Query= AE000111.1 Escherichia coli K-12 MG1655 section 1 of 400 of the
complete genome
         (720 letters)

>AK1H_ECOLI P00561 Bifunctional aspartokinase/homoserine
           dehydrogenase I (AKI-HDI) [Includes: Aspartokinase I ;
           Homoserine dehydrogenase I ]
          Length = 820

 Score =  248 bits (634), Expect = 2e-70
 Identities = 128/128 (100%), Positives = 128/128 (100%)
 Frame = -1

Query: 384 MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTISGQDA 205
           MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTISGQDA
Sbjct: 1   MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTISGQDA 60

Query: 204 LPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIKHVLHGISLLGQCPDSINA 25
           LPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIKHVLHGISLLGQCPDSINA
Sbjct: 61  LPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIKHVLHGISLLGQCPDSINA 120

Query: 24  ALICRGEK 1
           ALICRGEK
Sbjct: 121 ALICRGEK 128



 Score = 19.2 bits (38), Expect = 0.29
 Identities = 15/57 (26%), Positives = 28/57 (48%)
 Frame = -1

Query: 420 LFFSTKGNEVTTMRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITN 250
           + F+T  ++V  + V+  GG   A  E+  R    L++     +V  V ++ A +TN
Sbjct: 458 MLFNT--DQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKALLTN 512



 Score = 18.5 bits (36), Expect = 0.49
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = -1

Query: 360 TSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAM 235
           T +   E+ L V   LES     +    ++A     +H+V M
Sbjct: 146 TVIDPVEKLLAVGHYLESTVDIAESTRRIAASRIPADHMVLM 187



 Score = 17.7 bits (34), Expect = 0.84
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -1

Query: 267 PAKITNHLVAMIEKTISGQDALPNISDAERIFAEL 163
           P K  ++L  M   ++SG      +  A R+FA +
Sbjct: 305 PVKGISNLNNMAMFSVSGPGMKGMVGMAARVFAAM 339



 Score = 15.0 bits (27), Expect = 5.5
 Identities = 5/14 (35%), Positives = 8/14 (56%)
 Frame = -3

Query: 388 NHASVEVRRYISGK 347
           NH    + + ISG+
Sbjct: 45  NHLVAMIEKTISGQ 58



 Score = 15.0 bits (27), Expect = 5.5
 Identities = 5/7 (71%), Positives = 7/7 (99%)
 Frame = +1

Query: 640 PVQKLLS 660
           PV+KLL+
Sbjct: 150 PVEKLLA 156


Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1264
Number of Sequences: 0
Number of extensions: 25
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 820
effective HSP length: 33
effective length of database: 787
effective search space used:   162122
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.3 bits)