Changes
INSTALL
MANIFEST
Makefile.PL
README
GO/Admin.pm
GO/AppHandle.pm
GO/DebugUtils.pm
GO/SqlWrapper.pm
GO/Tango.pm
GO/TestHarness.pm
GO/AppHandles/AppHandleAbstractSqlImpl.pm
GO/AppHandles/AppHandleCWrapper.pm
GO/AppHandles/AppHandleCachingImpl.pm
GO/AppHandles/AppHandleChadoSqlImpl.pm
GO/AppHandles/AppHandlePgImpl.pm
GO/AppHandles/AppHandleSqlImpl.pm
GO/Handlers/db.pm
GO/Handlers/genericdb.pm
GO/Handlers/godb.pm
doc/go-db-perl-doc.html
scripts/GOshell.pl
scripts/go-check-release-tarball.pl
scripts/go-db-show-paths-to-root.pl
scripts/go-dump-rdf-xml.pl
scripts/go-fetch-associations-by-term.pl
scripts/go-find-enriched-terms.pl
scripts/go-get-seqs.pl
scripts/go-manager.pl
scripts/go-prepare-release.pl
scripts/go-tkbrowser.pl
scripts/load-go-into-db.pl
scripts/load-tax-into-db.pl
scripts/load_sp.pl
scripts/process_files_for_ieas.pl
t/d000setup.t
t/d010fetch.t
t/d020mods.t
t/d030alternateids.t
t/d040graph.t
t/d050termclash.t
t/d060fillpath.t
t/d061detect_assoc_err.t
t/d070fillcount.t
t/d080loadxrefs.t
t/d090n_chilodren.t
t/d100species.t
t/d110seq.t
t/d120load_obo.t
t/d130load_obo2.t
t/d140temporal.t
t/d160logicaldef.t
t/d170subset.t
t/t040cwrapper.t
t/t050parent_check.t
t/t060assocs.t
t/t070associations.t
t/t080speed.t
t/t090getroot.t
t/t100shallow.t
t/t110query.t
t/t120querybyproduct.t
t/t130blastout.t
t/t140n_children.t
t/t140seq.t
t/t150deepproduct.t
t/t150n_parents.t
t/t160n_associations.t
t/t170open_graph.t
t/t180sort.t
t/t190term_sort.t
t/t200recursive_close.t
t/t210checkgraph.t
t/t220filter_species_db.t
t/t240wild_card_product_search.t
t/t250species_filter.t
t/t260fetchall.t
t/t270getprod.t
t/t280prd_by_sp.t
t/t290recursiveprods.t
t/t300selectedassocs.t
t/t310noterm.t
t/t320combinedquery.t
t/t320sortxrefs.t
t/t340xml.t
t/t350mgievid.t
t/t360treeiter.t
t/t380iterator.t
t/t390defref.t
t/t400comment.t
t/t410gp_synonyms.t
t/t420selected_gene_products.t
t/t430selected_association_list.t
t/t440godb_prestore.t
t/t450enrichedterm.t
t/data/GO.fake.defs
t/data/anatxp.obo
t/data/baby-component.dat
t/data/baby-function.dat
t/data/baby-process.dat
t/data/biosynth1.obo
t/data/biosynth2.obo
t/data/comp-analysis.obo
t/data/err-fb-assocs.fb
t/data/function-withaltid.dat
t/data/gene_association.GeneDB_Pfalciparum
t/data/gene_association.goa_test
t/data/go-truncated.obo
t/data/goslim_generic.obo
t/data/goslim_generic_v1_2.obo
t/data/llm.obo
t/data/mini-fb-assocs.fb
t/data/muscle.obo
t/data/obo.el
t/data/orthog.obo
t/data/orthog.obo.KEEP
t/data/ribosome.obo
t/data/sgd.blast.out
t/data/temporal.obo
t/data/test-nucleolar.defs
t/data/test-nucleolar.obo
t/data/test-nucleolar.ontology
t/data/test.obo
t/data/test_bad_function.dat
t/data/test_blah2go
t/data/tmp.obo
t/data/xrefs-function.dat
META.yml                                 Module meta-data (added by MakeMaker)