# $Id: owl2obo.pl 1847 2008-01-08 12:38:58Z erant $ # # Module : owl2obo.pl # Purpose : Converts a file from OWL to OBO. # Usage: /usr/bin/perl -w owl2obo.pl my_ontology.owl > my_ontology.obo # License : Copyright (c) 2006, 2007, 2008 Erick Antezana. All rights reserved. # This program is free software; you can redistribute it and/or # modify it under the same terms as Perl itself. # Contact : Erick Antezana # use Carp; use strict; use warnings; BEGIN { push @INC, '..'; # Running without installing 'ONTO-PERL' } use OBO::Parser::OWLParser; my $my_parser = OBO::Parser::OWLParser->new(); my $ontology = $my_parser->work(shift(@ARGV)); $ontology->export(\*STDOUT, "obo"); =head1 NAME owl2obo.pl - OWL to OBO translator (oboinowl mapping). =head1 DESCRIPTION This script transforms an OWL file (cf. oboinowl mapping) into an OBO one (spec 1.2). =head1 AUTHOR Erick Antezana, Eerant@psb.ugent.beE =head1 COPYRIGHT AND LICENSE Copyright (C) 2006, 2007, 2008 by erant This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself, either Perl version 5.8.7 or, at your option, any later version of Perl 5 you may have available. =cut