BLASTP 2.2.4 [Aug-26-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1036160600-011802-21377 Query= test_result (8 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,220,597 sequences; 388,937,031 total letters Score E Sequences producing significant alignments: (bits) Value gb|NP_065733.1|CYT19 (NM_020682) Cyt19 protein; likely ortholog of r... 31 0.18 emb|XP_053690.4|Cyt19 (XM_053690) similar to Cyt19 protein; likely or... 31 0.18 dbj|NP_056277.2|DKFZP586L0724 (NM_015462) DKFZP586L0724 protein [Homo sapiens... 21 113 pir||T14789 hypothetical protein DKFZp586L0724.1 - human >gi|581... 21 113 prf||XP_064862.2 (XM_064862) similar to pheromone receptor [Homo... 21 152 pdb|BAB13968.1|1 (AK022138) unnamed protein product [Homo sapiens] 21 204 sp|Q16478|GLK5_HUMAN Glutamate receptor, ionotropic kainate 5 pr... 21 204 pat|US|NP_002079.2 (NM_002088) glutamate receptor, ionotropic, kai... 21 204 bbs|NP_079463.2| (NM_025187) hypothetical protein FLJ12076 [Homo... 21 204 gnl|db1|NP_002444.1 (NM_002453) mitochondrial translational initiat... 21 204 ref|XP_051877.1| (XM_051877) similar to NS1-binding protein-like... 20 274 lcl|AAH16829.1| (BC016829) Unknown (protein for IMAGE:413... 20 274 gi|1|gb|NP_065733.1|CYT19 (NM_020682) Cyt19 protein; likely ortholog of r... 31 0.18 gi|2|emb|XP_053690.4|Cyt19 (XM_053690) similar to Cyt19 protein; likely or... 31 0.18 gi|3|dbj|NP_056277.2|DKFZP586L0724 (NM_015462) DKFZP586L0724 protein [Homo sapiens... 21 113 gi|4|pir||T14789 hypothetical protein DKFZp586L0724.1 - human >gi|581... 21 113 gi|5|prf||XP_064862.2 (XM_064862) similar to pheromone receptor [Homo... 21 152 gi|6|pdb|BAB13968.1|1 (AK022138) unnamed protein product [Homo sapiens] 21 204 gi|7|sp|Q16478|GLK5_HUMAN Glutamate receptor, ionotropic kainate 5 pr... 21 204 gi|8|pat|US|NP_002079.2 (NM_002088) glutamate receptor, ionotropic, kai... 21 204 gi|9|bbs|NP_079463.2| (NM_025187) hypothetical protein FLJ12076 [Homo... 21 204 gi|10|gnl|db1|NP_002444.1 (NM_002453) mitochondrial translational initiat... 21 204 gi|11|ref|XP_051877.1| (XM_051877) similar to NS1-binding protein-like... 20 274 gi|12|lcl|AAH16829.1| (BC016829) Unknown (protein for IMAGE:413... 20 274 MY_test_ID (BC016829) Unknown (protein for IMAGE:413... 20 274 ALIGNMENTS >pir||T14789 hypothetical protein DKFZp586L0724.1 - human emb|CAB53709.1| (AL110271) hypothetical protein [Homo sapiens] gb|AAH01726.1|AAH01726 (BC001726) Similar to DKFZP586L0724 protein [Homo sapiens] Length = 314 Score = 21.4 bits (43), Expect = 113 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LMFDANFT 8 L+ DANFT Sbjct: 247 LLLDANFT 254 >gb|NP_065733.1|CYT19 (NM_020682) Cyt19 protein; likely ortholog of rat methyltransferase Cyt19; S-adenosylmethionine:arsenic (III) methyltransferase [Homo sapiens] gb|AAG09731.1|AF226730_1 (AF226730) Cyt19 [Homo sapiens] Length = 338 Score = 30.8 bits (65), Expect = 0.18 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LMFDANFT 8 LMFDANFT Sbjct: 286 LMFDANFT 293 >emb|XP_053690.4|Cyt19 (XM_053690) similar to Cyt19 protein; likely ortholog of rat methyltransferase Cyt19; S-adenosylmethionine:arsenic (III) methyltransferase [Homo sapiens] Length = 375 Score = 30.8 bits (65), Expect = 0.18 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LMFDANFT 8 LMFDANFT Sbjct: 286 LMFDANFT 293 >dbj|NP_056277.2|DKFZP586L0724 (NM_015462) DKFZP586L0724 protein [Homo sapiens] dbj|BAB14647.1| (AK023702) unnamed protein product [Homo sapiens] Length = 719 Score = 21.4 bits (43), Expect = 113 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LMFDANFT 8 L+ DANFT Sbjct: 652 LLLDANFT 659 >prf||XP_064862.2 (XM_064862) similar to pheromone receptor [Homo sapiens] Length = 370 Score = 21.0 bits (42), Expect = 152 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 MFDAN 6 MFDAN Sbjct: 348 MFDAN 352 >pdb|BAB13968.1|1 (AK022138) unnamed protein product [Homo sapiens] Length = 258 Score = 20.6 bits (41), Expect = 204 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 LMFDA 5 LMFDA Sbjct: 45 LMFDA 49 >sp|Q16478|GLK5_HUMAN Glutamate receptor, ionotropic kainate 5 precursor (Glutamate receptor KA-2) (KA2) (Excitatory amino acid receptor 2) (EAA2) pir||I57936 glutamate receptor subunit - human gb|AAB22591.1| (S40369) glutamate receptor subunit; EAA2; excitatory amino acid receptor 2 [Homo sapiens] Length = 980 Score = 20.6 bits (41), Expect = 204 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 LMFDA 5 LMFDA Sbjct: 306 LMFDA 310 >pat|US|NP_002079.2 (NM_002088) glutamate receptor, ionotropic, kainate 5 [Homo sapiens] emb|CAC80547.1| (AJ249209) kainate receptor subunit KA2a [Homo sapiens] Length = 981 Score = 20.6 bits (41), Expect = 204 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 LMFDA 5 LMFDA Sbjct: 306 LMFDA 310 >bbs|NP_079463.2| (NM_025187) hypothetical protein FLJ12076 [Homo sapiens] sp|Q9BSU1|U183_HUMAN UPF0183 protein gb|AAH04556.1|AAH04556 (BC004556) Similar to CG7083 gene product [Homo sapiens] gb|AAK96888.1| (AF176088) lin-10-like protein [Homo sapiens] Length = 422 Score = 20.6 bits (41), Expect = 204 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 LMFDA 5 LMFDA Sbjct: 67 LMFDA 71 Score = 16.8 bits (32), Expect = 2880 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 2 MFDAN 6 +FDAN Sbjct: 296 LFDAN 300 >gnl|db1|NP_002444.1 (NM_002453) mitochondrial translational initiation factor 2 precursor; IF-2mt [Homo sapiens] sp|P46199|IF2M_HUMAN Translation initiation factor IF-2, mitochondrial precursor (IF-2Mt) (IF-2(Mt)) pir||A55628 translation initiation factor IF-2 precursor, mitochondrial - human gb|AAA67038.1| (L34600) initiation factor 2 [Homo sapiens] gb|AAM14617.1|AF494407_1 (AF494407) mitochondrial translation-initiation factor 2 [Homo sapiens] gb|AAM70196.1| (AF495546) translation initiation factor 2 [Homo sapiens] Length = 727 Score = 20.6 bits (41), Expect = 204 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 LMFDAN 6 LMFD N Sbjct: 398 LMFDEN 403 >ref|XP_051877.1| (XM_051877) similar to NS1-binding protein-like protein [Homo sapiens] dbj|BAA74873.1| (AB020657) KIAA0850 protein [Homo sapiens] emb|CAB72329.1| (AL078644) bG279B7.1.1 (NS1-binding protein (KIAA0850, BTB/POZ domain and Kelch motifs containing protein)) [Homo sapiens] gb|AAG43485.1| (AF205218) NS1-binding protein-like protein [Homo sapiens] Length = 642 Score = 20.2 bits (40), Expect = 274 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%) Query: 1 LMF-DANF 7 LMF D NF Sbjct: 7 LMFEDENF 14 >lcl|AAH16829.1| (BC016829) Unknown (protein for IMAGE:4132295) [Homo sapiens] Length = 391 Score = 20.2 bits (40), Expect = 274 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FDANFT 8 FD NFT Sbjct: 32 FDTNFT 37 >gi|1|gb|NP_065733.1|CYT19 (NM_020682) Cyt19 protein; likely ortholog of rat methyltransferase Cyt19; S-adenosylmethionine:arsenic (III) methyltransferase [Homo sapiens] gb|AAG09731.1|AF226730_1 (AF226730) Cyt19 [Homo sapiens] Length = 338 Score = 30.8 bits (65), Expect = 0.18 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LMFDANFT 8 LMFDANFT Sbjct: 286 LMFDANFT 293 >gi|2|emb|XP_053690.4|Cyt19 (XM_053690) similar to Cyt19 protein; likely ortholog of rat methyltransferase Cyt19; S-adenosylmethionine:arsenic (III) methyltransferase [Homo sapiens] Length = 375 Score = 30.8 bits (65), Expect = 0.18 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LMFDANFT 8 LMFDANFT Sbjct: 286 LMFDANFT 293 >gi|3|dbj|NP_056277.2|DKFZP586L0724 (NM_015462) DKFZP586L0724 protein [Homo sapiens] dbj|BAB14647.1| (AK023702) unnamed protein product [Homo sapiens] Length = 719 Score = 21.4 bits (43), Expect = 113 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LMFDANFT 8 L+ DANFT Sbjct: 652 LLLDANFT 659 >gi|4|pir||T14789 hypothetical protein DKFZp586L0724.1 - human emb|CAB53709.1| (AL110271) hypothetical protein [Homo sapiens] gb|AAH01726.1|AAH01726 (BC001726) Similar to DKFZP586L0724 protein [Homo sapiens] Length = 314 Score = 21.4 bits (43), Expect = 113 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LMFDANFT 8 L+ DANFT Sbjct: 247 LLLDANFT 254 >gi|5|prf||XP_064862.2 (XM_064862) similar to pheromone receptor [Homo sapiens] Length = 370 Score = 21.0 bits (42), Expect = 152 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 MFDAN 6 MFDAN Sbjct: 348 MFDAN 352 >gi|6|pdb|BAB13968.1|1 (AK022138) unnamed protein product [Homo sapiens] Length = 258 Score = 20.6 bits (41), Expect = 204 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 LMFDA 5 LMFDA Sbjct: 45 LMFDA 49 >gi|7|sp|Q16478|GLK5_HUMAN Glutamate receptor, ionotropic kainate 5 precursor (Glutamate receptor KA-2) (KA2) (Excitatory amino acid receptor 2) (EAA2) pir||I57936 glutamate receptor subunit - human gb|AAB22591.1| (S40369) glutamate receptor subunit; EAA2; excitatory amino acid receptor 2 [Homo sapiens] Length = 980 Score = 20.6 bits (41), Expect = 204 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 LMFDA 5 LMFDA Sbjct: 306 LMFDA 310 >gi|8|pat|US|NP_002079.2 (NM_002088) glutamate receptor, ionotropic, kainate 5 [Homo sapiens] emb|CAC80547.1| (AJ249209) kainate receptor subunit KA2a [Homo sapiens] Length = 981 Score = 20.6 bits (41), Expect = 204 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 LMFDA 5 LMFDA Sbjct: 306 LMFDA 310 >gi|9|bbs|NP_079463.2| (NM_025187) hypothetical protein FLJ12076 [Homo sapiens] sp|Q9BSU1|U183_HUMAN UPF0183 protein gb|AAH04556.1|AAH04556 (BC004556) Similar to CG7083 gene product [Homo sapiens] gb|AAK96888.1| (AF176088) lin-10-like protein [Homo sapiens] Length = 422 Score = 20.6 bits (41), Expect = 204 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 LMFDA 5 LMFDA Sbjct: 67 LMFDA 71 Score = 16.8 bits (32), Expect = 2880 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 2 MFDAN 6 +FDAN Sbjct: 296 LFDAN 300 >gi|10|gnl|db1|NP_002444.1 (NM_002453) mitochondrial translational initiation factor 2 precursor; IF-2mt [Homo sapiens] sp|P46199|IF2M_HUMAN Translation initiation factor IF-2, mitochondrial precursor (IF-2Mt) (IF-2(Mt)) pir||A55628 translation initiation factor IF-2 precursor, mitochondrial - human gb|AAA67038.1| (L34600) initiation factor 2 [Homo sapiens] gb|AAM14617.1|AF494407_1 (AF494407) mitochondrial translation-initiation factor 2 [Homo sapiens] gb|AAM70196.1| (AF495546) translation initiation factor 2 [Homo sapiens] Length = 727 Score = 20.6 bits (41), Expect = 204 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 LMFDAN 6 LMFD N Sbjct: 398 LMFDEN 403 >gi|11|ref|XP_051877.1| (XM_051877) similar to NS1-binding protein-like protein [Homo sapiens] dbj|BAA74873.1| (AB020657) KIAA0850 protein [Homo sapiens] emb|CAB72329.1| (AL078644) bG279B7.1.1 (NS1-binding protein (KIAA0850, BTB/POZ domain and Kelch motifs containing protein)) [Homo sapiens] gb|AAG43485.1| (AF205218) NS1-binding protein-like protein [Homo sapiens] Length = 642 Score = 20.2 bits (40), Expect = 274 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%) Query: 1 LMF-DANF 7 LMF D NF Sbjct: 7 LMFEDENF 14 >gi|12|lcl|AAH16829.1| (BC016829) Unknown (protein for IMAGE:4132295) [Homo sapiens] Length = 391 Score = 20.2 bits (40), Expect = 274 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FDANFT 8 FD NFT Sbjct: 32 FDTNFT 37 >MY_test_ID (BC016829) Unknown (protein for IMAGE:4132295) [Homo sapiens] Length = 391 Score = 20.2 bits (40), Expect = 274 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FDANFT 8 FD NFT Sbjct: 32 FDTNFT 37 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Oct 31, 2002 3:52 AM Number of letters in database: 388,937,031 Number of sequences in database: 1,220,597 Lambda K H 0.328 0.274 1.77 Gapped Lambda K H 0.294 0.110 0.610 Matrix: PAM30 Gap Penalties: Existence: 9, Extension: 1 Number of Hits to DB: 660,045 Number of Sequences: 1220597 Number of extensions: 3731 Number of successful extensions: 3028 Number of sequences better than 200000.0: 2850 Number of HSP's better than 200000.0 without gapping: 2850 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3028 length of query: 8 length of database: 35,444,647 effective HSP length: 0 effective length of query: 9 effective length of database: 35,444,647 effective search space: 319001823 effective search space used: 319001823 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 35 (14.8 bits) X3: 58 (24.6 bits) S1: 18 (10.4 bits) S2: 18 (10.8 bits)