AS 1 27

CO contig00001 203 27 38 U
gTAGGACttga*CGTC*GgAGCt**GgATTt*AGCTC*C*CTG*AaTGTT
*cGg*ATGGAAATGT*GCT*GA*CcTGg***TtGGGGA*t*Acc**a*Gg
*TCGAa**GAATCtgTT*Attt**CGTGCag*ACg*AA*TTttCCcTTCg
Aa*ct*GGAtGa*G*cA*Ca*TGgA*G*ATGAGg**TtCCCcATt*TTC*
gTG

BQ
8 64 64 64 64 64 64 29 5 29 29 64 64 64 64 64 10 64 64 64 22 64 8 64 64 64 11 64 64 64 64 64 64 64 64 64 64 19 64 64 64 64 0 64 19 64 64 64 64 64 
64 64 64 64 64 64 64 64 64 64 64 14 47 64 16 64 21 64 64 64 64 64 25 47 25 20 25 64 25 64 64 64 64 14 41 64 64 64 64 16 25 64 64 64 39 16 5 64 64 64 
64 64 12 12 64 64 17 64 64 64 58 23 5 64 49 7 64 64 64 21 64 8 21 21 64 64 64 29 64 29 64 35 55 64 20 64 64 19 55 64 64 64 64 64 64 9 64 11 64 64 
64 10 64 64 20 64 64 64 25 64 64 

AF species2703|6185 U 102
AF species2004|3290 U -18
AF species2702|8138 U -3
AF species2788|6026 U 122
AF species3098|4869 U 117
AF species1827|9888 U 171
AF species2742|48 U 28
AF species2011|1996 U -28
AF species3089|7597 U 149
AF species1961|5108 U 84
AF species2011|4145 U 150
AF species1667|4956 U -3
AF species980|9980 U 143
AF species2907|6509 U 170
AF species1973|7670 U 77
AF species2779|6708 U -9
AF species2024|3244 U 101
AF species2216|7882 U 112
AF species1037|7115 U 27
AF species2742|9239 U 23
AF species1961|9433 U 27
AF species158|7890 U 8
AF species2703|5769 U 182
AF species2119|1909 U 113
AF species2739|2104 U 57
AF species1635|5973 U 8
AF species2066|9064 U 25

BS 1 7 species2702|8138
BS 8 24 species1635|5973
BS 25 25 species2702|8138
BS 26 26 species1635|5973
BS 27 27 species2702|8138
BS 28 75 species1635|5973
BS 76 76 species2739|2104
BS 77 78 species1635|5973
BS 79 79 species2739|2104
BS 80 80 species1635|5973
BS 81 81 species2739|2104
BS 82 82 species1635|5973
BS 83 83 species2739|2104
BS 84 89 species1635|5973
BS 90 91 species2739|2104
BS 92 107 species1635|5973
BS 108 109 species2739|2104
BS 110 121 species1635|5973
BS 122 122 species2742|9239
BS 123 129 species1635|5973
BS 130 130 species2739|2104
BS 131 131 species1635|5973
BS 132 132 species2739|2104
BS 133 137 species1635|5973
BS 138 142 species2739|2104
BS 143 143 species3098|4869
BS 144 159 species2739|2104
BS 160 160 species2119|1909
BS 161 164 species1973|7670
BS 165 166 species2119|1909
BS 167 175 species1973|7670
BS 176 181 species2119|1909
BS 182 184 species2703|5769
BS 185 185 species2119|1909
BS 186 191 species2703|5769
BS 192 192 species2119|1909
BS 193 198 species2703|5769
BS 199 203 species2119|1909

RD species2703|6185 108 0 0
TGGGGATACCAAGTCGAAGAATCGCTGATTCTTGCACTGGTATTTTCCCT
CGAACTGGATAAG*CA*C*GTGGA*G*ATGAGGG*TTCCC*ATT*TTGGT
GTAGTTCT

QA 61 97 61 97
DS CHROMAT_FILE: species2703|6185 PHD_FILE: species2703|6185.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species2004|3290 122 0 0
TGTCTCCGTCCTTCTCCAGATAGGACTT*AACGTCTG*AGCTT*G*ATTT
*AGCTC*C*CTG*AATGTT*CGG*ATGGAAATGT*GCT*GA*CCTGG***
TTGGGGAC**ACC**A*GG*TC

QA 21 122 21 122
DS CHROMAT_FILE: species2004|3290 PHD_FILE: species2004|3290.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species2702|8138 125 0 0
CCAGGTAGGACTTGA*CGTC*GGAGCT**GGATTT*AGCTC*C*CTG*AA
TGTT*CGG*ATGGAAATGT*GCT*GA*CCTGG***TTGGGGA**GACC**
A*GG*TCGAA**GAATCTGTT*ATT

QA 5 125 5 125
DS CHROMAT_FILE: species2702|8138 PHD_FILE: species2702|8138.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species2788|6026 114 0 0
TTATTTGTGCATTGGAA*TTTTCC*TTC*AAA*TTGGATGA*G*CA*C*G
TGGA**TATGAGG**TTCCCCATT*TTCA*TGAAGCTCTCTACACACTCT
AATGAATAATTTAG

QA 14 82 14 82
DS CHROMAT_FILE: species2788|6026 PHD_FILE: species2788|6026.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species3098|4869 110 0 0
ATCTGTTATTTTTGCACTGGAA*TTTTCC*TTC*AAA*TTGGATGA*G**
AACA*TGGA**TATGCGGAGACCCATCTTCGTGAAGCTCTCTGCAGATTT
TTATGAATTT

QA 19 65 19 65
DS CHROMAT_FILE: species3098|4869 PHD_FILE: species3098|4869.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species1827|9888 104 0 0
ACGTGGATATGAGGGCT*CCC*AT*CTTC*GTGAAGCTCTCTGCAGATTT
TGATGTATTTTTTGTTGGTTGGGGTTTCTAGGTTTTGAAGTTGGGAGAGT
GCTT

QA 9 33 9 33
DS CHROMAT_FILE: species1827|9888 PHD_FILE: species1827|9888.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species2742|48 120 0 0
CTTTTAGCTC*C*CTG*AATGTTT*GG*ATGGAAATGT*GCT*GA*CCTG
G***TTGGGGA*T*A**TGA*G*ATCGAA**GAATCT*TTGATTTTTACA
CTGGAATTTCCCTTCGAATT

QA 2 97 2 97
DS CHROMAT_FILE: species2742|48 PHD_FILE: species2742|48.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species2011|1996 116 0 0
CATTCCAGTGTGTCTCCGTCCTTGGTAATGTATGTTTTGA*CGTC*GGAG
CT**GGATTT*AGCTC*C*CTGTA*TGTT*CGG*ATGGAAATGT*GCT*G
A*CCTGG***TTGGGG

QA 37 116 37 116
DS CHROMAT_FILE: species2011|1996 PHD_FILE: species2011|1996.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species3089|7597 112 0 0
CGAA*CT*GGATGA*G*CA*CA*TGGA*G*ATGAGGGCT*CCC*AT*CTT
C*GTGCAGTTCTCTGCAGATCTTGATGAATTTTTTATTTGTTGGTGTTTC
TAGGTTTTGTAA

QA 1 55 1 55
DS CHROMAT_FILE: species3089|7597 PHD_FILE: species3089|7597.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species1961|5108 110 0 0
GG**A*TG***TGA*GG*TC*AAA*GAATCTGTTGTTTTGGCATTTGAAT
TTTCCTTCGAACTGGATGAGAACATGCAAGTGAGGAGTCCCATTTTCATG
AAGCTCTCTG

QA 1 31 1 31
DS CHROMAT_FILE: species1961|5108 PHD_FILE: species1961|5108.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species2011|4145 109 0 0
TTCGAATTGGACAAG*CA*C*GTGGA*G*ATGAGG**TTCCCCATT*TTC
A*TGCAACTCTCTGCAGATCTTGATGAATTTCTTGTCTACTGGTGTGTTT
AGGTTTTGT

QA 13 54 13 54
DS CHROMAT_FILE: species2011|4145 PHD_FILE: species2011|4145.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species1667|4956 120 0 0
TTTTTCCATGTATGTTTTAACATCTGTTGAGCTTTTAGCTC*C*CTG*AA
TGTT*CGG*ATGGAAATGT*GCT*GATC**GGG**TTGGGGA*TG***TG
A*G*ATCGAA**GAATCT*T

QA 33 120 33 120
DS CHROMAT_FILE: species1667|4956 PHD_FILE: species1667|4956.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species980|9980 109 0 0
ATTTCCCTTCGAATTGTATAAG*CA*CA*TGGA*G*ATGAGG**TTCCCC
ATT*TTC*GTGTAGCTCTCTAGCTACTTTTATGTATTTTTTATTTGTTGG
TGTTTGTAG

QA 20 61 20 61
DS CHROMAT_FILE: species980|9980 PHD_FILE: species980|9980.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species2907|6509 107 0 0
A*TGGA*G*ATGAGGGCT*CCC*AT*CTTC*GTGCAGCTCTCTACAGATT
TTGATATATTTTTTATTTGTTGGGGTTTGTAGAGGTTTTAATTGGGAAAG
TGCTTCT

QA 1 34 1 34
DS CHROMAT_FILE: species2907|6509 PHD_FILE: species2907|6509.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species1973|7670 104 0 0
CGGATGGAAATATGCTGACTGGGAAGGGGACACCAGGTCGAAGAATCTGT
AATTTGTGCATTGGTATTTGCCTTCGAACTGAATGA*GT*A*CA*TGGAT
ATGA

QA 85 99 85 99
DS CHROMAT_FILE: species1973|7670 PHD_FILE: species1973|7670.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species2779|6708 124 0 0
CTTTCTCGACGTAGGACTTGA*CGTC*GGAGCT**GGATTT*AGCTC*C*
CTG*AATGTT*CGG*ATGGAAATGTA**TTGA*CCTGG***TTGGGGAC*
*ACC**A*G*ATCGAA**GAATCT

QA 11 124 11 124
DS CHROMAT_FILE: species2779|6708 PHD_FILE: species2779|6708.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species2024|3244 112 0 0
GGGATACGAGGTCGAAGAATCTGTTATTTTTGCACTTGTATTTCCCTTCG
AA*CT*GGATGA*G*CA*C*GTG*AAG*ATGAGG**TTCCCCATT*TTCA
*TGAAACTCTCT

QA 49 103 49 103
DS CHROMAT_FILE: species2024|3244 PHD_FILE: species2024|3244.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species2216|7882 110 0 0
TCTGTT*ATT***CGTGCAG*ACG*AACTT**CCCTTCGAA*CT*GGATA
AGAACGTGGATATGCGGAGACCCATCTTCGTGCAACTCTCTACAAATTTT
GATAAATTTC

QA 1 49 1 49
DS CHROMAT_FILE: species2216|7882 PHD_FILE: species2216|7882.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species1037|7115 119 0 0
GCTTTTAGCTC*C*CTG*AATGTTT*GG*ATGGAAATGT*GCT*GATC*T
GG***TTGGGGA*T*ACC**AA**ATCGAA**GAATCGTTGATTGTGGCA
TTTGAATTTGCCTTCGAAC

QA 3 87 3 87
DS CHROMAT_FILE: species1037|7115 PHD_FILE: species1037|7115.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species2742|9239 120 0 0
ATGAGCTTTTAGCTC*C*CTG*AATGTTT*GG*ATGGAAATGT*GCT*GA
*CCTGG***TTGGGGA*T*A**TGA*G*ATCGAA**GAATCT*TTGATTT
TTACACTGGAATTTCCCTTC

QA 7 102 7 102
DS CHROMAT_FILE: species2742|9239 PHD_FILE: species2742|9239.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species1961|9433 119 0 0
GCTTTTAGCTC*C*CTG*AATGTTT*GG*ATGGAAATGT*GCT*GA*CCT
G**C*TTGGGGA*TG***TGA*GG*TC*AAA*GAATCTGTTGTTTTGGCA
TTTGAATTTTCCTTCGAAC

QA 3 88 3 88
DS CHROMAT_FILE: species1961|9433 PHD_FILE: species1961|9433.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species158|7890 125 0 0
T*GA*CGTC*GGAGCT**GGATTT*AGCTC**TCTG*AATGTTT*GG*AT
GGAAATGT*GCT*GA*CCTGG***TTGGGGA*T*ACC**A*GG*TCGAA*
T*AATCTGATATTTGTGATCTGAAC

QA 1 108 1 108
DS CHROMAT_FILE: species158|7890 PHD_FILE: species158|7890.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species2703|5769 103 0 0
AGGG*TTCCC*ATT*TTGGTGTAGTTCTCGACAGATTTTGATGTATTTTT
TGTTTGTTGGTGTATCTAGGGCTTTTATTTTTTCAAGGGTTTCTTCTTTG
GCG

QA 1 17 1 17
DS CHROMAT_FILE: species2703|5769 PHD_FILE: species2703|5769.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species2119|1909 110 0 0
AATTAATGGCATTTGCGTATGAATCGTTGGCAGATTGGCAACCTCCTTGA
*G*CA*CA*TGGA*G*ATGAGG**TTCCCCAT*CTTC*GTGTAATTCTCT
GGAAACCCTA

QA 48 91 48 91
DS CHROMAT_FILE: species2119|1909 PHD_FILE: species2119|1909.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species2739|2104 124 0 0
TGGAAATGT*GCT*GA*CCTGG***TTGGGGA*T*ACC**A*GG*TCGAA
**GAATCTGTT*ATT***CGTGCAG*ACG*AA*TTT*CCCTTCGAA*CT*
GGAGTAACACGTGGAGATGAGGGC

QA 1 103 1 103
DS CHROMAT_FILE: species2739|2104 PHD_FILE: species2739|2104.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species1635|5973 130 0 0
TTGA*CGTC*GGAGCT*CG*ATTT*AGCTC*C*CTG*AATGTT*CGG*AT
GGAAATGT*GCT*GA*CC*GGG*AT*GGGGA**GACC**A*GG*TCGAA*
T*AATCTGTT*ATT***CGTGC*GGACG*A

QA 1 130 1 130
DS CHROMAT_FILE: species1635|5973 PHD_FILE: species1635|5973.phd.1 TIME: Thu Jul 27 12:33:48 2000

RD species2066|9064 119 0 0
GAGCTTTTAGC*CGC*CTG*AATGTT**GGGATGGAAATGT*GCT*GA*C
CTG**C*TTGGGGA*T*AC*T*A*GG*TCGAA**GAATCGTTGATTTGTG
CAGTTGTATTTCCCCTCGA

QA 5 89 5 89
DS CHROMAT_FILE: species2066|9064 PHD_FILE: species2066|9064.phd.1 TIME: Thu Jul 27 12:33:48 2000