# $Id: obo2owl.pl 1847 2008-01-08 12:38:58Z erant $ # # Module : obo2owl.pl # Purpose : Converts a file from OBO to OWL. # Usage: /usr/bin/perl -w obo2owl.pl my_ontology.obo > my_ontology.owl # License : Copyright (c) 2006, 2007, 2008 Erick Antezana. All rights reserved. # This program is free software; you can redistribute it and/or # modify it under the same terms as Perl itself. # Contact : Erick Antezana # use Carp; use strict; use warnings; BEGIN { push @INC, '..'; # Running without installing 'ONTO-PERL' } use OBO::Parser::OBOParser; my $my_parser = OBO::Parser::OBOParser->new(); my $ontology = $my_parser->work(shift(@ARGV)); $ontology->export(\*STDOUT, "owl"); =head1 NAME obo2owl.pl - OBO to OWL translator. =head1 DESCRIPTION This script transforms an OBO file (spec 1.2) into OWL (cf. oboinowl mapping). =head1 AUTHOR Erick Antezana, Eerant@psb.ugent.beE =head1 COPYRIGHT AND LICENSE Copyright (C) 2006, 2007, 2008 by erant This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself, either Perl version 5.8.7 or, at your option, any later version of Perl 5 you may have available. =cut