233 KALMKAVATVGPISVAMDASHPSLQFYSSGIY--YEPNCSSKDLDHGVLVVGYGYEGTDS 290 + + T G M S PS Y +GIY + C + + + +VGYG +G Sbjct: 199 EWARAHITTFGTGYFRM-RSPPSFFHYKTGIYNPTKEECGNANEARSLAIVGYGKDGA-- 255 Query: 291 NKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLATAASYPI 332 +KYW+VK S+G WG GY+K+A++ N CG+A + S PI Sbjct: 256 --EKYWIVKGSFGTSWGEHGYMKLARN-VNACGMAESISIPI 294 >Y71H2AR.2 CE22930 (ST.LOUIS) protein_id:AAK29985.1 Length = 345 Score = 120 bits (301), Expect = 1e-27 Identities = 81/214 (37%), Positives = 114/214 (52%), Gaps = 14/214 (6%) Query: 118 VDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLK--TGKLISLSEQNLVDCSHDQGN 175 +DWREKG V PVK+QG+C + AF+ + +E M+ K G L+S SEQ L+DC +DQG Sbjct: 86 LDWREKGIVGPVKDQGKCNASHAFAITSSIE-SMYAKATNGTLLSFSEQQLIDC-NDQGY 143 Query: 176 QGCNGGLMDFAFQYIKENGGLDSEESYPYEAK-DGSCKYRAEYAVANDTGFVDIPQQEKA 234 +GC A Y+ + G+++E YPY K + C + + + + V E Sbjct: 144 KGCEEQFAMNAIGYLATH-GIETEADYPYVDKTNEKCTFDSTKSKIHLKKGVVAEGNEVL 202 Query: 235 LMKAVATVGPISVAMDASHPSLQFYSSGIYYE--PNCSSKDLDHGVLVVGYGYEGTDSNK 292 V GP M A PSL Y GIY C+S +++VGYG EG + Sbjct: 203 GKVYVTNYGPAFFTMRAP-PSLYDYKIGIYNPSIEECTSTHEIRSMVIVGYGIEG----E 257 Query: 293 DKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLAT 326 KYW+VK S+G WG GY+K+A+D N C +AT Sbjct: 258 QKYWIVKGSFGTSWGEQGYMKLARD-VNACAMAT 290 >Y51A2D.8 CE19204 Cysteine proteases (2 domains) (HINXTON) TR:Q9XXQ7 protein_id:CAA16407.1 Length = 386 Score = 108 bits (271), Expect = 4e-24 Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 11/203 (5%) Query: 126 VTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDF 185 V P+K+QGQC CW F+ + +E +GK SLS+Q + DC +G GC GG + Sbjct: 164 VGPIKDQGQCACCWGFAVTALVETVYAAHSGKFKSLSDQEVCDCG-TEGTPGCKGGSLTL 222 Query: 186 AFQYIKENGGLDSEESYPYE---AKDG-SCKYRAEYAVANDTGF---VDIPQQEKALMKA 238 QY+K+ GL +E YPY+ A G C+ R + F V P++ + + Sbjct: 223 GVQYVKKY-GLSGDEDYPYDQNRANQGRRCRLRETDRIVPARAFNFAVINPRRAEEQIIQ 281 Query: 239 VATVGPISVAMDAS-HPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYG-YEGTDSNKDKYW 296 V T + VA+ + Y G+ E +C H +VGY E + YW Sbjct: 282 VLTEWKVPVAVYFKVGDQFKEYKEGVIIEDDCRRATQWHAGAIVGYDTVEDSRGRSHDYW 341 Query: 297 LVKNSWGKEWGMDGYIKIAKDRN 319 ++KNSWG +W GY+++ + R+ Sbjct: 342 IIKNSWGGDWAESGYVRVVRGRD 364 >Y113G7B.15 CE23295 (HINXTON) TR:Q9U2X1 protein_id:CAB54334.1 Length = 328 Score = 99.4 bits (246), Expect = 3e-21 Identities = 87/321 (27%), Positives = 127/321 (39%), Gaps = 47/321 (14%) Query: 36 HRRLYGTNEEEWRR-AVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNG 94 H++ Y T E+ RR A + KN + IQ N + T N F D +E N Sbjct: 3 HKKHYRTPAEKDRRLAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNRQEL-SARNS 61 Query: 95 YRHQKHKKGRLFQEPLMLQ----------------IPKTVDWRE-----KGCVTPVKNQG 133 H K+ +P + IP D R+ V PVK+Q Sbjct: 62 KIHPKNHTDLPIYKPRHPRGSRNHHNKRSKRQSGDIPDYFDLRDIYVDGSPVVGPVKDQE 121 Query: 134 QCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKEN 193 QCG CWAF+ + E L + SLS+Q + DC+ GC GG + + Sbjct: 122 QCGCCWAFATTAITEAANTLYSKSFTSLSDQEICDCADSGDTPGCVGGDPRNGLKMVHLR 181 Query: 194 GGLDSEESYPYEA----KDGSCKYRAEYAVAN---------DTGFVDIPQQEKALMKAVA 240 G S+ YPYE G+C + V D + + E + + Sbjct: 182 -GQSSDGDYPYEEYRANTTGNCVGDEKSTVIQPETLNVYRFDQDYAEEDIMENLYLNHIP 240 Query: 241 TVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLD--HGVLVVGYGYEGTDSNKDKYWLV 298 T V + ++Y+SG+ +C H V +VGY GT + YWLV Sbjct: 241 TAVYFRVG-----ENFEWYTSGVLQSEDCYQMTPAEWHSVAIVGY---GTSDDGVPYWLV 292 Query: 299 KNSWGKEWGMDGYIKIAKDRN 319 +NSW +WG+ GY+KI + N Sbjct: 293 RNSWNSDWGLHGYVKIRRGVN 313 >C50F4.3 CE05468 thiol protease (HINXTON) TR:Q18740 protein_id:CAA94738.1 Length = 374 Score = 98.2 bits (243), Expect = 6e-21 Identities = 80/270 (29%), Positives = 119/270 (43%), Gaps = 27/270 (10%) Query: 71 HGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKG-------RLFQEPLMLQIPKTVDWREK 123 H +N F D++ +E + + + K+ L + M +PKT D R K Sbjct: 90 HDTKYGINKFSDLSKKEIHGMYSKFGPPKNNTNVPKFNLKNLRVKRQMEGLPKTFDLRNK 149 Query: 124 GC-----VTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGC 178 + P+K Q C CW F+A+ E + + K ++LSEQ + DC+ G GC Sbjct: 150 KVGGHYIIGPIKTQDSCACCWGFAATAVAEAALTVHLKKAMNLSEQEVCDCAPKHG-PGC 208 Query: 179 NGGLMDFAFQYIKENGGLDSEESYPYEAKD----GSC---KYRAEY-AVANDTGFVDIPQ 230 NGG +YIKE GL + YP+ G C KY E + D +D Sbjct: 209 NGGDPVDGLEYIKEM-GLTGGKEYPFNVNRSTQLGRCESEKYDRELNPLELDYYAIDPFN 267 Query: 231 QEKALMKAVATVG-PISVAMDASHPSLQFYSSGIYYEPNCSSKDLD--HGVLVVGYGYEG 287 E + + + PISVA + SL Y SGI +C + H +VGYG Sbjct: 268 AEYQMTHHLYLLNLPISVAF-RTGASLSSYLSGILELADCDDEKGGHWHSGAIVGYGTTK 326 Query: 288 TDSNKD-KYWLVKNSWGKEWGMDGYIKIAK 316 + + YW+ +NSW +WG DGY +I + Sbjct: 327 NSAGRTVDYWIFRNSWWTDWGDDGYARIVR 356 >F26E4.3 CE17714 cysteine protease (HINXTON) TR:P90850 protein_id:CAB03007.1 Length = 491 Score = 97.8 bits (242), Expect = 8e-21 Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 35/241 (14%) Query: 113 QIPKTVDWREKG--CVTPVKNQGQCGSCWAFSASGCLEGQM-FLKTGKLIS-LSEQNLVD 168 ++P+ D R+K + PV +QG CGS W+ S + ++ + G++ S LS Q L+ Sbjct: 222 ELPEHFDARDKWGPLIHPVADQGDCGSSWSVSTTAISSDRLAIISEGRINSTLSSQQLLS 281 Query: 169 CSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEA----KDGSCKY----------- 213 C+ + +GC GG +D A+ YI++ G + + YPY + + G C Sbjct: 282 CNQHR-QKGCEGGYLDRAWWYIRKLGVV-GDHCYPYVSGQSREPGHCLIPKRDYTNRQGL 339 Query: 214 RAEYAVANDTGFVDIP-----QQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPN 268 R + T F P +E+ + + T GP+ H Y+ G+Y + Sbjct: 340 RCPSGSQDSTAFKMTPPYKVSSREEDIQTELMTNGPVQATF-VVHEDFFMYAGGVYQHSD 398 Query: 269 CSSK-------DLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNH 321 +++ + H V V+G+G + + KYWL NSWG +WG DGY K+ + NH Sbjct: 399 LAAQKGASSVAEGYHSVRVLGWGVDHSTGKPIKYWLCANSWGTQWGEDGYFKVLRG-ENH 457 Query: 322 C 322 C Sbjct: 458 C 458 >F15D4.4 CE28917 cysteine protease (HINXTON) TR:Q93512 protein_id:CAB02487.1 Length = 622 Score = 96.7 bits (239), Expect = 2e-20 Identities = 65/219 (29%), Positives = 102/219 (45%), Gaps = 35/219 (15%) Query: 117 TVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDC------S 170 TVDWR + P+ +Q CG CWAFS +E ++ SLS Q L+ C + Sbjct: 226 TVDWRP--FLKPILDQSTCGGCWAFSMISMIESFFAIQGYNTSSLSVQQLLTCDTKVDST 283 Query: 171 HDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCK-------------YRAEY 217 + N GC GG A Y++ + D+ P++ +D SC + Y Sbjct: 284 YGLANVGCKGGYFQIAGSYLEVSAARDAS-LIPFDLEDTSCDSSFFPPVVPTILLFDDGY 342 Query: 218 AVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHG 277 N T I ++ K GPI+V M A+ P + YS G+Y + +C + ++H Sbjct: 343 ISGNFTAAQLITMEQNIEDKV--RKGPIAVGM-AAGPDIYKYSEGVY-DGDCGTI-INHA 397 Query: 278 VLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAK 316 V++VG+ D YW+++NSWG WG GY ++ + Sbjct: 398 VVIVGF--------TDDYWIIRNSWGASWGEAGYFRVKR 428 >C32B5.7 CE08515 cathepsin-like peptidase (ST.LOUIS) TR:P91111 protein_id:AAB37963.1 Length = 250 Score = 90.1 bits (222), Expect = 2e-18 Identities = 63/191 (32%), Positives = 98/191 (50%), Gaps = 18/191 (9%) Query: 118 VDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQG 177 +DWR++G V PVK+QG C + +AF+A +E + G+L+S SEQ ++DC G Sbjct: 72 LDWRDEGVVGPVKDQGNCNASYAFAAISAIESMYAIANGQLLSFSEQQIIDC---LGGCA 128 Query: 178 CNGGLMDFAFQYIKENGGLDSEESYPYEA-KDGSCKY--RAEYAVANDTGFVDIPQQEKA 234 M A Y+ E G+++ YP+ K+ C+Y + Y + +DT D+ + A Sbjct: 129 IESDPM-MAMTYL-ERKGIETYTDYPFVGKKNEKCEYDSKKAYLILDDT--YDMSDESLA 184 Query: 235 LMKAVATVGPISVAMDASHPSLQFYSSGIY--YEPNCSSKDLDHGVLVVGYGYEGTDSNK 292 L+ + GP M+ + PS Y SGIY E C S + + +VGYG + Sbjct: 185 LV-FIDERGPGLFTMN-TPPSFFNYKSGIYNPTEEECKSTNEKRALTIVGYG----NDKG 238 Query: 293 DKYWLVKNSWG 303 YW+VK S+G Sbjct: 239 QNYWIVKGSFG 249 >Y51A2D.1 CE18411 Cysteine proteases (2 domains) (HINXTON) TR:O62484 protein_id:CAA16404.1 Length = 382 Score = 87.8 bits (216), Expect = 8e-18 Identities = 87/350 (24%), Positives = 139/350 (38%), Gaps = 76/350 (21%) Query: 31 QWKSTHRRLYGTNEEEWRRA---VWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEE 87 ++K R Y + E R V +N +++L+ G++ +N F D+T E Sbjct: 46 EFKKKFSRTYKSEAENQLRLQNFVKSRN-NVVRLNKNAQKAGRNS-NFAVNQFSDLTTSE 103 Query: 88 FRQIV---------NGYRHQKHKK--GRLFQEPLMLQIPKTVDWREKGC-----VTPVKN 131 Q + N H+ KK G+ + + + D R + V P+KN Sbjct: 104 LHQRLSRFPPNLTENSVFHKNFKKLLGKTRTKRQNSEFARNFDLRSQKVNGRYIVGPIKN 163 Query: 132 QGQCGSCWAFSASGCLEG------------------------------QMFLKTGKLISL 161 QGQC CW F+ + LE + K +S Sbjct: 164 QGQCACCWGFAVTAMLETIYAVNVGRFKLMSHIPALAPNFSDFDFFFFEFLAKLNMFLSF 223 Query: 162 SEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVAN 221 S+Q + DC+ D GC GG + + +Y N GL SE YP ++ + + A+ + Sbjct: 224 SDQEMCDCATDGTKAGCAGGGLMWGVEY-AINNGLASEFDYPEFDQNRATRPGTCEAMDD 282 Query: 222 DTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS-SKDLDHGVLV 280 D T P++ A A LQ Y SG+ +C + + H + Sbjct: 283 D-----------------KTFPPVNFA--AGTAFLQ-YKSGVLVTEDCDLAGTVWHAGAI 322 Query: 281 VGYGYEG-TDSNKDKYWLVKNSWG-KEWGMDGYIKIAKDRNNHCGLATAA 328 VGYG E ++W++KNSWG WG GY+K+ + + N CG+ A Sbjct: 323 VGYGEENDLRGRSQRFWIMKNSWGVSGWGTGGYVKLIRGK-NWCGIERGA 371 >C52E4.1 CE08943 locus:cpr-1 cathepsin-like cysteine protease (HINXTON) TR:Q18783 protein_id:CAB01410.1 Length = 340 Score = 87.4 bits (215), Expect = 1e-17 Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 39/252 (15%) Query: 107 QEPLMLQIPKTVD----WREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKT--GKLIS 160 QE ++ +P T D W E + +++Q CGSCWAF A+ + + ++T + Sbjct: 89 QEVVLASVPATFDSRTQWSECKSIKLIRDQATCGSCWAFGAAEMISDRTCIETKGAQQPI 148 Query: 161 LSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESY-----PY----------- 204 +S +L+ C GC GG A ++ G + + + PY Sbjct: 149 ISPDDLLSCCGSSCGNGCEGGYPIQALRWWDSKGVVTGGDYHGAGCKPYPIAPCTSGNCP 208 Query: 205 EAKDGSCKYRAEY----AVANDTGF----VDIPQQEKALMKAVATVGPISVAMDASHPSL 256 E+K SC + A A D F +P+ ++ + GP+ A + Sbjct: 209 ESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKNAASIQAEIYANGPVEAAFSV-YEDF 267 Query: 257 QFYSSGIYYEPNCSSKDLD-HGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIA 315 Y SG+Y + + K L H + ++G+G E + YWLV NSWG WG G+ KI Sbjct: 268 YKYKSGVY--KHTAGKYLGGHAIKIIGWGTE----SGSPYWLVANSWGVNWGESGFFKIY 321 Query: 316 KDRNNHCGLATA 327 + ++ CG+ +A Sbjct: 322 RG-DDQCGIESA 332 >F32B5.8 CE09855 cysteine proteinase (ST.LOUIS) TR:O01850 protein_id:AAB54210.1 Length = 427 Score = 85.9 bits (211), Expect = 3e-17 Identities = 73/261 (27%), Positives = 123/261 (46%), Gaps = 36/261 (13%) Query: 88 FRQIVNGYRHQKHKKGRLFQEPLMLQIPKTVDWREKGCVTPV---KNQG---QCGSCWAF 141 ++Q + H+++ + ++ +PKT DWR+ + +NQ CGSCWAF Sbjct: 160 YKQTGRVFEHKRYDRIYETEDFDSEDLPKTWDWRDANGINYASADRNQHIPQYCGSCWAF 219 Query: 142 SASGCLEGQMFLKTGKL---ISLSEQNLVDCSHDQGNQGC-NGGLMDFAFQYIKENGGLD 197 A+ L ++ +K LS Q ++DCS G C GG ++Y E+G + Sbjct: 220 GATSALADRINIKRKNAWPQAYLSVQEVIDCS---GAGTCVMGGEPGGVYKYAHEHG-IP 275 Query: 198 SEESYPYEAKDGSCK-YRA-------------EYAVANDTGFVDIPQQEKALMKA-VATV 242 E Y+A+DG C Y Y + + + + EK MKA + Sbjct: 276 HETCNNYQARDGKCDPYNRCGSCWPGECFSIKNYTLYKVSEYGTVHGYEK--MKAEIYHK 333 Query: 243 GPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSW 302 GPI+ + A+ + + Y+ GIY E + +D+DH + V G+G + + +YW+ +NSW Sbjct: 334 GPIACGIAATK-AFETYAGGIYKE--VTDEDIDHIISVHGWGVD--HESGVEYWIGRNSW 388 Query: 303 GKEWGMDGYIKIAKDRNNHCG 323 G+ WG G+ KI + + G Sbjct: 389 GEPWGEHGWFKIVTSQYKNAG 409 >M04G12.2 CE12424 cysteine protease (HINXTON) TR:P92005 protein_id:CAB03209.1 Length = 467 Score = 83.2 bits (204), Expect = 2e-16 Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 33/228 (14%) Query: 114 IPKTVDWREKGCV---TPVKNQG---QCGSCWAFSASGCLEGQMFL-KTGK--LISLSEQ 164 +P DWR V +P +NQ CGSCW F +G L + + + G+ + LS Q Sbjct: 221 LPTGWDWRNVSGVNYCSPTRNQHIPVYCGSCWVFGTTGALNDRFNVARKGRWPMTQLSPQ 280 Query: 165 NLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLD---------SEESYPYEAKDGSCKYRA 215 ++DC+ G C GG + ++ K G ++ + E PY + GSC Sbjct: 281 EIIDCN---GKGNCQGGEIGNVLEHAKIQGLVEEGCNVYRATNGECNPYH-RCGSCWPNE 336 Query: 216 EYAVANDTGFV-----DIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS 270 +++ N T + + ++K +M + GPI+ A+ A+ Y G+Y E S Sbjct: 337 CFSLTNYTRYYVKDYGQVQGRDK-IMSEIKKGGPIACAIGATKKFEYEYVKGVYSEK--S 393 Query: 271 SKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDR 318 + +H + + G+G D N +YW+ +NSWG+ WG G+ ++ + Sbjct: 394 DLESNHIISLTGWG---VDENGVEYWIARNSWGEAWGELGWFRVVTSK 438 >Y71H2AM.3 CE26272 (ST.LOUIS) protein_id:AAK29976.1 Length = 716 Score = 75.5 bits (184), Expect = 4e-14 Identities = 60/169 (35%), Positives = 83/169 (48%), Gaps = 25/169 (14%) Query: 118 VDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLK--TGKLISLSEQNLVDCSHDQGN 175 +DWR+KG V PVK+QG+C + AF+ S +E M+ K G L+S SEQ L+DC D G Sbjct: 86 LDWRDKGIVGPVKDQGKCNASHAFAISSSIE-SMYAKATNGSLLSFSEQQLIDCD-DHGF 143 Query: 176 QGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVDIPQQEKAL 235 +GC A Y + G+++E YPY K+ ++N+T Q K L Sbjct: 144 KGCEEQPAINAVSYFIFH-GIETEADYPYAGKENG-------KLSNET-------QGKEL 188 Query: 236 MKAVATVGPISVAMDASHPSLQFYSSGIYYE--PNCSSKDLDHGVLVVG 282 V GP M A PSL Y GIY C+S +++VG Sbjct: 189 ---VTNYGPAFFTMRAP-PSLYDYKIGIYNPSIEECTSTHEIRSMVIVG 233 >T10H4.12 CE27590 locus:cpr-3 protease (HINXTON) TR:Q9TW93 protein_id:CAB61024.2 Length = 370 Score = 74.7 bits (182), Expect = 7e-14 Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 42/250 (16%) Query: 102 KGRLFQEPLMLQIPKTVDWREK----GCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTG- 156 +G + EPL P T D REK + ++NQ CGSCWAF A+ + ++ +++ Sbjct: 84 RGEIVPEPL----PDTFDAREKWPDCNTIKLIRNQATCGSCWAFGAAEVISDRVCIQSNG 139 Query: 157 -KLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEE-----SYPY------ 204 + +S ++++ C GC GG A ++ +G + + PY Sbjct: 140 TQQPVISVEDILSCCGTTCGYGCKGGYSIEALRFWASSGAVTGGDYGGHGCMPYSFAPCT 199 Query: 205 ----EAKDGSCK-----------YRAEYAVANDTGFVDIPQQEKALMKAVATVGPISVAM 249 E+ SCK Y+ + V + + + GP+ + Sbjct: 200 KNCPESTTPSCKTTCQSSYKTEEYKKDKHYGASAYKVTTTKSVTEIQTEIYHYGPVEASY 259 Query: 250 DASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMD 309 + Y SG+Y+ + H V ++G+G E N YWL+ NSWG +G Sbjct: 260 KV-YEDFYHYKSGVYHYTSGKLVG-GHAVKIIGWGVE----NGVDYWLIANSWGTSFGEK 313 Query: 310 GYIKIAKDRN 319 G+ KI + N Sbjct: 314 GFFKIRRGTN 323 >F36D3.9 CE15973 cysteine protease (HINXTON) TR:O45466 protein_id:CAB04322.1 Length = 345 Score = 71.6 bits (174), Expect = 6e-13 Identities = 63/235 (26%), Positives = 98/235 (40%), Gaps = 40/235 (17%) Query: 120 WREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLIS--LSEQNLVDCSHDQGNQG 177 W + + ++ Q CGSCWAFS + + + + + +S +L+ C +G Sbjct: 111 WPQCKSMKLIREQSNCGSCWAFSTAEVISDRTCIASNGTQQPIISPTDLLTCCGMSCGEG 170 Query: 178 CNGGLMDFAFQYIKENGGLDSEE-------SYPYEAKDG-------------SCK--YRA 215 C+GG AFQ+ G + + YP + SC+ YR Sbjct: 171 CDGGFPYRAFQWWARRGVVTGGDYLGTGCKPYPIRPCNSDNCVNLQTPPCRLSCQPGYRT 230 Query: 216 EYAVANDTGF-----VDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS 270 Y ND + +P+ A+ + GP+ VA + + Y SGIY Sbjct: 231 TYT--NDKNYGSNSAYPVPRTVAAIQADIYYNGPV-VAAFIVYEDFEKYKSGIYRHIAGR 287 Query: 271 SKDLDHGVLVVGYGYE-GTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGL 324 SK H V ++G+G E GT YWL NSWG +WG G +I + + CG+ Sbjct: 288 SKG-GHAVKLIGWGTERGTP-----YWLAVNSWGSQWGESGTFRILRG-VDECGI 335 Database: /data_2/jason/blastdb/wormpep62 Posted date: Sep 3, 2001 2:17 PM Number of letters in database: 8,813,425 Number of sequences in database: 20,085 Lambda K H 0.317 0.134 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6241552 Number of Sequences: 20085 Number of extensions: 276768 Number of successful extensions: 629 Number of sequences better than 1.0e-10: 20 Number of HSP's better than 0.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 578 Number of HSP's gapped (non-prelim): 20 length of query: 334 length of database: 8,813,425 effective HSP length: 44 effective length of query: 290 effective length of database: 7,929,685 effective search space: 2299608650 effective search space used: 2299608650 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 156 (64.7 bits) BLASTP 2.1.3 [Apr-11-2001] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= PAPA_CARPA (345 letters) Database: /data_2/jason/blastdb/wormpep62 20,085 sequences; 8,813,425 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value R09F10.1 CE28755 peptidase (ST.LOUIS) TR:Q23030 protein_id... 174 7e-44 T03E6.7 CE16333 cathepsin-like protease (HINXTON) TR:O4573... 171 5e-43 Y40H7A.10 CE21821 Cysteine protease (HINXTON) TR:Q9XWA4 pr... 160 8e-40 F41E6.6 CE10254 cysteine protease and a protease inhibitor... 156 2e-38 Y51A2D.8 CE19204 Cysteine proteases (2 domains) (HINXTON) ... 127 1e-29 >R09F10.1 CE28755 peptidase (ST.LOUIS) TR:Q23030 protein_id:AAC69091.2 Length = 383 Score = 174 bits (441), Expect = 7e-44 Identities = 107/348 (30%), Positives = 173/348 (48%), Gaps = 18/348 (5%) Query: 7 ISKLLFVAICLFVYMGLSFGDFSIVGYSQNDLTSTERLIQLFESWMLKHNKIYKNIDEKI 66 +++L + L + + LSF F + + +L Q+F ++LK ++ Y +++E Sbjct: 45 LTQLFSGLVLLTMLILLSFFVFQRLNHKMENLKHE----QMFNDFILKFDRKYTSVEEFE 100 Query: 67 YRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSYEEV 126 YR++IF N+ + ++N L +N F D +++E ++ + Y +E Sbjct: 101 YRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEELQKMVQENKYTKYDFDTPKFEGS 160 Query: 127 LNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQEL 186 + V P +DWR++G +TP+KNQG CGSCWAF+ V ++E I+ G L SEQE+ Sbjct: 161 YLETGVIRPASIDWREQGKLTPIKNQGQCGSCWAFATVASVEAQNAIKKGKLVSLSEQEM 220 Query: 187 LDCDRRSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQV 246 +DCD R+ GC+GGY A++ V + G+ YPY ++ ++ D R + Sbjct: 221 VDCDGRNNGCSGGYRPYAMKFVKENGLESEKEYPYSALKHDQCFLKENDTRVFIDDFRML 280 Query: 247 QPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIF---VGPCGNKV--DHAVAAVGYGP 301 E + PV+ + K YR GIF V C K HA+ +GYG Sbjct: 281 SNNEEDIANWVGTKGPVTFGMNVV-KAMYSYRSGIFNPSVEDCTEKSMGAHALTIIGYGG 339 Query: 302 N----YILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVKN 345 Y ++KNSWGT WG +GY R+ RG + CGL + P+ N Sbjct: 340 EGESAYWIVKNSWGTSWGASGYFRLARGVNS----CGLANTVVAPIIN 383 >T03E6.7 CE16333 cathepsin-like protease (HINXTON) TR:O45734 protein_id:CAB07275.1 Length = 337 Score = 171 bits (434), Expect = 5e-43 Identities = 107/319 (33%), Positives = 163/319 (50%), Gaps = 25/319 (7%) Query: 42 ERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNN----SYWLGLNVFA 97 E I+ ++ + +K Y +E+ Y E F N+ +I+ N+ + ++ +GLN A Sbjct: 26 ESAIEKWDDYKEDFDKEYSESEEQTY-MEAFVKNMIHIENHNRDHRLGRKTFEMGLNHIA 84 Query: 98 DMSNDEFKEK--YTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSC 155 D+ ++++ Y + S+ N V +P+ VDWR VT VKNQG C Sbjct: 85 DLPFSQYRKLNGYRRLFGDSRIKNSSSFLAPFN---VQVPDEVDWRDTHLVTDVKNQGMC 141 Query: 156 GSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR--SYGCNGGYPWSALQLVA-QYG 212 GSCWAFSA +EG + G L SEQ L+DC + ++GCNGG A + + +G Sbjct: 142 GSCWAFSATGALEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRDNHG 201 Query: 213 IHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQ-PVSVVLEAAG 271 + +YPY+G C +K A G +E L ++A Q P+S+ ++A Sbjct: 202 VDTEESYPYKGRDMKCHFNKK-TVGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGH 260 Query: 272 KDFQLYRGGIFVGP--CGNKVDHAVAAVGYGP-----NYILIKNSWGTGWGENGYIRIKR 324 + FQLY+ G++ ++DH V VGYG +Y ++KNSWG GWGE GYIRI R Sbjct: 261 RSFQLYKKGVYYDEECSSEELDHGVLLVGYGTDPEHGDYWIVKNSWGAGWGEKGYIRIAR 320 Query: 325 GTGNSYGVCGLYTSSFYPV 343 N CG+ T + YP+ Sbjct: 321 NRNNH---CGVATKASYPL 336 >Y40H7A.10 CE21821 Cysteine protease (HINXTON) TR:Q9XWA4 protein_id:CAA22062.1 Length = 343 Score = 160 bits (406), Expect = 8e-40 Identities = 100/295 (33%), Positives = 153/295 (50%), Gaps = 15/295 (5%) Query: 48 FESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKN-NSYWLGLNVFADMSNDEFKE 106 F+++++K+ + Y N E + RF IF NL ++ NK++ LN F+D++ +E+K Sbjct: 51 FQNFLVKYLREYPNEYEIVKRFTIFSRNLDLVERYNKEDAGKVTYELNDFSDLTEEEWK- 109 Query: 107 KYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGA---VTPVKNQGSCGSCWAFSA 163 KY + +++ L + +++ N+P VDWR VT +K QG CGSCWAF+ Sbjct: 110 KYLMTPKPDHSEKSLKPKTLIDKK--NLPNSVDWRNVNGTNHVTGIKYQGPCGSCWAFAT 167 Query: 164 VVTIEGIIKIRTGNLNEYSEQELLDCDRRSYGCNGGYPWSALQLVAQYGIHYRNTYPYEG 223 IE + I G L S Q+LLDC S C GG P AL+ +GI + YPY Sbjct: 168 AAAIESAVSISGGGLQSLSSQQLLDCTVVSDKCGGGEPVEALKYAQSHGITTAHNYPYYF 227 Query: 224 VQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFV 283 C RE P A+ + + +E A + ++ N P+ V A + Y GI Sbjct: 228 WTTKC--RETVPTVARISSWMKAESEDEMAQIVAL-NGPMIVCANFATNKNRFYHSGIAE 284 Query: 284 GP-CGNKVDHAVAAVGYGPNYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYT 337 P CG + HA+ +GYGP+Y ++KN++ WGE GY+R+KR CG+ T Sbjct: 285 DPDCGTEPTHALIVIGYGPDYWILKNTYSKVWGEKGYMRVKR----DVNWCGINT 335 >F41E6.6 CE10254 cysteine protease and a protease inhibitor (ST.LOUIS) TR:O16454 protein_id:AAB65956.1 Length = 498 Score = 156 bits (395), Expect = 2e-38 Identities = 110/327 (33%), Positives = 156/327 (47%), Gaps = 51/327 (15%) Query: 48 FESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWL-GLNVFADMSNDEFKE 106 F ++ +H K Y N E + RF +FK N K I E K + G F+DM+ EFK+ Sbjct: 174 FLDFVDRHEKKYTNKREVLKRFRVFKKNAKVIRELQKNEQGTAVYGFTKFSDMTTMEFKK 233 Query: 107 -----KYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAF 161 ++ + ++ +N+ D +PE DWR+KGAVT VKNQG+CGSCWAF Sbjct: 234 IMLPYQWEQPVYPMEQANFEKHDVTINEED--LPESFDWREKGAVTQVKNQGNCGSCWAF 291 Query: 162 SAVVTIEGIIKIRTGNLNEYSEQELLDCDRRSYGCNGGYPWSAL---------------- 205 S +EG I L SEQEL+DCD GCNGG P +A Sbjct: 292 STTGNVEGAWFIAKNKLVSLSEQELVDCDSMDQGCNGGLPSNAYKIGKFVVSDNYCFLVF 351 Query: 206 ------QLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGAL-LYSI 258 +++ G+ + YPY+G C K A +G ++ P++E + + + Sbjct: 352 YHKTTKEIIRMGGLEPEDAYPYDGRGETCHLVRK-DIAVYINGSVEL-PHDEVEMQKWLV 409 Query: 259 ANQPVSVVLEAAGKDFQLYRGG------IFVGPCGNKVDHAVAAVGYGPN----YILIKN 308 P+S+ L A Q YR G IF P ++H V VGYG + Y ++KN Sbjct: 410 TKGPISIGLNA--NTLQFYRHGVVHPFKIFCEPF--MLNHGVLIVGYGKDGRKPYWIVKN 465 Query: 309 SWGTGWGENGYIRIKRGTGNSYGVCGL 335 SWG WGE GY ++ RG VCG+ Sbjct: 466 SWGPNWGEAGYFKLYRGK----NVCGV 488 >Y51A2D.8 CE19204 Cysteine proteases (2 domains) (HINXTON) TR:Q9XXQ7 protein_id:CAA16407.1 Length = 386 Score = 127 bits (318), Expect = 1e-29 Identities = 95/332 (28%), Positives = 148/332 (43%), Gaps = 44/332 (13%) Query: 37 DLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYW----LG 92 D E+L + FE + K+N+ YK+ E RF F + +D+ N K+ + G Sbjct: 32 DRDHPEKLYKAFEDFKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFG 91 Query: 93 LNVFADMSNDEFKEKYTGSIAGNYTTTE-LSYEEVLND---GDVN----------IPEYV 138 +N F+D+S EF + + + N T L++++ D D+N P+Y Sbjct: 92 INKFSDLSTAEFHGRLSNVVPSNNTGLPMLNFDKKKPDFRAADMNKTRHKRRSTRYPDYF 151 Query: 139 DWRQKGA-----VTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR- 192 D R + V P+K+QG C CW F+ +E + +G S+QE+ DC Sbjct: 152 DLRNEKINGRYIVGPIKDQGQCACCWGFAVTALVETVYAAHSGKFKSLSDQEVCDCGTEG 211 Query: 193 SYGCNGGYPWSALQLVAQYGIHYRNTYPYE----GVQRYCRSREKGPYA-AKTDGVRQVQ 247 + GC GG +Q V +YG+ YPY+ R CR RE A+ + Sbjct: 212 TPGCKGGSLTLGVQYVKKYGLSGDEDYPYDQNRANQGRRCRLRETDRIVPARAFNFAVIN 271 Query: 248 PYNEGALLYSIANQ---PVSVVLEAAGKDFQLYRGGIFV-GPCGNKVD-HAVAAVGY--- 299 P + + + PV+V + G F+ Y+ G+ + C HA A VGY Sbjct: 272 PRRAEEQIIQVLTEWKVPVAVYFK-VGDQFKEYKEGVIIEDDCRRATQWHAGAIVGYDTV 330 Query: 300 ------GPNYILIKNSWGTGWGENGYIRIKRG 325 +Y +IKNSWG W E+GY+R+ RG Sbjct: 331 EDSRGRSHDYWIIKNSWGGDWAESGYVRVVRG 362 >R07E3.1 CE02295 cysteine proteinase (HINXTON) TR:Q21810 protein_id:CAA89070.1 Length = 402 Score = 114 bits (286), Expect = 7e-26 Identities = 90/309 (29%), Positives = 139/309 (44%), Gaps = 41/309 (13%) Query: 54 KHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNN--SYWLGLNVFADMSNDEFKEKYTGS 111 K +K Y E + R + + + I N +N S G N +D +++EF++ Sbjct: 96 KFDKSYATSQESLKRLNAYYNTDENIANWNIQNEHGSAEYGHNDMSDWTDEEFEKTLLPK 155 Query: 112 IAGNYTTTELSYEEVL--------NDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSA 163 E + E + + P++ DWR K +TPVK QG CGSCWAF++ Sbjct: 156 SFYKRLHKEAEFIEPIPESLTAKKGESSSPFPDFFDWRDKNVITPVKAQGQCGSCWAFAS 215 Query: 164 VVTIEGIIKIRTGNLNEYSEQELLDCDRRSYGCNGGYPWSALQLVAQYGIHYRNTYPYEG 223 T+E I G SEQ LLDCD C+GG A + + + G+ PY Sbjct: 216 TATVEAAWAIAHGEKRNLSEQTLLDCDLVDNACDGGDEDKAFRYIHRNGLANAVDLPYVA 275 Query: 224 VQR--------YCRSREKGPYAAKTDGVRQVQPYNEGALLYSIAN-QPVSVVLEAAGKDF 274 ++ + +R K Y D E +++ + N PV++ + A + Sbjct: 276 HRQNGCAVNDHWNTTRIKAAYFLHHD---------EDSIINWLVNFGPVNIGM-AVIQPM 325 Query: 275 QLYRGGIFVG---PCGNKVD--HAVAAVGYGPN-----YILIKNSWGTGWG-ENGYIRIK 323 + Y+GG+F C N+V HA+ GYG + Y ++KNSWG WG E+GYI Sbjct: 326 RAYKGGVFTPSEYACKNEVIGLHALLITGYGTSKTGEKYWIVKNSWGNTWGVEHGYIYFA 385 Query: 324 RGTGNSYGV 332 RG N+ G+ Sbjct: 386 RGI-NACGI 393 >C50F4.3 CE05468 thiol protease (HINXTON) TR:Q18740 protein_id:CAA94738.1 Length = 374 Score = 114 bits (286), Expect = 7e-26 Identities = 97/357 (27%), Positives = 152/357 (42%), Gaps = 39/357 (10%) Query: 6 SISKLLFVAICLFVYMGLSFG-DFSIVGYSQN-DLTSTERLIQLFESWMLKHNKIYKNID 63 S+ L F+ I +F G +F + N D + E+L + FE +++K+ + YK+ Sbjct: 3 SLLALFFIQIFIFTVTSFDVGANFEDSFFEINIDRNNPEKLYKEFEDFIVKYKRNYKDEI 62 Query: 64 EKIYRFEIFKDNLKYIDETNKK----NNSYWLGLNVFADMSNDEFKEKYT--GSIAGNYT 117 EK +RF+ F + + NK + G+N F+D+S E Y+ G N Sbjct: 63 EKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSKKEIHGMYSKFGPPKNNTN 122 Query: 118 TTELSYEEVLNDGDVN-IPEYVDWRQKGA-----VTPVKNQGSCGSCWAFSAVVTIEGII 171 + + + + + +P+ D R K + P+K Q SC CW F+A E + Sbjct: 123 VPKFNLKNLRVKRQMEGLPKTFDLRNKKVGGHYIIGPIKTQDSCACCWGFAATAVAEAAL 182 Query: 172 KIRTGNLNEYSEQELLDC-DRRSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQR---- 226 + SEQE+ DC + GCNGG P L+ + + G+ YP+ V R Sbjct: 183 TVHLKKAMNLSEQEVCDCAPKHGPGCNGGDPVDGLEYIKEMGLTGGKEYPF-NVNRSTQL 241 Query: 227 -YCRS----REKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGI 281 C S RE P + + + N P+SV G Y GI Sbjct: 242 GRCESEKYDRELNPLELDYYAIDPFNAEYQMTHHLYLLNLPISVAFR-TGASLSSYLSGI 300 Query: 282 F-VGPCGNKVD---HAVAAVGYGP---------NYILIKNSWGTGWGENGYIRIKRG 325 + C ++ H+ A VGYG +Y + +NSW T WG++GY RI RG Sbjct: 301 LELADCDDEKGGHWHSGAIVGYGTTKNSAGRTVDYWIFRNSWWTDWGDDGYARIVRG 357 >F15D4.4 CE28917 cysteine protease (HINXTON) TR:Q93512 protein_id:CAB02487.1 Length = 622 Score = 110 bits (276), Expect = 1e-24 Identities = 84/290 (28%), Positives = 127/290 (42%), Gaps = 34/290 (11%) Query: 64 EKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIA------GNYT 117 E + RF ++ K +DE N Y LG++ + MS ++F G +A T Sbjct: 150 EGLKRFNVYSKVKKEVDE---HNIMYELGMSSYK-MSTNQFSVALDGEVAPLTLNLDALT 205 Query: 118 TTELSYEEVLNDGDVNIPE-YVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTG 176 T ++ E VDWR + P+ +Q +CG CWAFS + IE I+ Sbjct: 206 PTATVIPATISSRKKRDTEPTVDWRP--FLKPILDQSTCGGCWAFSMISMIESFFAIQGY 263 Query: 177 NLNEYSEQELLDCDRR--------SYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYC 228 N + S Q+LL CD + + GC GGY A + + P++ C Sbjct: 264 NTSSLSVQQLLTCDTKVDSTYGLANVGCKGGYFQIAGSYLEVSAARDASLIPFDLEDTSC 323 Query: 229 RSREKGP-----------YAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLY 277 S P Y + Q+ + + + P++V + AAG D Y Sbjct: 324 DSSFFPPVVPTILLFDDGYISGNFTAAQLITMEQN-IEDKVRKGPIAVGM-AAGPDIYKY 381 Query: 278 RGGIFVGPCGNKVDHAVAAVGYGPNYILIKNSWGTGWGENGYIRIKRGTG 327 G++ G CG ++HAV VG+ +Y +I+NSWG WGE GY R+KR G Sbjct: 382 SEGVYDGDCGTIINHAVVIVGFTDDYWIIRNSWGASWGEAGYFRVKRTPG 431 >Y113G7B.15 CE23295 (HINXTON) TR:Q9U2X1 protein_id:CAB54334.1 Length = 328 Score = 103 bits (256), Expect = 2e-22 Identities = 89/312 (28%), Positives = 132/312 (41%), Gaps = 40/312 (12%) Query: 53 LKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK----NNSYWLGLNVFADMSNDEFKEKY 108 + H K Y+ EK R F N + I E N K + G N FAD + E + Sbjct: 1 MHHKKHYRTPAEKDRRLAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNRQELSARN 60 Query: 109 TGSIAGNYTTTELSYEEVLNDGDVN------------IPEYVDWRQ-----KGAVTPVKN 151 + N+T + Y+ G N IP+Y D R V PVK+ Sbjct: 61 SKIHPKNHTDLPI-YKPRHPRGSRNHHNKRSKRQSGDIPDYFDLRDIYVDGSPVVGPVKD 119 Query: 152 QGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDC--DRRSYGCNGGYPWSALQLVA 209 Q CG CWAF+ E + + + S+QE+ DC + GC GG P + L++V Sbjct: 120 QEQCGCCWAFATTAITEAANTLYSKSFTSLSDQEICDCADSGDTPGCVGGDPRNGLKMVH 179 Query: 210 QYGIHYRNTYPYE----GVQRYCRSREKGP--YAAKTDGVRQVQPYNEGALLYSI-ANQP 262 G YPYE C EK + R Q Y E ++ ++ N Sbjct: 180 LRGQSSDGDYPYEEYRANTTGNCVGDEKSTVIQPETLNVYRFDQDYAEEDIMENLYLNHI 239 Query: 263 VSVVLEAAGKDFQLYRGGIFVGPCGNKVD----HAVAAVGYGPN-----YILIKNSWGTG 313 + V G++F+ Y G+ ++ H+VA VGYG + Y L++NSW + Sbjct: 240 PTAVYFRVGENFEWYTSGVLQSEDCYQMTPAEWHSVAIVGYGTSDDGVPYWLVRNSWNSD 299 Query: 314 WGENGYIRIKRG 325 WG +GY++I+RG Sbjct: 300 WGLHGYVKIRRG 311 >Y71H2AR.2 CE22930 (ST.LOUIS) protein_id:AAK29985.1 Length = 345 Score = 93.6 bits (231), Expect = 2e-19 Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 29/213 (13%) Query: 131 DVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGI-IKIRTGNLNEYSEQELLDC 189 D E++DWR+KG V PVK+QG C + AF+ +IE + K G L +SEQ+L+DC Sbjct: 79 DRTTEEFLDWREKGIVGPVKDQGKCNASHAFAITSSIESMYAKATNGTLLSFSEQQLIDC 138 Query: 190 DRRSY-GCNGGYPWSALQLVAQYGIHYRNTYPY-EGVQRYC-----RSR---EKGPYAAK 239 + + Y GC + +A+ +A +GI YPY + C +S+ +KG A Sbjct: 139 NDQGYKGCEEQFAMNAIGYLATHGIETEADYPYVDKTNEKCTFDSTKSKIHLKKGVVAEG 198 Query: 240 TDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIF---VGPCGNKVD-HAVA 295 + + +V N G +++ P Y+ GI+ + C + + ++ Sbjct: 199 NEVLGKVYVTNYGPAFFTMRAPP----------SLYDYKIGIYNPSIEECTSTHEIRSMV 248 Query: 296 AVGYG----PNYILIKNSWGTGWGENGYIRIKR 324 VGYG Y ++K S+GT WGE GY+++ R Sbjct: 249 IVGYGIEGEQKYWIVKGSFGTSWGEQGYMKLAR 281 >K02E7.10 CE11640 protease (ST.LOUIS) TR:O17255 protein_id:AAB71030.1 Length = 299 Score = 93.6 bits (231), Expect = 2e-19 Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 15/219 (6%) Query: 136 EYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGI-IKIRTGNLNEYSEQELLDCDRRSY 194 +++DWR+KG V PVK+QG C + +AF+A+ IE + K G L +SEQ+++DC + Sbjct: 82 DFLDWREKGIVGPVKDQGKCNASYAFAAIAAIESMYAKANNGKLLSFSEQQIIDCANFTN 141 Query: 195 GCNGGYP-WSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGA 253 C + + + + G+ YPY G + + V P E A Sbjct: 142 PCQENLENVLSNRFLKENGVGTEADYPYVGKENVGKCEYDSSKMKLRPTYIDVYPNEEWA 201 Query: 254 LLYSIANQPVSVVLEAAGKDFQLYRGGIF---VGPCGNKVD-HAVAAVGYGPN----YIL 305 + I + F Y+ GI+ CGN + ++A VGYG + Y + Sbjct: 202 RAH-ITTFGTGYFRMRSPPSFFHYKTGIYNPTKEECGNANEARSLAIVGYGKDGAEKYWI 260 Query: 306 IKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 344 +K S+GT WGE+GY+++ R + CG+ S P+K Sbjct: 261 VKGSFGTSWGEHGYMKLAR----NVNACGMAESISIPIK 295 >F57F5.1 CE05999 cysteine protease (HINXTON) TR:Q20950 protein_id:CAB00098.1 Length = 400 Score = 91.3 bits (225), Expect = 8e-19 Identities = 84/315 (26%), Positives = 127/315 (39%), Gaps = 72/315 (22%) Query: 79 IDETNKKNNSYWLGLNVFADMSNDEFKEKYTGS----IAGNYTTTELSYEEVLNDGDVNI 134 +D NK S+ L + D K++ G+ I Y E+++ EV D + Sbjct: 90 VDYVNKVQTSFKAELGSYFSSYPDTIKKQLMGAKMVEIPEEYRVFEMTHPEV---EDAAV 146 Query: 135 PEYVD----WRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTG--NLNEYSEQELLD 188 P+ D W +++ +++Q SCGSCWA SA TI I I + + S ++ Sbjct: 147 PDSFDSRTAWPNCPSISKIRDQSSCGSCWAVSAAETISDRICIASNAKTILSISADDINA 206 Query: 189 CDRR--SYGCNGGYPWSALQLVAQ---------------------------YGIHYR--- 216 C GCNGGYP A + + G HY+ Sbjct: 207 CCGMVCGNGCNGGYPIEAWRHYVKKGYVTGGSYQDKTGCKPYPYPPCEHHVNGTHYKPCP 266 Query: 217 -NTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLE------- 268 N YP + +R C++ Y Q + G Y+++ + + E Sbjct: 267 SNMYPTDKCERSCQAGYALTYQ---------QDLHFGQSAYAVSKKAAEIQKEIMTHGPV 317 Query: 269 ----AAGKDFQLYRGGIFVGPCGNKV-DHAVAAVGYGPN----YILIKNSWGTGWGENGY 319 +DF+ Y GG++V G + HAV +G+G + Y L NSW WGENGY Sbjct: 318 EVAFTVYEDFEHYSGGVYVHTAGASLGGHAVKMLGWGVDNGTPYWLCANSWNEDWGENGY 377 Query: 320 IRIKRGTGNSYGVCG 334 RI RG N G+ G Sbjct: 378 FRIIRGV-NECGIEG 391 >T10H4.12 CE27590 locus:cpr-3 protease (HINXTON) TR:Q9TW93 protein_id:CAB61024.2 Length = 370 Score = 85.9 bits (211), Expect = 3e-17 Identities = 67/233 (28%), Positives = 104/233 (43%), Gaps = 42/233 (18%) Query: 134 IPEYVDWRQK----GAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNE--YSEQELL 187 +P+ D R+K + ++NQ +CGSCWAF A I + I++ + S +++L Sbjct: 92 LPDTFDAREKWPDCNTIKLIRNQATCGSCWAFGAAEVISDRVCIQSNGTQQPVISVEDIL 151 Query: 188 DCDRRS--YGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRY----------------CR 229 C + YGC GGY AL+ A G Y G Y C+ Sbjct: 152 SCCGTTCGYGCKGGYSIEALRFWASSGAVTGGDYGGHGCMPYSFAPCTKNCPESTTPSCK 211 Query: 230 SREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVV--------LEAAGK---DFQLYR 278 + + Y KT+ ++ + Y A + + +EA+ K DF Y+ Sbjct: 212 TTCQSSY--KTEEYKKDKHYGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYK 269 Query: 279 GGIFVGPCGNKVD-HAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRGT 326 G++ G V HAV +G+G +Y LI NSWGT +GE G+ +I+RGT Sbjct: 270 SGVYHYTSGKLVGGHAVKIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGT 322 >C52E4.1 CE08943 locus:cpr-1 cathepsin-like cysteine protease (HINXTON) TR:Q18783 protein_id:CAB01410.1 Length = 340 Score = 85.5 bits (210), Expect = 4e-17 Identities = 73/252 (28%), Positives = 102/252 (39%), Gaps = 36/252 (14%) Query: 107 KYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVT 166 KY + + TE E VL W + ++ +++Q +CGSCWAF A Sbjct: 75 KYAAAHSDEIRATE--QEVVLASVPATFDSRTQWSECKSIKLIRDQATCGSCWAFGAAEM 132 Query: 167 IEGIIKIRTGNLNE--YSEQELLDCDRRSYG--CNGGYPWSALQLVAQYGIHYRNTYPYE 222 I I T + S +LL C S G C GGYP AL+ G+ Y Sbjct: 133 ISDRTCIETKGAQQPIISPDDLLSCCGSSCGNGCEGGYPIQALRWWDSKGVVTGGDYHGA 192 Query: 223 GVQRY---------------------CRSREKGPYAA-KTDGVRQVQ-PYNEGALLYSI- 258 G + Y C+S YA K GV P N ++ I Sbjct: 193 GCKPYPIAPCTSGNCPESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKNAASIQAEIY 252 Query: 259 ANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVD-HAVAAVGYGPN----YILIKNSWGTG 313 AN PV +DF Y+ G++ G + HA+ +G+G Y L+ NSWG Sbjct: 253 ANGPVEAAFSVY-EDFYKYKSGVYKHTAGKYLGGHAIKIIGWGTESGSPYWLVANSWGVN 311 Query: 314 WGENGYIRIKRG 325 WGE+G+ +I RG Sbjct: 312 WGESGFFKIYRG 323 >F26E4.3 CE17714 cysteine protease (HINXTON) TR:P90850 protein_id:CAB03007.1 Length = 491 Score = 80.5 bits (197), Expect = 1e-15 Identities = 66/233 (28%), Positives = 98/233 (41%), Gaps = 42/233 (18%) Query: 134 IPEYVDWRQKGA--VTPVKNQGSCGSCWAFSAV-VTIEGIIKIRTGNLNE-YSEQELLDC 189 +PE+ D R K + PV +QG CGS W+ S ++ + + I G +N S Q+LL C Sbjct: 223 LPEHFDARDKWGPLIHPVADQGDCGSSWSVSTTAISSDRLAIISEGRINSTLSSQQLLSC 282 Query: 190 DR-RSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRY-------------------CR 229 ++ R GC GGY A + + G+ + YPY Q C Sbjct: 283 NQHRQKGCEGGYLDRAWWYIRKLGVVGDHCYPYVSGQSREPGHCLIPKRDYTNRQGLRCP 342 Query: 230 SREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFV------ 283 S + A K +V E + N PV +DF +Y GG++ Sbjct: 343 SGSQDSTAFKMTPPYKVSSREEDIQTELMTNGPVQATF-VVHEDFFMYAGGVYQHSDLAA 401 Query: 284 ---GPCGNKVDHAVAAVGYGPN--------YILIKNSWGTGWGENGYIRIKRG 325 + H+V +G+G + Y L NSWGT WGE+GY ++ RG Sbjct: 402 QKGASSVAEGYHSVRVLGWGVDHSTGKPIKYWLCANSWGTQWGEDGYFKVLRG 454 >W07B8.4 CE14680 thiol protease (ST.LOUIS) TR:O16288 protein_id:AAB65345.1 Length = 335 Score = 78.2 bits (191), Expect = 7e-15 Identities = 71/260 (27%), Positives = 108/260 (41%), Gaps = 60/260 (23%) Query: 133 NIPEYVD----WRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRT-GNLNE-YSEQEL 186 +IP+ D W Q +V +++Q CGSCWA +A I I + G++N S +++ Sbjct: 72 SIPDSYDVRDHWPQCISVNNIRDQSHCGSCWAVAAAEAISDRTCIASNGDVNTLLSAEDI 131 Query: 187 LDCDRRSY----GCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDG 242 L C + GC GGYP A + + G+ ++ Q C+ P DG Sbjct: 132 LTCCTGKFNCGDGCEGGYPIQAWRYWVKNGLVTGGSFE---SQYGCKPYSIAPCGETIDG 188 Query: 243 VRQVQ-----------------------PYNE----GALLYSIANQPVSVVLEAAG---- 271 V + PY++ GA Y+I + E Sbjct: 189 VTWPECPMKISDTPKCEHHCTGNNSYPIPYDQDKHFGASAYAIGRSAKQIQTEILAHGPV 248 Query: 272 -------KDFQLYRGGIFVGPCGNKV-DHAVAAVGYGPN----YILIKNSWGTGWGENGY 319 +DF LY+ GI+ G ++ HAV +G+G + Y L NSW T WGE GY Sbjct: 249 EVGFIVYEDFYLYKTGIYTHVAGGELGGHAVKMLGWGVDNGTPYWLAANSWNTVWGEKGY 308 Query: 320 IRIKRGTGNSYGVCGLYTSS 339 RI RG CG+ +++ Sbjct: 309 FRILRGVDE----CGIESAA 324 >C32B5.7 CE08515 cathepsin-like peptidase (ST.LOUIS) TR:P91111 protein_id:AAB37963.1 Length = 250 Score = 73.9 bits (180), Expect = 1e-13 Identities = 57/189 (30%), Positives = 87/189 (45%), Gaps = 22/189 (11%) Query: 137 YVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRRSYGC 196 ++DWR +G V PVK+QG+C + +AF+A+ IE + I G L +SEQ+++DC GC Sbjct: 71 FLDWRDEGVVGPVKDQGNCNASYAFAAISAIESMYAIANGQLLSFSEQQIIDC---LGGC 127 Query: 197 N-GGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPY---NEG 252 P A+ + + GI YP+ G + EK Y +K + Y +E Sbjct: 128 AIESDPMMAMTYLERKGIETYTDYPFVG-----KKNEKCEYDSKKAYLILDDTYDMSDES 182 Query: 253 ALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPC-----GNKVDHAVAAVGY----GPNY 303 L I + + F Y+ GI+ P A+ VGY G NY Sbjct: 183 LALVFIDERGPGLFTMNTPPSFFNYKSGIY-NPTEEECKSTNEKRALTIVGYGNDKGQNY 241 Query: 304 ILIKNSWGT 312 ++K S+GT Sbjct: 242 WIVKGSFGT 250 >Y71H2AM.3 CE26272 (ST.LOUIS) protein_id:AAK29976.1 Length = 716 Score = 71.2 bits (173), Expect = 9e-13 Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 9/116 (7%) Query: 136 EYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGI-IKIRTGNLNEYSEQELLDCDRRSY 194 E++DWR KG V PVK+QG C + AF+ +IE + K G+L +SEQ+L+DCD + Sbjct: 84 EFLDWRDKGIVGPVKDQGKCNASHAFAISSSIESMYAKATNGSLLSFSEQQLIDCDDHGF 143 Query: 195 -GCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPY 249 GC +A+ +GI YPY G +E G + +T G V Y Sbjct: 144 KGCEEQPAINAVSYFIFHGIETEADYPYAG-------KENGKLSNETQGKELVTNY 192 >F32B5.8 CE09855 cysteine proteinase (ST.LOUIS) TR:O01850 protein_id:AAB54210.1 Length = 427 Score = 69.7 bits (169), Expect = 2e-12 Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 28/217 (12%) Query: 133 NIPEYVDWRQKGAVTPV---KNQGS---CGSCWAFSAVVTIEGIIKIRTGNL---NEYSE 183 ++P+ DWR + +NQ CGSCWAF A + I I+ N S Sbjct: 185 DLPKTWDWRDANGINYASADRNQHIPQYCGSCWAFGATSALADRINIKRKNAWPQAYLSV 244 Query: 184 QELLDCDRRSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYC----RSREKGP---Y 236 QE++DC GG P + ++GI + Y+ C R P + Sbjct: 245 QEVIDCSGAGTCVMGGEPGGVYKYAHEHGIPHETCNNYQARDGKCDPYNRCGSCWPGECF 304 Query: 237 AAKTDGVRQVQPYN-----EGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVD 291 + K + +V Y E P++ + AA K F+ Y GGI+ +D Sbjct: 305 SIKNYTLYKVSEYGTVHGYEKMKAEIYHKGPIACGI-AATKAFETYAGGIYKEVTDEDID 363 Query: 292 HAVAAVGYGPN------YILIKNSWGTGWGENGYIRI 322 H ++ G+G + Y + +NSWG WGE+G+ +I Sbjct: 364 HIISVHGWGVDHESGVEYWIGRNSWGEPWGEHGWFKI 400 Database: /data_2/jason/blastdb/wormpep62 Posted date: Sep 3, 2001 2:17 PM Number of letters in database: 8,813,425 Number of sequences in database: 20,085 Lambda K H 0.318 0.138 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6611257 Number of Sequences: 20085 Number of extensions: 311359 Number of successful extensions: 788 Number of sequences better than 1.0e-10: 19 Number of HSP's better than 0.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 741 Number of HSP's gapped (non-prelim): 23 length of query: 345 length of database: 8,813,425 effective HSP length: 44 effective length of query: 301 effective length of database: 7,929,685 effective search space: 2386835185 effective search space used: 2386835185 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 156 (64.7 bits)