# template auto generated by pptemplate # uncomment commands, copy and fill in as needed # see also the PDL::PP manpage # pp_bless(''); # package namespace of pp_def'ed functions # defaults to 'PDL' # pp_add_boot(''); # code to add to the XS boot section # pp_addhdr(''); # add C code to the section preceding # the first MODULE keyword # pp_addpm(''); # add perl code to the perl module that PP will create # pp_add_exported(''); # add the list of function names # to the list of exported functions # pp_addxs(''); # add plain XS code to the XS section # pp_add_isa(qw//); # inheritance business: add arglist to modules @ISA # pp_def('name', Code => ''); # minimal pp_def to define function # TODO # check sample / return value from func # Check (for lbfgs[b]) ref count # Min/Majuscules # Redo rmn example # optimize without function parameter => pb do('Config.pl'); our $VERSION = 0.03; use PDL::Exporter; pp_setversion(0.03); pp_addhdr(' #include pdl *pdl1, *pdl2, *pdl3, *pdl4, *pdl5; SV *sv_pdl1, *sv_pdl2, *sv_pdl3, *sv_pdl4, *sv_pdl5; #include #include #include #include /* Change names when fixing glibc-2.1 bug */ #ifdef MY_FIXY0 #define y0(a) fixy0(a) extern double fixy0(double a); #endif #ifdef MY_FIXYN #define yn(a,b) fixyn(a,b) extern double fixyn(int a, double b); #endif '); ## handle various cases of 'finite' # if ($^O =~ /MSWin/) { # _finite in VC++ 4.0 pp_addhdr(' #define finite _finite #include /* avoid annoying warnings */ typedef long int logical; typedef long int integer; typedef long int ftnlen; #ifdef __cplusplus typedef float (*paramf)(...); typedef double (*paramd)(...); typedef void (*paramv)(...); #else typedef float (*paramf)(); typedef double (*paramd)(); typedef void (*paramv)(); #endif '); } else{ pp_addhdr(' /* avoid annoying warnings */ typedef int logical; typedef int integer; typedef int ftnlen; #ifdef __cplusplus typedef float (*paramf)(...); typedef double (*paramd)(...); typedef void (*paramv)(...); #else typedef float (*paramf)(); typedef double (*paramd)(); typedef void (*paramv)(); #endif ') } # patch from Albert Chin if ($^O =~ /hpux/) { pp_addhdr(' #ifdef isfinite #define finite isfinite #endif '); } pp_addpm({At=>'Top'},<<'EOD'); use strict; use PDL::Ufunc; use PDL::Ops; use PDL::NiceSlice; use PDL::LinearAlgebra qw/diag tritosym/; { package PDL; use UNIVERSAL 'isa'; # need that later in info function use Carp; } =head1 NAME PDL::Opt::NonLinear -- Non Linear optimization routines =head1 SYNOPSIS use PDL::Opt::NonLinear; $x = random(5); $gx = rosen_grad($x); $fx = rosen($x); $xtol = pdl(1e-16); $gtol = pdl(0.9); $eps = pdl(1e-10); $print = ones(2); $maxit = pdl(long, 200); $info = pdl(long,0); sub fg_func{ my ($f, $g, $x) = @_; $f .= rosen($x); $g .= rosen_grad($x); } cgfam($fx, $gx, $x, $maxit, $eps, $xtol, $gtol,$print,$info,1,\&fg_func); =head1 DESCRIPTION This module provides routine that solves optimization problem: minimize f(x) x Some routines can handle bounds, so: minimize f(x) x subject to low <= x <= up =cut EOD if ($config{PORT3}){ pp_addhdr(' static SV* oned_function; double oned_wrapper(double *f) { dSP ; double ret; int retval; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_2mortal(newSVnv(*f))); PUTBACK ; retval = perl_call_sv(oned_function, G_SCALAR); SPAGAIN; if (retval != 1) croak("Error calling perl function\n"); ret = (double ) POPn ; PUTBACK ; FREETMPS ; LEAVE ; return ret; } static SV* pdl4_function; void dpdl4_wrapper( PDL_Long m, double *a, PDL_Long n, double *b, PDL_Long o, PDL_Long *c, PDL_Long p, double *d) { dSP ; int ret ; PDL_Long odims[1]; PDL_Long adims[] = {m}; PDL_Long bdims[] = {n}; PDL_Long cdims[] = {o}; PDL_Long ddims[] = {p}; PDL->setdims (pdl1, adims, 1); PDL->setdims (pdl2, bdims, 1); PDL->setdims (pdl3, cdims, 1); PDL->setdims (pdl4, ddims, 1); pdl1->datatype = PDL_D; pdl1->data = a; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl2->datatype = PDL_D; pdl2->data = b; pdl2->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl3->datatype = PDL_L; pdl3->data = c; pdl3->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl4->datatype = PDL_D; pdl4->data = d; pdl4->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl1); XPUSHs(sv_pdl2); XPUSHs(sv_pdl3); XPUSHs(sv_pdl4); PUTBACK ; ret = perl_call_sv(pdl4_function, G_SCALAR); SPAGAIN; if (ret !=1) croak("Error calling perl function\n"); // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; PDL->setdims (pdl2, odims, 0); pdl2->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl2->data=NULL; PDL->setdims (pdl3, odims, 0); pdl3->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl3->data=NULL; PDL->setdims (pdl4, odims, 0); pdl4->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl4->data=NULL; PUTBACK ; FREETMPS ; LEAVE ; } void fpdl4_wrapper( PDL_Long m, float *a, PDL_Long n, float *b, PDL_Long o, PDL_Long *c, PDL_Long p, float *d) { dSP ; int ret ; PDL_Long odims[1]; PDL_Long adims[] = {m}; PDL_Long bdims[] = {n}; PDL_Long cdims[] = {o}; PDL_Long ddims[] = {p}; PDL->setdims (pdl1, adims, 1); PDL->setdims (pdl2, bdims, 1); PDL->setdims (pdl3, cdims, 1); PDL->setdims (pdl4, ddims, 1); pdl1->datatype = PDL_F; pdl1->data = a; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl2->datatype = PDL_F; pdl2->data = b; pdl2->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl3->datatype = PDL_L; pdl3->data = c; pdl3->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl4->datatype = PDL_F; pdl4->data = d; pdl4->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl1); XPUSHs(sv_pdl2); XPUSHs(sv_pdl3); XPUSHs(sv_pdl4); PUTBACK ; ret = perl_call_sv(pdl4_function, G_SCALAR); SPAGAIN; if (ret !=1) croak("Error calling perl function\n"); // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; PDL->setdims (pdl2, odims, 0); pdl2->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl2->data=NULL; PDL->setdims (pdl3, odims, 0); pdl3->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl3->data=NULL; PDL->setdims (pdl4, odims, 0); pdl4->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl4->data=NULL; PUTBACK ; FREETMPS ; LEAVE ; } static SV* doubler_function; double np_wrapper(integer *n, double *p) { dSP ; int pret; double ret; PDL_Long odims[1]; PDL_Long dims[] = {*n}; PDL->setdims (pdl1, dims, 1); pdl1->datatype = PDL_D; pdl1->data = p; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl1); PUTBACK ; pret = perl_call_sv(doubler_function, G_SCALAR); SPAGAIN; if (pret !=1) croak("Error calling perl function\n"); // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; ret = (double ) POPn ; PUTBACK ; FREETMPS ; LEAVE ; return ret; } '); pp_def("fmin", HandleBad => 0, Pars => '[phys]a();[phys]b();[phys]tol();[o,phys]y();[o,phys]x()', OtherPars => "SV* min_func" , GenericTypes => [F,D], Code =>' types(F) %{ extern float fmin_(paramf f, float *X, float *A, float *B, float *T); %} types(D) %{ extern double dfmin_(paramd f, double *X, double *A,double *B, double *T); %} oned_function = $PRIV(min_func); $y() = $TFD(fmin_,dfmin_)(oned_wrapper, $P(x), $P(a),$P(b),$P(tol)); ', Doc =>' =for ref Finds an approximation x to the point in the interval (a,b) at which f attains its minimum, and returns the value of f in x. Uses algorithm from Brent (1973). a,b: Interval bounds. tol: Tolerance (computer smallest floating-point constant if < 0). y: On exit, contains an approximation of the minimum. x: On exit, contains an approximation to the point in the interval at which f(x) attains a (local) minimum. min_func: Function to be mimimized (scalar on entry and exit). =for example sub test{ $a = pdl(shift); $a = -$a * exp(-$a); $a->sclr; } fmin(pdl(0.8),pdl(1.2),pdl(-1),($y=null), ($x=null),\&test); print "Minimum $y founds at $x\n"; '); pp_def("smnsx", HandleBad => 0, Pars => '[io,phys]x(n);[io,phys]step();[io,phys]tol();[o,phys]y()', OtherPars => "SV* simplex_func" , GenericTypes => [D], Code =>' integer old, new,err; extern double dsmnsx_(paramd f, integer *p, double *step, double *tol,double *X); extern void erroff_(void); extern void eprint_(void); extern integer* nerror_(integer *err); extern void entsrc_(integer *old, integer *new); //TODO istkgt istkin: stack doubler_function = $PRIV(simplex_func); new = 1; entsrc_(&old, &new); $y() = dsmnsx_(np_wrapper, &$PRIV(__n_size), $P(step), $P(tol),$P(x)); nerror_(&err); if (err > 0 ) eprint_(); erroff_(); ', Doc =>' =for ref Nelder-Mead simplex method (pattern search) for unconstrained minimization. Simple to use version of mnsx. x: Parameter vector, on entry initial guess, on exit best parameter found. step: Initial and final size of the step used in computing initial simplex. (See library documentation for more details) On exit the maximum width in any coordinate direction of the final simplex. tol: Initial and final stopping tolerance. (standard deviation of the function values at the simplex) simplex_func: Function to be minimized. PDL in entry, scalar on exit. =for example $x = random(5); sub test{ my $a = shift; my $b = rosen($a); $b->sclr; } $step = pdl(0.5); $tol = pdl(1e-16); $x->smnsx($step,$tol,($y = null), \&test); print "Minimum $y found at $x with a tolerance of $tol"; '); pp_def("mnsx", HandleBad => 0, Pars => '[io,phys]x(n);[io,phys]vertices(n,pp);int [phys]maxit(); [io,phys]tol();[o,phys]y()', OtherPars => "SV* simplex_func" , GenericTypes => [D], Code =>' integer old, new,err; extern double dmnsx_(paramd f, integer *itmx, integer *p, integer *pp, double *s, double *tol,double *X); extern void erroff_(void); extern void eprint_(void); extern integer* nerror_(integer *err); extern void entsrc_(integer *old, integer *new); //TODO istkgt istkin: stack doubler_function = $PRIV(simplex_func); new = 1; entsrc_(&old, &new); $y() = dmnsx_(np_wrapper, $P(maxit), &$PRIV(__n_size), &$PRIV(__n_size), $P(vertices), $P(tol), $P(x)); nerror_(&err); if (err > 0 ) eprint_(); erroff_(); ', Doc =>' =for ref Nelder-Mead simplex method (pattern search) for unconstrained minimization with input vertices. x: Parameter vector, on entry initial guess, on exit best parameter found. vertices: Vertice of the initial and final simplex, length (n+1,n), must be transposed.(Fortran storage type). maxit: Maximum number of iterations. tol: Initial and final stopping tolerance. (standard deviation of the function values at the simplex) simplex_func: Function to be minimized. PDL in entry, scalar on exit. =for example $x = random(5); sub vertice{ #TODO: vertices ???? and rosen my ($a,$diff )= @_; my $aa = zeroes($a->dim(0)+1, $a->dim(0)); for ($j = 0; $j <= ($a->dim(0)); $j++){ for ($i = 0; $i < $a->dim(0); $i++){ $aa($j, $i) .= $a($i) - $diff; } $aa($j, $j) .= $a($j) + $diff if ($j < $a->dim(0)); } $aa; } sub test{ my $a = shift; my $b = rosen($a); $b->sclr; } $vertice = transpose(vertice($x,0.5)); $tol = pdl(1e-16); $maxit = pdl(long, 1000); $x->mnsx($vertice,$maxit,$tol,($y = null), \&test); print "Minimum $y found at $x with a tolerance of $tol"; '); pp_def("ivset", HandleBad => 0, Pars => 'int [phys]type();int [io,phys]iv(n);[io,phys]v(p)', GenericTypes => [F,D], Code =>' types(F) %{ extern void ivset_(integer *alg, integer *iv, integer *liv, integer *lv, float *v); %} types(D) %{ extern void divset_(integer *alg, integer *iv, integer *liv, integer *lv, double *v); %} $TFD(ivset_,divset_)($P(type), $P(iv), &$PRIV(__n_size), &$PRIV(__p_size),$P(v)); ', Doc =>' =for ref Initialize input controls and tolerances passed to optimization routines. type: 1: Unconstrained or simply bounded regression. 2: Unconstrained or simply bounded general optimization. 3: Regression with general linear constraints. 4: General optimization with general linear constraints. Without bound: length of iv array >= 59. length of v array >= 77 + P*(P+17) / 2 for rmnf, 71 + P*(P+13) / 2 for rmng, 78 + P*(P+21) / 2 for rmnh. With bounds: length of iv array >= 59 + P for rmnfb and rmngb, 59 + 3 * P for rmnhb. length of V array >= 77 + P*(P+23) / 2 for rmnfb, 71 + P*(P+19) / 2 for rmngb, 78 + P*(P+27) / 2 for rmnhb. where P is the number of variables. $iv[20] => control Fortran output unit for printing (0 => no output). =for example # Size of problem:5 # Routine used: rmng $iv = zeroes(long, 59); $v = zeroes(116); ivset(2,$iv,$v); '); pp_def("rmnf", HandleBad => 0, Pars => '[phys]fx(); [io,phys]x(m);[io,phys]scale(m);int [io,phys]iv(n);[io,phys]v(p)', OtherPars => "SV* min_func" , GenericTypes => [F,D], Code =>' types(F) %{ extern void rmnf_(float *d, float *fx, integer *iv, integer *liv, integer *lv, integer *n, float *v, float*x); %} types(D) %{ extern void drmnf_(double *d, double *fx, integer *iv, integer *liv, integer *lv, integer *n, double *v, double*x); %} pdl4_function = $PRIV(min_func); do{ $TFD(rmnf_,drmnf_)( $P(scale), $P(fx), $P(iv), &$PRIV(__n_size), &$PRIV(__p_size), &$PRIV(__m_size), $P(v), $P(x)); types(F) %{ fpdl4_wrapper(1, $P(fx), $SIZE(m), $P(x), $SIZE(n), $P(iv), $SIZE(p), $P(v)); %} types(D) %{ dpdl4_wrapper(1, $P(fx), $SIZE(m), $P(x), $SIZE(n), $P(iv), $SIZE(p), $P(v)); %} }while($iv(n=>0) <= 2 ); ', Doc =>' =for ref Given a function f of p variables, the optimization routines attempt to find a p-vector x* that minimizes f(x). scale: Scale vector such that |$scale(i) * $x(i)| are all in comparable unit. fx: Objective function value f(x). x: Parameter vector. iv: Working and parameter array. v: Working and parameter array. min_func: parameter: PDL(fx), PDL(x) =for example $x = random(5); $fx = pdl(0); $v = zeroes(77 + 5 *(5+17) / 2); $iv = zeroes(long,59); ivset(2,$iv,$v); $scale = ones(5); sub min_func{ my ($fx, $x) = @_; $fx .= rosen($x); } rmnf($fx, $x, $scale, $iv, $v, \&min_func); '); pp_def("rmng", HandleBad => 0, Pars => '[phys]fx(); [io,phys]gx(m); [io,phys]x(m);[io,phys]scale(m);int [io,phys]iv(n);[io,phys]v(p)', OtherPars => "SV* min_func; SV* grad_func" , GenericTypes => [F,D], Code =>' types(F) %{ extern void rmng_(float *d, float *fx, float *g, integer *iv, integer *liv, integer *lv, integer *n, float *v, float*x); %} types(D) %{ extern void drmng_(double *d, double *fx, double *g, integer *iv, integer *liv, integer *lv, integer *n, double *v, double*x); %} do{ $TFD(rmng_,drmng_)( $P(scale), $P(fx), $P(gx), $P(iv), &$PRIV(__n_size), &$PRIV(__p_size), &$PRIV(__m_size), $P(v), $P(x)); if($iv(n=>0) == 1 ) { pdl4_function = $PRIV(min_func); types(F) %{ fpdl4_wrapper(1, $P(fx), $SIZE(m), $P(x), $SIZE(n), $P(iv), $SIZE(p), $P(v)); %} types(D) %{ dpdl4_wrapper(1, $P(fx), $SIZE(m), $P(x), $SIZE(n), $P(iv), $SIZE(p), $P(v)); %} } else if($iv(n=>0) == 2 ) { pdl4_function = $PRIV(grad_func); types(F) %{ fpdl4_wrapper($SIZE(m), $P(gx), $SIZE(m), $P(x), $SIZE(n), $P(iv), $SIZE(p), $P(v)); %} types(D) %{ dpdl4_wrapper($SIZE(m), $P(gx), $SIZE(m), $P(x), $SIZE(n), $P(iv), $SIZE(p), $P(v)); %} } }while($iv(n=>0) <= 2 ); ', Doc =>' =for ref Given a function f of p variables, the optimization routines attempt to find a p-vector x* that minimizes f(x) with user computed gradient. fx: Objective function value f(x). gx: Gradient vector g(x). x: Parameter vector. scale: Scale vector such that |$scale(i) * $x(i)| are all in comparable unit. iv: Working and parameter array. v: Working and parameter array. min_func: parameter: PDL(fx), PDL(x) grad_func: parameter PDL(gx), PDL(x) =for example $x = random(5); $fx = pdl(0); $v = zeroes(71 + 5 *(5+13) / 2); $iv = zeroes(long,59); ivset(2,$iv,$v); # Change initial step $v(34).= 0.9 $scale = ones(5); sub min_func{ my ($fx, $x) = @_; $fx .= rosen($x); } sub grad_func{ my ($gx, $x) = @_; $gx .= rosen_grad($x); } rmng($fx, $gx, $x, $scale, $iv, $v, \&min_func, \&grad_func); '); pp_def("rmnh", HandleBad => 0, Pars => '[phys]fx(); [io,phys]gx(m); [io,phys] hx(n);[io,phys]x(m);[io,phys]scale(m);int [io,phys]iv(p);[io,phys]v(q)', OtherPars => "SV* min_func; SV* grad_func; SV* hess_func" , GenericTypes => [F,D], Code =>' types(F) %{ extern void rmnh_(float *d, float *fx, float *g, float *h, integer *iv, integer *lh, integer *liv, integer *lv, integer *n, float *v, float*x); %} types(D) %{ extern void drmnh_(double *d, double *fx, double *g, double *h,integer *iv, integer *lh, integer *liv, integer *lv, integer *n, double *v, double*x); %} do{ $TFD(rmnh_,drmnh_)( $P(scale), $P(fx), $P(gx), $P(hx), $P(iv), &$PRIV(__n_size), &$PRIV(__p_size), &$PRIV(__q_size), &$PRIV(__m_size), $P(v), $P(x)); if($iv(p=>0) == 1 ) { pdl4_function = $PRIV(min_func); types(F) %{ fpdl4_wrapper(1, $P(fx), $SIZE(m), $P(x), $SIZE(p), $P(iv), $SIZE(q), $P(v)); %} types(D) %{ dpdl4_wrapper(1, $P(fx), $SIZE(m), $P(x), $SIZE(p), $P(iv), $SIZE(q), $P(v)); %} } else if($iv(p=>0) == 2 ) { pdl4_function = $PRIV(grad_func); types(F) %{ fpdl4_wrapper($SIZE(m), $P(gx), $SIZE(m), $P(x), $SIZE(p), $P(iv), $SIZE(q), $P(v)); %} types(D) %{ dpdl4_wrapper($SIZE(m), $P(gx), $SIZE(m), $P(x), $SIZE(p), $P(iv), $SIZE(q), $P(v)); %} pdl4_function = $PRIV(hess_func); types(F) %{ fpdl4_wrapper($SIZE(n), $P(hx), $SIZE(m), $P(x), $SIZE(p), $P(iv), $SIZE(q), $P(v)); %} types(D) %{ dpdl4_wrapper($SIZE(n), $P(hx), $SIZE(m), $P(x), $SIZE(p), $P(iv), $SIZE(q), $P(v)); %} } }while($iv(p=>0) <= 2 ); ', Doc =>' =for ref Given a function f of p variables, attempt to find a p-vector x* that minimizes f(x) with user computed hessian and gradient. fx: Objective function value f(x). gx: Gradient vector g(x). hx: Vector that contains lower triangle of the Hessian matrix H(x), stored rowwise. x: Parameter vector. scale: Scale vector such that |$scale(i) * $x(i)| are all in comparable unit. iv: Working and parameter array. v: Working and parameter array. min_func: parameter: PDL(fx), PDL(x) grad_func: parameter PDL(gx), PDL(x) hess_func: parameter PDL(hx), PDL(x) =for example $x = random(5); $fx = pdl(0); $hx = zeroes( 5 *(5+1)/2 ); $v = zeroes(78 + 5 *(5+21) / 2); $iv = zeroes(long,59); ivset(2,$iv,$v); $scale = ones(5); sub min_func{ my ($fx, $x) = @_; $fx .= rosen($x); } sub grad_func{ my ($gx, $x) = @_; $gx .= rosen_grad($x); } sub hess_func{ my ($hx, $x) = @_; rosen_hess($x,1)->squaretotri($hx); } rmnh($fx, $gx, $hx, $x, $scale, $iv, $v, \&min_func, \&grad_func, \&hess_func); '); pp_def("rmnfb", HandleBad => 0, Pars => '[io,phys]fx(); [io,phys]x(m);[phys]bound(2,m);[io,phys]scale(m);int [io,phys]iv(n);[io,phys]v(p)', OtherPars => "SV* min_func" , GenericTypes => [F,D], Code =>' types(F) %{ extern void rmnfb_(float *bound, float *d, float *fx, integer *iv, integer *liv, integer *lv, integer *n, float *v, float*x); %} types(D) %{ extern void drmnfb_(double *bound, double *d, double *fx, integer *iv, integer *liv, integer *lv, integer *n, double *v, double*x); %} pdl4_function = $PRIV(min_func); do{ $TFD(rmnfb_,drmnfb_)( $P(bound), $P(scale), $P(fx), $P(iv), &$PRIV(__n_size), &$PRIV(__p_size), &$PRIV(__m_size), $P(v), $P(x)); types(F) %{ fpdl4_wrapper(1, $P(fx), $SIZE(m), $P(x), $SIZE(n), $P(iv), $SIZE(p), $P(v)); %} types(D) %{ dpdl4_wrapper(1, $P(fx), $SIZE(m), $P(x), $SIZE(n), $P(iv), $SIZE(p), $P(v)); %} }while($iv(n=>0) <= 2 ); ', Doc =>' =for ref Given a function f of p variables, the optimization routines attempt to find a p-vector x* that minimizes f(x) with simple bounds. fx: Objective function value f(x). x: Parameter vector. bound: Lower and upper bound stored columnwise. scale: Scale vector such that |$scale(i) * $x(i)| are all in comparable unit. iv: Working and parameter array. v: Working and parameter array. min_func: parameter: PDL(fx), PDL(x) =for example $x = random(5); $fx = pdl(0); $bounds = zeroes(2,5); $bounds(0,).= 0; $bounds(1,).= 5; $v = zeroes(77 + 5 *(5+23)); $iv = zeroes(long,59+5); ivset(2,$iv,$v); $scale = ones(5); sub min_func{ my ($fx, $x) = @_; $fx .= rosen($x); } rmnfb($fx, $x, $bounds, $scale, $iv, $v, \&min_func); '); pp_def("rmngb", HandleBad => 0, Pars => '[io,phys]fx(); [io,phys]gx(m); [io,phys]x(m);[phys]bound(2,m);[io,phys]scale(m);int [io,phys]iv(n);[io,phys]v(p)', OtherPars => "SV* min_func; SV* grad_func" , GenericTypes => [F,D], Code =>' types(F) %{ extern void rmngb_(float *bound, float *d, float *fx, float *g, integer *iv, integer *liv, integer *lv, integer *n, float *v, float*x); %} types(D) %{ extern void drmngb_(double *bound, double *d, double *fx, double *g, integer *iv, integer *liv, integer *lv, integer *n, double *v, double*x); %} do{ $TFD(rmngb_,drmngb_)( $P(bound), $P(scale), $P(fx), $P(gx), $P(iv), &$PRIV(__n_size), &$PRIV(__p_size), &$PRIV(__m_size), $P(v), $P(x)); if($iv(n=>0) == 1 ) { pdl4_function = $PRIV(min_func); types(F) %{ fpdl4_wrapper(1, $P(fx), $SIZE(m), $P(x), $SIZE(n), $P(iv), $SIZE(p), $P(v)); %} types(D) %{ dpdl4_wrapper(1, $P(fx), $SIZE(m), $P(x), $SIZE(n), $P(iv), $SIZE(p), $P(v)); %} } else if($iv(n=>0) == 2 ) { pdl4_function = $PRIV(grad_func); types(F) %{ fpdl4_wrapper($SIZE(m), $P(gx), $SIZE(m), $P(x), $SIZE(n), $P(iv), $SIZE(p), $P(v)); %} types(D) %{ dpdl4_wrapper($SIZE(m), $P(gx), $SIZE(m), $P(x), $SIZE(n), $P(iv), $SIZE(p), $P(v)); %} } }while($iv(n=>0) <= 2 ); ', Doc =>' =for ref Given a function f of p variables, the optimization routines attempt to find a p-vector x* that minimizes f(x) with user computed gradient. fx: Objective function value f(x). gx: Gradient vector g(x). x: Parameter vector. bound: Lower and upper bound stored columnwise. scale: Scale vector such that |$scale(i) * $x(i)| are all in comparable unit. iv: Working and parameter array. v: Working and parameter array. min_func: parameter: PDL(fx), PDL(x) grad_func: parameter PDL(gx), PDL(x) =for example $x = random(5); $fx = pdl(0); $bounds = zeroes(2,5); $bounds(0,).= 0; $bounds(1,).= 5; $v = zeroes(71 + 5 *( 5 + 19 )/2); $iv = zeroes(long,59+5); ivset(2,$iv,$v); $scale = ones(5); sub min_func{ my ($fx, $x) = @_; $fx .= rosen($x); } sub grad_func{ my ($gx, $x) = @_; $gx .= rosen_grad($x); } rmngb($fx, $gx, $x, $bounds, $scale, $iv, $v, \&min_func, \&grad_func); '); pp_def("rmnhb", HandleBad => 0, Pars => '[io,phys]fx(); [io,phys]gx(m); [io,phys] hx(n);[io,phys]x(m);[phys]bound(2,m);[io,phys]scale(m);int [io,phys]iv(p);[io,phys]v(q)', OtherPars => "SV* min_func; SV* grad_func; SV* hess_func" , GenericTypes => [F,D], Code =>' types(F) %{ extern void rmnhb_(float *bound, float *d, float *fx, float *g, float *h, integer *iv, integer *lh, integer *liv,integer *lv, integer *n, float *v, float*x); %} types(D) %{ extern void drmnhb_(double *bound, double *d, double *fx, double *g, double *h,integer *iv, integer *lh, integer *liv, integer *lv, integer *n, double *v, double*x); %} do{ $TFD(rmnhb_,drmnhb_)( $P(bound), $P(scale), $P(fx), $P(gx), $P(hx), $P(iv), &$PRIV(__n_size), &$PRIV(__p_size), &$PRIV(__q_size), &$PRIV(__m_size), $P(v), $P(x)); if($iv(p=>0) == 1 ) { pdl4_function = $PRIV(min_func); types(F) %{ fpdl4_wrapper(1, $P(fx), $SIZE(m), $P(x), $SIZE(p), $P(iv), $SIZE(q), $P(v)); %} types(D) %{ dpdl4_wrapper(1, $P(fx), $SIZE(m), $P(x), $SIZE(p), $P(iv), $SIZE(q), $P(v)); %} } else if($iv(p=>0) == 2 ) { pdl4_function = $PRIV(grad_func); types(F) %{ fpdl4_wrapper($SIZE(m), $P(gx), $SIZE(m), $P(x), $SIZE(p), $P(iv), $SIZE(q), $P(v)); %} types(D) %{ dpdl4_wrapper($SIZE(m), $P(gx), $SIZE(m), $P(x), $SIZE(p), $P(iv), $SIZE(q), $P(v)); %} pdl4_function = $PRIV(hess_func); types(F) %{ fpdl4_wrapper($SIZE(n), $P(hx), $SIZE(m), $P(x), $SIZE(p), $P(iv), $SIZE(q), $P(v)); %} types(D) %{ dpdl4_wrapper($SIZE(n), $P(hx), $SIZE(m), $P(x), $SIZE(p), $P(iv), $SIZE(q), $P(v)); %} } }while($iv(p=>0) <= 2 ); ', Doc =>' =for ref Given a function f of p variables, attempt to find a p-vector x* that minimizes f(x) with user computed hessian and gradient. fx: Objective function value f(x). gx: Gradient vector g(x). hx: Vector that contains lower triangle of the Hessian matrix H(x), stored rowwise. x: Parameter vector. bound: Lower and upper bound stored columnwise. scale: Scale vector such that |$scale(i) * $x(i)| are all in comparable unit. iv: Working and parameter array. v: Working and parameter array. min_func: parameter: PDL(fx), PDL(x) grad_func: parameter PDL(gx), PDL(x) hess_func: parameter PDL(hx), PDL(x) =for example $x = random(5); $fx = pdl(0); $hx = zeroes( 5 *(5+1)/2 ); $bounds = zeroes(2,5); $bounds(0,).= 0; $bounds(1,).= 5; $v = zeroes(78 + 5 * (5+27)/2 ); $iv = zeroes(long, 59 + 3*5); ivset(2,$iv,$v); $scale = ones(5); sub min_func{ my ($fx, $x) = @_; $fx .= rosen($x); } sub grad_func{ my ($gx, $x) = @_; $gx .= rosen_grad($x); } sub hess_func{ my ($hx, $x) = @_; rosen_hess($x,1)->squaretotri($hx); } rmnhb($fx, $gx, $hx, $x, $bounds, $scale, $iv, $v, \&min_func, \&grad_func, \&hess_func); '); } pp_addhdr(' static SV *tensor_hess_function, *tensor_f_function, *tensor_grad_function; void tensor_f_wrapper(integer *n, double *x, double *f) { dSP ; int pret; PDL_Long odims[1]; PDL_Long dims[1]; PDL_Long mdims[] = {*n}; dims[0] = 1; PDL->setdims (pdl1, dims, 1); PDL->setdims (pdl2, mdims, 1); pdl1->datatype = PDL_D; pdl1->data = f; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl2->datatype = PDL_D; pdl2->data = x; pdl2->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl1); XPUSHs(sv_pdl2); PUTBACK ; pret = perl_call_sv(tensor_f_function, G_SCALAR); SPAGAIN; if (pret !=1) croak("Error calling perl function\n"); // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; PDL->setdims (pdl2, odims, 0); pdl2->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl2->data=NULL; PUTBACK ; FREETMPS ; LEAVE ; } void tensor_grad_wrapper(integer *n, double *x, double *g) { dSP ; int pret; PDL_Long odims[1]; PDL_Long mdims[] = {*n}; PDL->setdims (pdl1, mdims, 1); PDL->setdims (pdl2, mdims, 1); pdl1->datatype = PDL_D; pdl1->data = g; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl2->datatype = PDL_D; pdl2->data = x; pdl2->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl1); XPUSHs(sv_pdl2); PUTBACK ; pret = perl_call_sv(tensor_grad_function, G_SCALAR); SPAGAIN; if (pret !=1) croak("Error calling perl function\n"); // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; PDL->setdims (pdl2, odims, 0); pdl2->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl2->data=NULL; PUTBACK ; FREETMPS ; LEAVE ; } void tensor_hess_wrapper(integer *nr, integer *n, double *x, double *hx) { dSP ; int pret; PDL_Long odims[1]; PDL_Long hessdims[] = {*n,*nr}; PDL_Long mdims[] = {*n}; PDL->setdims (pdl1, hessdims, 2); PDL->setdims (pdl2, mdims, 1); pdl1->datatype = PDL_D; pdl1->data = hx; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl2->datatype = PDL_D; pdl2->data = x; pdl2->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl1); XPUSHs(sv_pdl2); PUTBACK ; pret = perl_call_sv(tensor_hess_function, G_SCALAR); SPAGAIN; if (pret !=1) croak("Error calling perl function\n"); // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; PDL->setdims (pdl2, odims, 0); pdl2->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl2->data=NULL; PUTBACK ; FREETMPS ; LEAVE ; } '); pp_def("tensoropt", HandleBad => 0, Pars => '[io,phys]fx();[io,phys]gx(n);[io,phys]hx(n,n);[io,phys]x(n);int [phys]method();int [io,phys]maxit();int [phys]digits();int [phys]gtype();int [phys] htype();[phys]fscale();[phys]typx(n);[phys]stepmx();[phys]xtol();[phys]gtol();int [phys]print();int [io,phys]ipr()', OtherPars => "SV* f_func;SV* g_func;SV* h_func" , GenericTypes => [D], Code =>' integer it, *iwork,i; double *work, *xtmp; extern int tensor_(integer *nr, integer *n, double *x, paramv fcn, paramv grd, paramv hsn, double *typx, double *fscale, double *gradtl, double *steptl, integer *itnlim, double *stepmx, integer *ipr, integer *method, integer *grdflg, integer *hesflg, integer *ndigit, integer *msg, double *xpls, double *fpls, double *gpls, double *h__, integer *itnno, double *wrk, integer *iwrk); tensor_f_function = $PRIV(f_func); tensor_grad_function = $PRIV(g_func); tensor_hess_function = $PRIV(h_func); iwork = (integer * ) malloc ( $PRIV(__n_size) * sizeof(integer)); work = (double * ) malloc ( ($PRIV(__n_size) * 8) * sizeof(double)); xtmp = (double * ) malloc ( $PRIV(__n_size) * sizeof(double)); tensor_( &$PRIV(__n_size), &$PRIV(__n_size), $P(x), tensor_f_wrapper, tensor_grad_wrapper, tensor_hess_wrapper, $P(typx), $P(fscale), $P(gtol), $P(xtol), $P(maxit), $P(stepmx), $P(ipr), $P(method), $P(gtype), $P(htype), $P(digits), $P(print), xtmp, $P(fx), $P(gx), $P(hx), &it, work, iwork); for (i = 0; i < $SIZE(n); i++) $x(n=>i) = xtmp[i]; $maxit()=it; free(work); free(iwork); free(xtmp); ', Doc =>' =for ref This routine solves the optimization problem minimize f(x) x where x is a vector of n real variables. The derivative tensor method method bases each iteration on a specially constructed fourth order model of the objective function. The model interpolates the function value and gradient from the previous iterate and the current function value, gradient and hessian matrix. parameters: fx --> function value and final function value gx(n) <-- current gradient and gradient at final point hx(n,n) --> hessian x(n) --> initial guess (input) and final point method --> if value is 0 then use only newton step at each iteration, if value is 1 then try both tensor and newton steps at each iteration maxit <-- iteration limit and final number of iterations digits --> number of good digits in optimization function fcn gtype --> = 0: gradient computed by finite difference 1: analytical gradient supplied is checked 2: analytical gradient supplied htype --> = 0: hessian computed by finite difference 1: analytical hessian supplied is checked 2: analytical hessian supplied fscale --> estimate of scale of objective function fcn typx(n) --> typical size of each component of x stepmx --> maximum step length allowed xtol --> step tolerance gtol --> gradient tolerance ipr --> output unit number print --> output message control f_func: parameter: PDL(fx), PDL(x) g_func: parameter PDL(gx), PDL(x) h_func: parameter PDL(hx), PDL(x) =for example $x = random(5); $gx = rosen_grad($x); $hx = rosen_hess($x); $fx = rosen($x); $xtol = pdl(1e-16); $gtol = pdl(1e-8); $stepmx =pdl(0.5); $maxit = pdl(long, 50); sub min_func{ my ($fx, $x) = @_; $fx .= rosen($x); } sub grad_func{ my ($gx, $x) = @_; $gx .= rosen_grad($x); } sub hess_func{ my ($hx, $x) = @_; $hx .= rosen_hess($x); } tensoropt($fx, $gx, $hx, $x, 1,$maxit,15,1,2,1, ones(5),0.5,$xtol,$gtol,2,6, \&min_func, \&grad_func, \&hess_func); '); pp_addhdr(' int lbfgs_wrapper(PDL_Long n, double *a, double *b, double *c, SV *lbfgs_func) { dSP ; int pret, ret; PDL_Long odims[1]; PDL_Long adims[] = {1}; PDL_Long bdims[] = {n}; PDL_Long cdims[] = {n}; PDL->setdims (pdl1, adims, 1); PDL->setdims (pdl2, bdims, 1); PDL->setdims (pdl3, cdims, 1); pdl1->datatype = PDL_D; pdl1->data = a; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl2->datatype = PDL_D; pdl2->data = b; pdl2->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl3->datatype = PDL_D; pdl3->data = c; pdl3->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl1); XPUSHs(sv_pdl2); XPUSHs(sv_pdl3); PUTBACK ; pret = perl_call_sv(lbfgs_func, G_SCALAR); SPAGAIN; if (pret !=1) croak("Error calling perl function\n"); ret = (int ) POPi ; // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; PDL->setdims (pdl2, odims, 0); pdl2->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl2->data=NULL; PDL->setdims (pdl3, odims, 0); pdl3->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl3->data=NULL; PUTBACK ; FREETMPS ; LEAVE ; return ret; } int lbfgs_diag_wrapper(PDL_Long n, double *a, double *b, SV *lbfgs_diag_func) { dSP ; int pret,ret ; PDL_Long odims[1]; PDL_Long adims[] = {n}; PDL_Long bdims[] = {n}; PDL->setdims (pdl1, adims, 1); PDL->setdims (pdl2, bdims, 1); pdl1->datatype = PDL_D; pdl1->data = a; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl2->datatype = PDL_D; pdl2->data = b; pdl2->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl1); XPUSHs(sv_pdl2); PUTBACK ; pret = perl_call_sv(lbfgs_diag_func, G_SCALAR); SPAGAIN; if (pret !=1) croak("Error calling perl function\n"); ret = (int ) POPi ; // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; PDL->setdims (pdl2, odims, 0); pdl2->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl2->data=NULL; PUTBACK ; FREETMPS ; LEAVE ; return ret; } '); pp_def("lbfgs", HandleBad => 0, Pars => '[io,phys]fx(); [io,phys]gx(n); [io,phys]x(n);[io,phys]diag(n);int [phys]diagco();int [phys]m();int [io,phys]maxit();int [io,phys]maxfc();[phys]eps();[phys]xtol();[phys]gtol();int [phys]print(2);int [io,phys]info()', OtherPars => "SV* fg_func;SV* diag_func" , GenericTypes => [D], Code =>' double *w; integer i,stop; extern int lbfgs_(integer *n, integer *m, double *x, double *f, double *g, logical *diagco, double *diag, integer *maxit,integer *iprint, double *eps, double *xtol, double *gtol,double *w, integer *iflag); w = (double * ) malloc ( ($PRIV(__n_size) * (2*$m() +1)+ 2*$m())* sizeof(double)); stop = 0; for (i = 1 ; i < $maxfc(); ) { lbfgs_( &$PRIV(__n_size), $P(m), $P(x), $P(fx), $P(gx), $P(diagco), $P(diag), $P(print), $P(maxit), $P(eps), $P(xtol), $P(gtol), w, $P(info) ); switch($info()) { case 1: stop = lbfgs_wrapper($PRIV(__n_size),$P(fx), $P(gx),$P(x), $PRIV(fg_func)); if (stop != 0) { $info() = -3; goto end; } i++; break; case 2: stop = lbfgs_diag_wrapper($PRIV(__n_size),$P(diag), $P(x), $PRIV(diag_func)); if (stop != 0) { $info() = -3; goto end; } break; default: goto end; } } end: $maxfc() = i; free(w); ', Doc =>' =for ref This subroutine solves the unconstrained minimization problem min f(x), x= (x1,x2,...,xn), using the limited memory bfgs method. The routine is especially effective on problems involving a large number of variables. In a typical iteration of this method an approximation hk to the inverse of the hessian is obtained by applying m bfgs updates to a diagonal matrix hk0, using information from the previous m steps. The user specifies the number m, which determines the amount of storage required by the routine. The user may also provide the diagonal matrices hk0 if not satisfied with the default choice. The algorithm is described in "on the limited memory bfgs method for large scale optimization", by d. liu and j. nocedal, mathematical programming b 45 (1989) 503-528. The steplength is determined at each iteration by means of the line search routine mcvsrch, which is a slight modification of the routine csrch written by moré and thuente. where m The number of corrections used in the bfgs update. it is not altered by the routine. values of m less than 3 are not recommended; large values of m will result in excessive computing time. 3<= m <=7 is recommended. restriction: m > 0. x On initial entry, it must be set by the user to the values of the initial estimate of the solution vector. On exit with info=0, it contains the values of the variables at the best point found (usually a solution). f is a double precision variable. before initial entry and on a re-entry with info=1, it must be set by the user to contain the value of the function f at the point x. g is a double precision array of length n. before initial entry and on a re-entry with info=1, it must be set by the user to contain the components of the gradient g at the point x. diagco is a logical variable that must be set to 1 if the user wishes to provide the diagonal matrix hk0 at each iteration. Otherwise it should be set to 0, in which case lbfgs will use a default value described below. diag is a double precision array of length n. if diagco=.true., then on initial entry or on re-entry with info=2, diag it must be set by the user to contain the values of the diagonal matrix hk0. Restriction: all elements of diag must be positive. print is an integer array of length two which must be set by the user. print(1) specifies the frequency of the output: print(1) < 0 : no output is generated, print(1) = 0 : output only at first and last iteration, print(1) > 0 : output every print(1) iterations. print(2) specifies the type of output generated: print(2) = 0 : iteration count, number of function evaluations, function value, norm of the gradient, and steplength, print(2) = 1 : same as print(2)=0, plus vector of variables and gradient vector at the initial point, print(2) = 2 : same as print(2)=1, plus vector of variables, print(2) = 3 : same as print(2)=2, plus gradient vector. maxit On entry maximum number of iteration. On exit, the number of iteration. maxfc On entry maximum number of function evaluation. On exit, the number of function evaluation. eps is a positive double precision variable that must be set by the user, and determines the accuracy with which the solution is to be found. the subroutine terminates when ||g|| < eps max(1,||x||), where ||.|| denotes the euclidean norm. xtol is a positive double precision variable that must be set by the user to an estimate of the machine precision (e.g. 10**(-16) on a sun station 3/60). The line search routine will terminate if the relative width of the interval of uncertainty is less than xtol. gtol is a double precision variable which controls the accuracy of the line search routine mcsrch. If the function and gradient evaluations are inexpensive with respect to the cost of the iteration (which is sometimes the case when solving very large problems) it may be advantageous to set gtol to a small value. A typical small value is 0.1. It\'s set to 0.9 if gtol < 1.d-04. restriction: gtol should be greater than 1.d-04. info is an integer variable that must be set to 0 on initial entry to the subroutine. A return with info < 0 or info > 2 indicates an error. The following values of info, detecting an error, are possible: info=-1 the i-th diagonal element of the diagonal inverse hessian approximation, given in diag, is not positive. info=-2 improper input parameters for lbfgs (n or m are not positive). info=-3 error in user subroutine. if info > 2 the line search routine mcsrch failed: info = 3 more than 20 function evaluations were required at the present iteration. info = 4 the step is too small. info = 5 the step is too large. info = 6 rounding errors prevent further progress. there may not be a step which satisfies the sufficient decrease and curvature conditions. tolerances may be too small. info = 7 relative width of the interval of uncertainty is at most xtol. info = 8 improper input parameters. fg_func: stop = fg_func PDL(fx), PDL(gx), PDL(x) =for example $x = random(5); $gx = rosen_grad($x); $fx = rosen($x); $diag = zeroes(5); $xtol = pdl(1e-16); $gtol = pdl(0.9); $eps = pdl(1e-10); $print = ones(2); $maxfc = pdl(long,100); $maxit = pdl(long,50); $info = pdl(long,0); $diagco= pdl(long,0); $m = pdl(long,10); sub fdiag{}; sub fg_func{ my ($f, $g, $x) = @_; $f .= rosen($x); $g .= rosen_grad($x); return 0; } lbfgs($fx, $gx, $x, $diag, $diagco, $m, $maxit, $maxfc, $eps, $xtol, $gtol, $print,$info,\&fg_func,\&fdiag); '); pp_addhdr(' int lbfgsb_wrapper(PDL_Long n , double *a, double *b, double *c, PDL_Long *d, double *e, SV *lbfgsb_func) { dSP ; int ret ; PDL_Long odims[1]; PDL_Long adims[] = {1}; PDL_Long bdims[] = {n}; PDL_Long cdims[] = {n}; PDL_Long ddims[] = {44}; PDL_Long edims[] = {29}; PDL->setdims (pdl1, adims, 1); PDL->setdims (pdl2, bdims, 1); PDL->setdims (pdl3, cdims, 1); PDL->setdims (pdl4, ddims, 1); PDL->setdims (pdl5, edims, 1); pdl1->datatype = PDL_D; pdl1->data = a; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl2->datatype = PDL_D; pdl2->data = b; pdl2->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl3->datatype = PDL_D; pdl3->data = c; pdl3->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl4->datatype = PDL_L; pdl4->data = d; pdl4->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl5->datatype = PDL_D; pdl5->data = e; pdl5->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl1); XPUSHs(sv_pdl2); XPUSHs(sv_pdl3); XPUSHs(sv_pdl4); XPUSHs(sv_pdl5); PUTBACK ; ret = perl_call_sv(lbfgsb_func, G_SCALAR); SPAGAIN; if (ret !=1) croak("Error calling perl function\n"); ret = (int ) POPi ; // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; PDL->setdims (pdl2, odims, 0); pdl2->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl2->data=NULL; PDL->setdims (pdl3, odims, 0); pdl3->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl3->data=NULL; PDL->setdims (pdl4, odims, 0); pdl4->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl4->data=NULL; PDL->setdims (pdl5, odims, 0); pdl5->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl5->data=NULL; PUTBACK ; FREETMPS ; LEAVE ; return ret; } '); pp_def("lbfgsb", HandleBad => 0, Pars => '[io,phys]fx(); [io,phys]gx(n); [io,phys]x(n);int [phys]m();[phys]bound(n,m=2);int [phys]tbound(n);int [io]maxit();[phys]factr();[phys]pgtol();[phys]gtol();int [phys]print(2);int [io,phys]info();int [o,phys]iv(p=44);[o,phys]v(q=29)', OtherPars => "SV* fg_func" , GenericTypes => [D], Code =>' int stop; char csave[60]; char task[60]; integer lsave[4]; double *wa; integer *iwa; integer i; extern void setulb_(integer *n, integer *m, double *x, double *l, double *u, integer *nbd, double *f, double *g, double *factr, double *pgtol, double *gtol, double *wa,integer *iwa, char *task, integer *iprint, char *csave, integer *lsave, integer *isave, double *dsave); strcpy(task, "START"); //TODO memset(task+5, \' \', sizeof(task)-5); iwa = (integer * ) malloc ( 3 * $PRIV(__n_size) * sizeof(integer)); wa = (double * ) malloc ((2*$m()*$PRIV(__n_size)+4*$PRIV(__n_size)+12*$m()*$m()+12*$m())* sizeof(double)); i = 0; while(1) { setulb_( &$PRIV(__n_size), $P(m), $P(x), &$bound(n=>0,m=>0), &$bound(n=>0,m=>1), $P(tbound), $P(fx), $P(gx), $P(factr), $P(pgtol), $P(gtol), wa, iwa, &task[0], $P(print), &csave[0], &lsave[0], $P(iv), $P(v) ); switch(task[0]) { case \'C\': /*CONV*/ goto end; case \'F\': /*FG*/ stop = lbfgsb_wrapper($SIZE(n), $P(fx), $P(gx), $P(x), $P(iv), $P(v), $PRIV(fg_func)); if (stop == -1) strcpy(task, "STOP CPU, REQUESTED BY USER."); break; case \'N\': /*NEW_X*/ if (stop == 1) strcpy(task, "STOP REQUESTED BY USER"); if( i >= ($maxit()-1) ) strcpy(task, "STOP: ITERATION LIMIT"); i++; break; case \'S\': /*STOP*/ goto end; case \'A\': /*ABNO*/ $info() = -1; goto end; default: /*ERROR*/ $info() = -2; goto end; } } end: $maxit() = i; free(iwa); free(wa); ', Doc =>' =for ref This routine solves the optimization problem minimize f(x) x subject to low <= x <= up It uses the limited memory BFGS method. (The direct method will be used in the subspace minimization.) x is a double precision array of dimension n. On entry x is an approximation to the solution. On exit x is the current approximation. m On entry m is the maximum number of variable metric corrections used to define the limited memory matrix. On exit m is unchanged. bound(n,2) On entry bound(,0) is the lower bound on x. On entry bound(,1) is the upper bound on x. On exit bound(n,2) is unchanged. tbound(n) On entry nbd represents the type of bounds imposed on the variables, and must be specified as follows: nbd(i)=0 if x(i) is unbounded, 1 if x(i) has only a lower bound, 2 if x(i) has both lower and upper bounds, and 3 if x(i) has only an upper bound. On exit nbd is unchanged. fx On first entry f is unspecified. On final exit f is the value of the function at x. gx(n) On first entry g is unspecified. On final exit g is the value of the gradient at x. maxit On entry maximum number of iteration. On exit, the number of iteration factr On entry factr >= 0 is specified by the user. The iteration will stop when (f^k - f^{k+1})/max{|f^k|,|f^{k+1}|,1} <= factr*epsmch where epsmch is the machine precision, which is automatically generated by the code. Typical values for factr: 1.d+12 for low accuracy; 1.d+7 for moderate accuracy; 1.d+1 for extremely high accuracy. pgtol On entry pgtol >= 0 is specified by the user. The iteration will stop when max{|proj g_i | i = 1, ..., n} <= pgtol where pg_i is the ith component of the projected gradient. gtol Controls the accuracy of the line search routine mcsrch. If the function and gradient evaluations are inexpensive with respect to the cost of the iteration (which is sometimes the case when solving very large problems) it may be advantageous to set gtol to a small value. A typical small value is 0.1. It\'s set to 0.9 if gtol < 1.d-04. Restriction: gtol should be greater than 1.d-04. print Controls the frequency and type of output generated: print[0] < 0 no output is generated; print[0] = 0 print only one line at the last iteration; 0 < print[0] < 99 print also f and |proj g| every iprint iterations; print[0] = 99 print details of every iteration except n-vectors; print[0] = 100 print also the changes of active set and final x; print[0] > 100 print details of every iteration including x and g; When print[1] > 0, the file iterate.dat will be created to summarize the iteration. info On entry 0, On exit, contain error code: 0 : no error -1: the routine has terminated abnormally without being able to satisfy the termination conditions, x contains the best approximation found, f and g contain f(x) and g(x) respectively -2: the routine has detected an error in the input parameters; iv(44) On exit, at end of an iteration, the following information is available: iv(21) = the total number of intervals explored in the search of Cauchy points; iv(25) = the total number of skipped BFGS updates before the current iteration; iv(29) = the number of current iteration; iv(30) = the total number of BFGS updates prior the current iteration; iv(32) = the number of intervals explored in the search of Cauchy point in the current iteration; iv(33) = the total number of function and gradient evaluations; iv(35) = the number of function value or gradient evaluations in the current iteration; if iv(36) = 0 then the subspace argmin is within the box; if iv(36) = 1 then the subspace argmin is beyond the box; iv(37) = the number of free variables in the current iteration; iv(38) = the number of active constraints in the current iteration; n + 1 - iv(39) = the number of variables leaving the set of active constraints in the current iteration; iv(40) = the number of variables entering the set of active constraints in the current iteration. else iv(29) = the current iteration number; iv(33) = the total number of function and gradient evaluations; iv(35) = the number of function value or gradient evaluations in the current iteration; iv(37) = the number of free variables in the current iteration; iv(38) = the number of active constraints at the current iteration v(29) On exit, at end of an iteration, the following information is available: v(0) = current \'theta\' in the BFGS matrix; v(1) = f(x) in the previous iteration; v(2) = factr*epsmch; v(3) = 2-norm of the line search direction vector; v(4) = the machine precision epsmch generated by the code; v(6) = the accumulated time spent on searching for Cauchy points; v(7) = the accumulated time spent on subspace minimization; v(8) = the accumulated time spent on line search; v(10) = the slope of the line search function at the current point of line search; v(11) = the maximum relative step length imposed in line search; v(12) = the infinity norm of the projected gradient; v(13) = the relative step length in the line search; v(14) = the slope of the line search function at the starting point of the line search; v(15) = the square of the 2-norm of the line search direction vector. scalar fg_func: computes the value(fx) and gradient(gx) of the function at x. iv and v are also provided for info param fx, gx, x, iv, v return value -1 stop now and restore the information at the latest iterate 0 continue 1 last iteration =for example # Global Optimization # Try to solve (with threading) # The SIAM 100-Digit Challenge problem 4 # see http://www-m8.ma.tum.de/m3/bornemann/challengebook/ # result: -3.30686864747523728007611377089851565716648236 use PDL::Opt::NonLinear; use PDL::Stat::Distributions; $x = (random(2,500)-0.5)*2; $gx = zeroes(2,500); $fx = zeroes(500); $bounds = zeroes(2,2); $bounds(,0).= -1; $bounds(,1).= 1; $tbounds = zeroes(2); $tbounds .= 2; $gtol = pdl(0.9); $pgtol = pdl(1e-4); $factr = pdl(10000); $m = pdl(10); $print = pdl([-1,0]); $maxit = zeroes(long,500); $maxit .= 200; $info = zeroes(long,500); $iv = zeroes(long,44,500); $v = zeroes(29,500); sub fg_func{ my ($f, $g, $x) = @_; $f.= exp(sin(50*$x(0)))+sin(60*exp($x(1)))+ sin(70*sin($x(0)))+sin(sin(80*$x(1)))- sin(10*($x(0)+$x(1)))+($x(0)**2+$x(1)**2)/4; $g(0) .= 50*cos(50*$x(0))* exp(sin(50*$x(0)))+ 70*cos(70*sin($x(0)))*cos($x(0))- 10*cos(10*$x(0)+10*$x(1))+1/2*$x(0); $g(1) .= 60*cos(60*exp($x(1)))* exp($x(1))+ 80*cos(sin(80*$x(1)))* cos(80*$x(1))- 10*cos(10*$x(0)+10*$x(1))+1/2*$x(1); return 0; } lbfgsb($fx, $gx, $x, $m, $bounds, $tbounds, $maxit, $factr, $pgtol, $gtol, $print, $info,$iv, $v,\&fg_func); print $fx->min; # Local Optimization $x = random(5); $gx = zeroes(5); $fx = pdl(0); $bounds = zeroes(5,2); $bounds(,0).= -5; $bounds(,1).= 5; $tbounds = zeroes(5); $tbounds .= 2; $gtol = pdl(0.9); $pgtol = pdl(1e-10); $factr = pdl(100); $print = pdl(long, [1,0]); $maxit = pdl(long,100); $info = pdl(long,0); $m = pdl(long,10); $iv = zeroes(long,44); $v = zeroes(29); sub fg_func{ my ($f, $g, $x) = @_; $f .= rosen($x); $g .= rosen_grad($x); return 0; } lbfgsb($fx, $gx, $x, $m, $bounds, $tbounds, $maxit, $factr, $pgtol, $gtol, $print, $info,$iv, $v,\&fg_func); '); pp_addhdr(' static SV *npg_pgrad_function, *npg_f_function, *npg_grad_function; void npg_f_wrapper(integer *n, double *x, double *f, integer *inform) { dSP ; int pret; integer ret; PDL_Long odims[1]; PDL_Long dims[1]; PDL_Long mdims[] = {*n}; dims[0] = 1; PDL->setdims (pdl1, dims, 1); PDL->setdims (pdl2, mdims, 1); pdl1->datatype = PDL_D; pdl1->data = f; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl2->datatype = PDL_D; pdl2->data = x; pdl2->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl1); XPUSHs(sv_pdl2); PUTBACK ; pret = perl_call_sv(npg_f_function, G_SCALAR); SPAGAIN; if (pret !=1) croak("Error calling perl function\n"); // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; PDL->setdims (pdl2, odims, 0); pdl2->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl2->data=NULL; ret = (integer ) POPi ; *inform = ret; PUTBACK ; FREETMPS ; LEAVE ; } void npg_pgrad_wrapper(integer *n, double *x, integer *inform) { dSP ; int pret; integer ret; PDL_Long odims[1]; PDL_Long dims[] = {*n}; PDL->setdims (pdl1, dims, 1); pdl1->datatype = PDL_D; pdl1->data = x; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl1); PUTBACK ; pret = perl_call_sv(npg_pgrad_function, G_SCALAR); SPAGAIN; if (pret !=1) croak("Error calling perl function\n"); // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; ret = (integer ) POPi ; *inform = ret; PUTBACK ; FREETMPS ; LEAVE ; } void npg_grad_wrapper(integer *n, double *x, double *g, integer *inform) { dSP ; int pret; integer ret; PDL_Long odims[1]; PDL_Long mdims[] = {*n}; PDL->setdims (pdl1, mdims, 1); PDL->setdims (pdl2, mdims, 1); pdl1->datatype = PDL_D; pdl1->data = g; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl2->datatype = PDL_D; pdl2->data = x; pdl2->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl1); XPUSHs(sv_pdl2); PUTBACK ; pret = perl_call_sv(npg_grad_function, G_SCALAR); SPAGAIN; if (pret !=1) croak("Error calling perl function\n"); // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; PDL->setdims (pdl2, odims, 0); pdl2->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl2->data=NULL; ret = (integer ) POPi ; *inform = ret; PUTBACK ; FREETMPS ; LEAVE ; } '); pp_def("spg", HandleBad => 0, Pars => '[io,phys]fx();[io,phys]x(n);int [io,phys]m();int [io,phys]maxit();int [phys]maxfc();[phys]eps1();[phys]eps2();int [phys]print();int [io,phys]fcnt();int [io,phys]gcnt();[io,phys]pginf();[io,phys]pgtwon();int [io,phys]info()', OtherPars => "SV* min_func; SV* grad_func; SV* px_func" , GenericTypes => [D], Code =>' extern void spg_(integer *n, double *x, integer *m, double *eps, double *eps2, integer *maxit, integer *maxfc, integer *output, double *f, double *pginfn, double *pgtwon, integer *iter, integer *fcnt, integer *gcnt, integer *flag, paramv *evalf, paramv *evalg, paramv *proj); integer iter; npg_f_function = $PRIV(min_func); npg_grad_function = $PRIV(grad_func); npg_pgrad_function = $PRIV(px_func); spg_( &$PRIV(__n_size), $P(x), $P(m), $P(eps1), $P(eps2), $P(maxit), $P(maxfc), $P(print), $P(fx), $P(pginf), $P(pgtwon), &iter, $P(fcnt), $P(gcnt), $P(info), npg_f_wrapper, npg_grad_wrapper, npg_pgrad_wrapper ); $maxit() = iter; ', Doc =>' =for ref This routine solves the optimization problem minimize f(x) x where x is a vector of n real variables. The method used is a Spectral Projected Gradient (Version 2: "continuous projected gradient direction") to find the local minimizers of a given function with convex constraints, described in E. G. Birgin, J. M. Martinez, and M. Raydan, "Nonmonotone spectral projected gradient methods on convex sets", SIAM Journal on Optimization 10, pp. 1196-1211, 2000. and E. G. Birgin, J. M. Martinez, and M. Raydan, "SPG: software for convex-constrained optimization", ACM Transactions on Mathematical Software, 2001 (to appear). The user must supply the external subroutines evalf, evalg and proj to evaluate the objective function and its gradient and to project an arbitrary point onto the feasible region. This version 17 JAN 2000 by E.G.Birgin, J.M.Martinez and M.Raydan. Reformatted 03 OCT 2000 by Tim Hopkins. Final revision 03 JUL 2001 by E.G.Birgin, J.M.Martinez and M.Raydan. On Entry: x(n) initial guess, m number of previous function values to be considered in the nonmonotone line search, eps1 stopping criterion: ||projected grad||_inf < eps, eps2 stopping criterion: ||projected grad||_2 < eps2, maxit integer, maximum number of iterations, maxfc integer, maximum number of function evaluations, print logical, true: print some information at each iteration, false: no print. On Return: x(n) approximation to the local minimizer, fx: function value at the approximation to the local minimizer, pginfn ||projected grad||_inf at the final iteration, pgtwon ||projected grad||_2^2 at the final iteration, maxit number of iterations, fcnt number of function evaluations, gcnt number of gradient evaluations, info termination parameter: 0= convergence with projected gradient infinite-norm, 1= convergence with projected gradient 2-norm, 2= too many iterations, 3= too many function evaluations, 4= error in proj subroutine, 5= error in evalf subroutine, 6= error in evalg subroutine. min_func: parameter: PDL(fx), PDL(x) grad_func: parameter: PDL(gx), PDL(x) px_func: parameter: PDL(x) =for example # Bounded example $bounds = zeroes(5,2); $bounds(,0) .= -5; $bounds(,1) .= 5; $info = pdl(long,0); $print = pdl(long,1); $fcnt = pdl(long,0); $gcnt = pdl(long,0); $pginf = pdl(0); $pgtwon = pdl(0); $maxit = pdl(long , 500); $maxfc = pdl(long , 1000); $m = pdl(long , 100); $eps1 = pdl(0); $eps2 = pdl(1e-5); $fx = pdl(0); $a= random(5) sub pgrad{ $x = shift; $c = minimum transpose(cat $x, $bounds(,1)); $c = maximum transpose(cat $c, $bounds(,0)); $x .=$c; return 0; } sub grad{ ($aa, $bb) = @_; $aa .= rosen_grad($bb); return 0; } sub min_func{ ($aa, $bb) = @_; $aa .= rosen($bb); return 0; } spg($fx, $a, $m, $maxit, $maxfc, $eps1, $eps2, $print, $fcnt, $gcnt, $pginf, $pgtwon, $info, \&min_func,\&grad, \&pgrad); '); pp_addhdr(' static SV *lm_function; void lm_wrapper(integer *n, double *x, double *f, double *g) { dSP ; int pret; PDL_Long odims[1]; PDL_Long mdims[] = {*n}; odims[0] = 1; PDL->setdims (pdl3, odims, 1); PDL->setdims (pdl1, mdims, 1); PDL->setdims (pdl2, mdims, 1); pdl1->datatype = PDL_D; pdl1->data = g; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl2->datatype = PDL_D; pdl2->data = x; pdl2->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl3->datatype = PDL_D; pdl3->data = f; pdl3->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl3); XPUSHs(sv_pdl1); XPUSHs(sv_pdl2); PUTBACK ; pret = perl_call_sv(lm_function, G_SCALAR); SPAGAIN; if (pret !=1) croak("Error calling perl function\n"); // For pdl_free odims[0] = 0; PDL->setdims (pdl3, odims, 0); pdl3->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl3->data=NULL; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; PDL->setdims (pdl2, odims, 0); pdl2->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl2->data=NULL; PUTBACK ; FREETMPS ; LEAVE ; } '); pp_def("lmqn", HandleBad => 0, Pars => '[io,phys]fx();[io,phys]gx(n);[io,phys]x(n);int [io,phys]maxit();int [io,phys]maxfc();int [phys]cgmaxit();[phys]xtol();[phys]accrcy();[phys]eta();[phys]stepmx();int [phys]print();int [io,phys]info()', OtherPars => "SV* fg_func" , GenericTypes => [D], Code =>' integer lw; double *w; extern void lmqn_(integer *ifail, integer *n, double *x, double *f, double *g, double *w, integer *lw, paramv *sfun, integer *msglvl, integer *maxit, integer *maxfun, integer *mxitgc, double *eta, double *stepmx, double *accrcy, double *xtol); lm_function = $PRIV(fg_func); lw = 14 * $PRIV(__n_size); w = (double *) malloc (lw * sizeof(double)); lmqn_( $P(info), &$PRIV(__n_size), $P(x), $P(fx), $P(gx), w, &lw, lm_wrapper, $P(print), $P(maxit), $P(maxfc), $P(cgmaxit), $P(eta), $P(stepmx), $P(accrcy), $P(xtol) ); free(w); ', Doc =>' =for ref This routine solves the optimization problem minimize f(x) x where x is a vector of n real variables. The method used is a truncated-newton algorithm (see "newton-type minimization via the lanczos method" by s.g. nash (siam j. numer. anal. 21 (1984), pp. 770-778). This algorithm finds a local minimum of f(x). It does not assume that the function f is convex (and so cannot guarantee a global solution), but does assume that the function is bounded below. It can solve problems having any number of variables, but it is especially useful when the number of variables (n) is large. subroutine parameters: fx On input, a rough estimate of the value of the objective function at the solution; on output, the value of the objective function at the solution gx(n) on output, the final value of the gradient x(n) on input, an initial estimate of the solution; on output, the computed solution. maxit maximum number of inner iterations maxfc maximum allowable number of function evaluations maxit maximum number of inner iterations per step cgmaxit maximum number of inner iterations per step (preconditionned conjugate iteration) eta severity of the linesearch xtol desired accuracy for the solution x* stepmx maximum allowable step in the linesearch accrcy accuracy of computed function values print determines quantity of printed output 0 = none, 1 = one line per major iteration. info ( 0 => normal return) ( 1 => more than maxit iterations) ( 2 => more than maxfun evaluations) ( 3 => line search failed to find ( lower point (may not be serious) (-1 => error in input parameters) fg_func: parameter: PDL(fx), PDL(gx), PDL(x) =for example $x = random(5); $gx = $x->zeroes; $fx = rosen($x); $accrcy = pdl(1e-16); $xtol = pdl(1e-10); $stepmx =pdl(1); $eta =pdl(0.9); $info = pdl(long, 0); $print = pdl(long, 1); $maxit = pdl(long, 50); $cgmaxit = pdl(long, 50); $maxfc = pdl(long,250); sub fg_func{ my ($f, $g, $x) = @_; $f .= rosen($x); $g .= rosen_grad($x); } lmqn($fx, $gx, $x, $maxit, $maxfc, $cgmaxit, $xtol, $accrcy, $eta, $stepmx, $print, $info,\&fg_func); '); pp_def("lmqnbc", HandleBad => 0, Pars => '[io,phys]fx();[io,phys]gx(n);[io,phys]x(n);[phys]bound(n,m=2);int [io,phys]maxit();int [io,phys]maxfc();int [phys]cgmaxit();[phys]xtol();[phys]accrcy();[phys]eta();[phys]stepmx();int [phys]print();int [io,phys]info()', OtherPars => "SV* fg_func" , GenericTypes => [D], Code =>' integer lw, *ipivot; double *w; extern void lmqnbc_(integer *ifail, integer *n, double *x, double *f, double *g, double *w, integer *lw, paramv *sfun, double *low,double *up, integer *ipivot, integer *msglvl, integer *maxit, integer *maxfun, integer *cgmaxit,double *eta, double *stepmx, double *accrcy, double *xtol); lm_function = $PRIV(fg_func); lw = 14 * $PRIV(__n_size); w = (double *) malloc (lw * sizeof(double)); ipivot = (integer *) malloc ($PRIV(__n_size) * sizeof(integer)); lmqnbc_( $P(info), &$PRIV(__n_size), $P(x), $P(fx), $P(gx), w, &lw, lm_wrapper, &$bound(n=>0,m=>0), &$bound(n=>0,m=>1), ipivot, $P(print), $P(maxit), $P(maxfc), $P(cgmaxit), $P(eta), $P(stepmx), $P(accrcy), $P(xtol) ); free(w); free(ipivot); ', Doc =>' =for ref This routine solves the optimization problem minimize f(x) x subject to low <= x <= up where x is a vector of n real variables. The method used is a truncated-newton algorithm (see "newton-type minimization via the lanczos algorithm" by s.g. nash (technical report 378, math. The lanczos method" by s.g. nash (siam j. numer. anal. 21 (1984), pp. 770-778). This algorithm finds a local minimum of f(x). It does not assume that the function f is convex (and so cannot guarantee a global solution), but does assume that the function is bounded below. It can solve problems having any number of variables, but it is especially useful when the number of variables (n) is large. subroutine parameters: fx On input, a rough estimate of the value of the objective function at the solution; on output, the value of the objective function at the solution gx(n) on output, the final value of the gradient x(n) on input, an initial estimate of the solution; on output, the computed solution. bound(n,2) The lower and upper bounds on the variables. if there are no bounds on a particular variable, set the bounds to -1.d38 and 1.d38, respectively. maxit maximum number of inner iterations maxfc maximum allowable number of function evaluations cgmaxit maximum number of inner iterations per step (preconditionned conjugate iteration) eta severity of the linesearch xtol desired accuracy for the solution x* stepmx maximum allowable step in the linesearch accrcy accuracy of computed function values print determines quantity of printed output 0 = none, 1 = one line per major iteration. info ( 0 => normal return) ( 1 => more than maxit iterations) ( 2 => more than maxfun evaluations) ( 3 => line search failed to find ( lower point (may not be serious) (-1 => error in input parameters) fg_func: parameter: PDL(fx), PDL(gx), PDL(x) =for example $x = random(5); $gx = $x->zeroes; $fx = rosen($x); $bounds = zeroes(5,2); $bounds(,0).= -5; $bounds(,1).= 5; $accrcy = pdl(1e-20); $xtol = pdl(1e-10); $stepmx =pdl(1); $eta = pdl(0.9); $info = pdl(long, 0); $print = pdl(long, 1); $maxit = pdl(long, 100); $maxfc = pdl(long,250); $cgmaxit = pdl(long, 50); sub fg_func{ my ($f, $g, $x) = @_; $f .= rosen($x); $g .= rosen_grad($x); } lmqnbc($fx, $gx, $x, $bounds, $maxit, $maxfc, $cgmaxit, $xtol, $accrcy, $eta, $stepmx, $print, $info,\&fg_func); '); pp_def("cgfam", HandleBad => 0, Pars => '[io,phys]fx(); [io,phys]gx(n); [io,phys]x(n);int [io,phys]maxit();[phys]eps();[io,phys]xtol();[io,phys]gtol();int [phys]print(2);int [io,phys]info(); int [phys]method()', OtherPars => "SV* fg_func" , GenericTypes => [D], Code =>' double *w, *gold, *d; int stop; integer i, irest, finish; int cgfam_(integer *n, double *x, double *f, double *g, double *d__, double *gold, integer *iprint, double *eps, double *xtol, double *gtol,double *w, integer *iflag, integer *irest, integer *method, logical *finish); w = (double * ) malloc ( $PRIV(__n_size) * sizeof(double)); gold = (double * ) malloc ( $PRIV(__n_size) * sizeof(double)); d = (double * ) malloc ( $PRIV(__n_size) * sizeof(double)); irest = 1; finish = 0; stop = 0; for (i = 1 ; i <= $maxit(); ) { cgfam_( &$PRIV(__n_size), $P(x), $P(fx), $P(gx), d, gold, $P(print), $P(eps), $P(xtol), $P(gtol), w, $P(info), &irest, $P(method), &finish ); switch($info()) { case 0: /*CONV*/ goto end; case 1: stop = lbfgs_wrapper($PRIV(__n_size),$P(fx), $P(gx),$P(x), $PRIV(fg_func)); break; case 2: if ( i == $maxit() || stop == 1) finish = 1; else i++; break; default: printf("Error in cgfam: %d\n", $info()); goto end; } } end: $maxit() = i; if (finish == 1) if (stop == 1 ) $info() = 1; else $info() = 2; free(w); free(d); free(gold); ', Doc =>' =for ref This subroutine solves the unconstrained minimization problem min f(x), x= (x1,x2,...,xn), using conjugate gradient methods, as described in the paper: gilbert, j.c. and nocedal, j. (1992). "global convergence properties of conjugate gradient methods", siam journal on optimization, vol. 2, pp. 21-42. where fx is a double precision variable. before initial entry and on a re-entry with info=1, it must be set by the user to contain the value of the function f at the point x. gx is a double precision array of length n. before initial entry and on a re-entry with info=1, it must be set by the user to contain the components of the gradient g at the point x. x on initial entry, it must be set by the user to the values of the initial estimate of the solution vector. on exit with info=0, it contains the values of the variables at the best point found (usually a solution). maxit maximum number of iterations. eps is a positive double precision variable that must be set by the user, and determines the accuracy with which the solution is to be found. the subroutine terminates when ||g|| < eps max(1,||x||), where ||.|| denotes the euclidean norm. xtol is a positive double precision variable that must be set by the user to an estimate of the machine precision (e.g. 10**(-16) on a sun station 3/60). the line search routine will terminate if the relative width of the interval of uncertainty is less than xtol. gtol is a double precision variable which controls the accuracy of the line search routine mcsrch. if the function and gradient evaluations are inexpensive with respect to the cost of the iteration (which is sometimes the case when solving very large problems) it may be advantageous to set gtol to a small value. A typical small value is 0.1. It\'s set to 0.9 if gtol < 1.d-04. restriction: gtol should be greater than 1.d-04. print frequency and type of printing iprint(1) < 0 : no output is generated iprint(1) = 0 : output only at first and last iteration iprint(1) > 0 : output every iprint(1) iterations iprint(2) : specifies the type of output generated; the larger the value (between 0 and 3), the more information iprint(2) = 0 : no additional information printed iprint(2) = 1 : initial x and gradient vectors printed iprint(2) = 2 : x vector printed every iteration iprint(2) = 3 : x vector and gradient vector printed every iteration info controls termination of code, and return to main program to evaluate function and gradient info = -3 : improper input parameters info = -2 : descent was not obtained info = -1 : line search failure info = 0 : initial entry or successful termination without error info = 1 : user canceled optimization (maximum iteration) info = 2 : user canceled optimization method = 1 : fletcher-reeves 2 : polak-ribiere 3 : positive polak-ribiere ( beta=max{beta,0} ) scalar fg_func: computes the value(fx) and gradient(gx) of the function at x. param fx, gx, x return value 0 continue 1 last iteration =for example $x = random(5); $gx = rosen_grad($x); $fx = rosen($x); $xtol = pdl(1e-10); $gtol = pdl(0.9); $eps = pdl(1e-10); $print = ones(2); $maxit = pdl(long, 200); $info = pdl(long,0); sub fg_func{ my ($f, $g, $x) = @_; $f .= rosen($x); $g .= rosen_grad($x); return 0; } cgfam($fx, $gx, $x, $maxit, $eps, $xtol, $gtol,$print,$info,1,\&fg_func); '); pp_addhdr(' static SV* hooke_function; double hooke_wrapper(int n, double *p) { dSP ; int pret; double ret; PDL_Long odims[1]; PDL_Long dims[] = {n}; PDL->setdims (pdl1, dims, 1); pdl1->datatype = PDL_D; pdl1->data = p; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl1); PUTBACK ; pret = perl_call_sv(hooke_function, G_SCALAR); SPAGAIN; if (pret !=1) croak("Error calling perl function\n"); // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; ret = (double ) POPn ; PUTBACK ; FREETMPS ; LEAVE ; return ret; } '); pp_def("hooke", HandleBad => 0, Pars => '[io,phys]x(n);int [io,phys]maxit();[phys]rho();[phys]tol()', OtherPars => "SV* hooke_func" , GenericTypes => [D], Code =>' extern int hooke(int nvars, paramd func, double *startpt, double *endpt, double rho, double tol, int maxit); hooke_function = $PRIV(hooke_func); $maxit() = hooke($SIZE(n), hooke_wrapper, $P(x), $P(x), $rho(), $tol(),$maxit()); ', Doc =>' =for ref Find a point X where the nonlinear function f(X) has a local minimum. X is an n-vector and f(X) is a scalar. In mathematical notation f: R^n -> R^1. The objective function f() is not required to be continuous. Nor does f() need to be differentiable. The program does not use or require derivatives of f(). The software user supplies three things: a subroutine that computes f(X), an initial "starting guess" of the minimum point X, and values for the algorithm convergence parameters. Then the program searches for a local minimum, beginning from the starting guess, using the Direct Search algorithm of Hooke and Jeeves. rho controls convergence : The algorithm works by taking "steps" from one estimate of a minimum, to another (hopefully better) estimate. Taking big steps gets to the minimum more quickly, at the risk of "stepping right over" an excellent point. The stepsize is controlled by a user supplied parameter called rho. At each iteration, the stepsize is multiplied by rho (0 < rho < 1), so the stepsize is successively reduced. Small values of rho correspond to big stepsize changes, which make the algorithm run more quickly. However, there is a chance (especially with highly nonlinear functions) that these big changes will accidentally overlook a promising search vector, leading to nonconvergence. Large values of rho correspond to small stepsize changes, which force the algorithm to carefully examine nearby points instead of optimistically forging ahead. This improves the probability of convergence. The stepsize is reduced until it is equal to (or smaller than) tol. So the number of iterations performed by Hooke-Jeeves is determined by rho and tol: rho**(number_of_iterations) = tol In general it is a good idea to set rho to an aggressively small value like 0.5 (hoping for fast convergence). Then, if the user suspects that the reported minimum is incorrect (or perhaps not accurate enough), the program can be run again with a larger value of rho such as 0.85, using the result of the first minimization as the starting guess to begin the second minimization. x: On entry this is the user-supplied guess at the minimum. On exit this is the location of the local minimum, calculated by the program maxit On entry, a rarely used, halting criterion. If the algorithm uses >= maxit iterations, halt. On exit number of iteration. rho This is a user-supplied convergence parameter (more detail above), which should be set to a value between 0.0 and 1.0. Larger values of rho give greater probability of convergence on highly nonlinear functions, at a cost of more function evaluations. Smaller values of rho reduces the number of evaluations (and the program running time), but increases the risk of nonconvergence. See below. tol This is the criterion for halting the search for a minimum. When the algorithm begins to make less and less progress on each iteration, it checks the halting criterion: if the stepsize is below tol, terminate the iteration and return the current best estimate of the minimum. Larger values of tol (such as 1.0e-4) give quicker running time, but a less accurate estimate of the minimum. Smaller values of tol (such as 1.0e-7) give longer running time, but a more accurate estimate of the minimum. func objective function to be minimized. scalar double fun ($x(n)) =for example $x = random(2); sub test{ my $a = shift; rosen($a)->sclr; } $rho = pdl(0.5); $tol = pdl(1e-7); $maxit =pdl(long, 500); $x->hooke($maxit, $rho,$tol,\&test); print "Minimum found at $x in $maxit iteration(s)"; '); pp_addhdr(' static SV *gencanf_function; void gencanf_wrapper(integer *n, double *x, double *f, integer *inform) { dSP ; int pret; PDL_Long odims[1]; PDL_Long mdims[] = {*n}; odims[0] = 1; PDL->setdims (pdl2, odims, 1); PDL->setdims (pdl1, mdims, 1); pdl1->datatype = PDL_D; pdl1->data = x; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl2->datatype = PDL_D; pdl2->data = f; pdl2->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl2); XPUSHs(sv_pdl1); PUTBACK ; pret = perl_call_sv(gencanf_function, G_SCALAR); SPAGAIN; if (pret !=1) croak("Error calling perl function\n"); *inform = (long ) POPl; // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; PDL->setdims (pdl2, odims, 0); pdl2->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl2->data=NULL; PUTBACK ; FREETMPS ; LEAVE ; } static SV *gencang_function; void gencang_wrapper(integer *n, double *x, double *g, integer *inform) { dSP ; int pret; PDL_Long odims[1]; PDL_Long mdims[] = {*n}; odims[0] = 1; PDL->setdims (pdl2, mdims, 1); PDL->setdims (pdl1, mdims, 1); pdl1->datatype = PDL_D; pdl1->data = x; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl2->datatype = PDL_D; pdl2->data = g; pdl2->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl2); XPUSHs(sv_pdl1); PUTBACK ; pret = perl_call_sv(gencang_function, G_SCALAR); SPAGAIN; if (pret !=1) croak("Error calling perl function\n"); *inform = (long ) POPl; // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; PDL->setdims (pdl2, odims, 0); pdl2->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl2->data=NULL; PUTBACK ; FREETMPS ; LEAVE ; } static SV *gencanh_function; void gencanh_wrapper(integer *nind, integer *ind, integer *n, double *x, double *d, double *hd,integer *inform) { dSP ; int pret; PDL_Long odims[1]; PDL_Long mdims[] = {*n}; PDL_Long ddims[] = {1,*n}; PDL_Long inddims[] = {*nind}; PDL->setdims (pdl1, mdims, 1); PDL->setdims (pdl2, ddims, 2); PDL->setdims (pdl3, ddims, 2); PDL->setdims (pdl4, inddims, 1); pdl1->datatype = PDL_D; pdl1->data = x; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl2->datatype = PDL_D; pdl2->data = d; pdl2->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl3->datatype = PDL_D; pdl3->data = hd; pdl3->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; pdl4->datatype = PDL_L; pdl4->data = ind; pdl4->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl3); XPUSHs(sv_pdl1); XPUSHs(sv_pdl2); XPUSHs(sv_pdl4); PUTBACK ; pret = perl_call_sv(gencanh_function, G_SCALAR); SPAGAIN; if (pret !=1) croak("Error calling perl function\n"); *inform = (long ) POPl; // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; PDL->setdims (pdl2, odims, 0); pdl2->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl2->data=NULL; PDL->setdims (pdl3, odims, 0); pdl3->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl3->data=NULL; PDL->setdims (pdl4, odims, 0); pdl4->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl4->data=NULL; PUTBACK ; FREETMPS ; LEAVE ; } '); pp_def("gencan", HandleBad => 0, Pars => '[io,phys]fx();[io,phys]gx(n);[io,phys]x(n);[phys]bound(n,m=2);[phys]fmin();int [phys]maxit();int [phys]maxfc(); int [phys]nearlyq();int [phys]gtype();int [phys]htvtype();int [phys]trtype();int [phys]fmaxit();int [phys]gmaxit(); int [phys]interpmaxit();int [phys]cgstop();int [phys]cgmaxit();int [phys]qmpmaxit(); [phys]ftol();[phys]epsgpen();[phys]epsgpsn();[phys]cggtol();[phys]cgitol();[phys]cgftol(); [phys]qmptol();[phys]delta();[phys]eta();[phys]delmin(); [phys]lammin();[phys]lammax();[phys]theta();[phys]gamma();[phys]beta(); [phys]sigma1();[phys]sigma2();[phys]nint();[phys]next(); [phys]sterel();[phys]steabs();[phys]epsrel();[phys]epsabs();[phys]infty(); [o,phys]gpeucn2();[o,phys]gpsupn();int [o,phys]iter();int [o,phys]fcnt();int [o,phys]gcnt();int [o,phys]cgcnt(); int [o,phys]spgiter();int [o,phys] spgfcnt();int [o,phys]tniter();int [o,phys]tnfcnt();int [o,phys]tnstpcnt(); int [o,phys]tnintcnt();int [o,phys] tnexgcnt();int [o,phys]tnexbcnt();int [o,phys]tnintfe();int [o,phys]tnexgfe();int [o,phys]tnexbfe(); int [phys]print(p);int [phys]ncomp();int [io,phys]info()', OtherPars => "SV* f_func; SV* g_func; SV* h_func", GenericTypes => [D], Code =>' extern void gencan_(integer *n, double *x, double *l, double *u, double *epsgpen, double *epsgpsn, double * ftol, integer *fmaxit, integer *gmaxit, double *fmin, integer *maxit, integer *maxfc, double *udelta0, integer * cgmaxit, integer *cgstop, double *cggtol, double *cgitol, double *cgftol, double *qmptol, integer *qmpmaxit, logical * nearlyq, integer *gtype, integer *htvtype, integer *trtype, integer * iprint, integer *iprint2, double *f, double *g, double * gpeucn2, double *gpsupn, integer *iter, integer *fcnt, integer * gcnt, integer *cgcnt, integer *spgiter, integer *spgfcnt, integer * tniter, integer *tnfcnt, integer *tnstpcnt, integer *tnintcnt, integer *tnexgcnt, integer *tnexbcnt, integer *tnintfe, integer * tnexgfe, integer *tnexbfe, integer *flag__, double *s, double *y, double *d__, integer *ind, double *w, double *eta, double *delmin, double *lammax, double *lammin, double *theta, double *gamma, double *beta, double * sigma1, double *sigma2, double *nint, double *next, integer *interpmaxit, integer *ncomp, double *sterel, double * steabs, double *epsrel, double *epsabs, double *infty, paramv evalf, paramv evalg, paramv evalhd); integer *ind; double *s, *y, *d__, *w; gencanf_function = $PRIV(f_func); gencang_function = $PRIV(g_func); gencanh_function = $PRIV(h_func); ind = (integer * ) malloc ( $PRIV(__n_size) * sizeof(integer)); s = (double * ) malloc ( $PRIV(__n_size) * sizeof(double)); y = (double * ) malloc ( $PRIV(__n_size) * sizeof(double)); d__ = (double * ) malloc ( $PRIV(__n_size) * sizeof(double)); w = (double * ) malloc (5 * $PRIV(__n_size) * sizeof(double)); gencan_(&$PRIV(__n_size), $P(x), &$bound(n=>0,m=>0), &$bound(n=>0,m=>1), $P(epsgpen), $P(epsgpsn), $P(ftol), $P(fmaxit), $P(gmaxit), $P(fmin), $P(maxit), $P(maxfc), $P(delta), $P(cgmaxit), $P(cgstop), $P(cggtol), $P(cgitol), $P(cgftol), $P(qmptol), $P(qmpmaxit), $P(nearlyq), $P(gtype), $P(htvtype), $P(trtype), &$print(p=>0), &$print(p=>1), $P(fx), $P(gx), $P(gpeucn2), $P(gpsupn), $P(iter), $P(fcnt), $P(gcnt), $P(cgcnt), $P(spgiter), $P(spgfcnt), $P(tniter), $P(tnfcnt), $P(tnstpcnt), $P(tnintcnt), $P(tnexgcnt), $P(tnexbcnt), $P(tnintfe), $P(tnexgfe), $P(tnexbfe), $P(info), s, y, d__, ind, w, $P(eta), $P(delmin), $P(lammax), $P(lammin), $P(theta), $P(gamma), $P(beta), $P(sigma1), $P(sigma2),$P(nint), $P(next), $P(interpmaxit), $P(ncomp), $P(sterel), $P(steabs), $P(epsrel), $P(epsabs), $P(infty), gencanf_wrapper, gencang_wrapper, gencanh_wrapper); free(s); free(y); free(d__); free(w); free(ind); ', Doc =>' =for ref Solves the box-constrained minimization problem Minimize f(x) subject to l \leq x \leq u using a method described in E. G. Birgin and J. M. Martinez, "Large-scale active-set box-constrained optimization method with spectral projected gradients", Computational Optimization and Applications 23, 101-125 (2002). Subroutines evalf and evalg must be supplied by the user to evaluate the function f and its gradient, respectively. The calling sequences are inform evalf(f, x) inform evalg(g, x) where x is the point where the function (the gradient) must be evaluated, n is the number of variables and f (g) is the functional value (the gradient vector). The real parameters x, f, g must be double precision. A subroutine evalhd to compute the Hessian times vector products is optional. If this subroutine is not provided an incremental quotients version will be used instead. The calling sequence of this subroutine should be inform call evalhd(hu, x, u, ind) where x is the point where the approx-Hessian is being considered, u is the vector which should be multiplied by the approx-Hessian H and hu is the vector where the product should be placed. The information about the matrix H must be passed to evalhd by means of common declarations. The necessary computations must be done in evalg. The real parameters x, u, hu must be double precision. This subroutine must be coded by the user, taking into account that n is the number of variables of the problem and that hu must be the product H u. Moreover, you must assume, when you code evalhd, that only size(ind) components of u are nonnull and that ind is the set of indices of those components. In other words, you must write evalhd in such a way that hu is the vector whose i-th entry is hu(i) = \Sum_{j=1}^{nind} H_{i,ind(j)} u_ind(j) Moreover, the only components of hu that you need to compute are those which corresponds to the indices ind(1),...,ind(nind). However, observe that you must assume that, in u, the whole vector is present, with its n components, even the zeroes. So, if you decide to code evalhd without taking into account the presence of ind and nind, you can do it. A final observation: probably, if nind is close to n, it is not worthwhile to use ind, due to the cost of accessing the correct indices. If you want, you can test, within your evalhd, if (say) nind > n/2, and, in this case use a straightforward scalar product for the components of hu. Example: Suppose that the matrix H is full. The main steps of evalhd could be: do i= 1, nind indi= ind(i) hu(indi)= 0.0d0 do j= 1, nind indj= ind(j) hu(indi)= hu(indi) + H(indi,indj) * u(indj) end do end do On Entry x double precision x(n) initial estimate to the solution bounds(n,2) lower bounds and upper bounds epsgpen double precision small positive number for declaring convergence when the euclidian norm of the projected gradient is less than or equal to epsgpen RECOMMENDED: epsgpen = 1.0d-5 epsgpsn double precision small positive number for declaring convergence when the infinite norm of the projected gradient is less than or equal to epsgpsn RECOMMENDED: epsgpsn = 1.0d-5 ftol double precision \'lack of enough progress\' measure. The algorithm stops by \'lack of enough progress\' when f(x_k) - f(x_{k+1}) <= ftol * max { f(x_j)-f(x_{j+1}, j 0, information is printed every print iterations. Exhaustive printing when print > 0 is commanded by print(1). RECOMMENDED: print(0) = 1 print(1) integer When print(0) > 0, detailed printing can be required setting print(1) = 1. RECOMMENDED: print(1) = 1 eta double precision constant for deciding abandon the current face or not We abandon the current face if the norm of the internal gradient (here, internal components of the continuous projected gradient) is smaller than (1-eta) times the norm of the continuous projected gradient. Using eta=0.9 is a rather conservative strategy in the sense that internal iterations are preferred over SPG iterations. RECOMMENDED: eta = 0.9 delmin double precision minimum \'trust region\' to compute the Truncated Newton direction RECOMMENDED: delmin = 0.1 lammin, lammax double precision The spectral steplength, called lambda, is projected inside the box [lammin,lammax] RECOMMENDED: lammin = 10^{-10} and lammax = 10^{10} theta double precision constant for the angle condition, i.e., at iteration k we need a direction d_k such that <= -theta ||g||_2 ||d_k||_2, where g_k is \nabla f(x_k) RECOMMENDED: theta = 10^{-6} gamma double precision constant for the Armijo crtierion f(x + alpha d) <= f(x) + gamma * alpha * <\nabla f(x),d> RECOMMENDED: gamma = 10^{-4} beta double precision constant for the beta condition .ge. beta * if (x_k + d_k) satisfies the Armijo condition but does not satisfy the beta condition then the point is accepted, but if it satisfied the Armijo condition and also satisfies the beta condition then we know that there is the possibility for a succesful extrapolation RECOMMENDED: beta = 0.5 sigma1, sigma2 double precision constant for the safeguarded interpolation if alpha_new \notin [sigma1, sigma*alpha] then we take alpha_new = alpha / nint RECOMMENDED: sigma1 = 0.1 and sigma2 = 0.9 nint double precision constant for the interpolation. See the description of sigma1 and sigma2 above. Sometimes we take as a new trial step the previous one divided by nint RECOMMENDED: nint = 2.0 next double precision constant for the extrapolation when extrapolating we try alpha_new = alpha * next RECOMMENDED: next = 2.0 interpmaxit integer constant for testing if, after having made at least interpmaxit interpolations, the steplength is too small. In that case failure of the line search is declared (may be the direction is not a descent direction due to an error in the gradient calculations) RECOMMENDED: interpmaxit = 4 (use interpmaxit > maxfc for inhibit this stopping criterion) ncomp integer this constant is just for printing. In a detailed printing option, ncomp component of the actual point will be printed RECOMMENDED: ncomp = 5 sterel, steabs double precision this constants mean a \'relative small number\' and \'an absolute small number\' for the increments in finite difference approximations of derivatives RECOMMENDED: epsrel = 10^{-7}, epsabs = 10^{-10} epsrel, epsabs, infty double precision this constants mean a \'relative small number\', \'an absolute small number\', and \'infinite or a very big number\'. Basically, a quantity A is considered negligeble with respect to another quantity B if |A| < max ( epsrel * |B|, epsabs ) RECOMMENDED: epsrel = 10^{-10}, epsabs = 10^{-20} and infty = 10^{+20} On Return x double precision x(n) final estimation to the solution f double precision function value at the final estimation g double precision g(n) gradient at the final estimation gpeucn2 double precision squared 2-norm of the continuous projected gradient g_p at the final estimation (||g_p||_2^2) gpsupn double precision ||g_p||_inf at the final estimation iter integer number of iterations fcnt integer number of function evaluations gcnt integer number of gradient evaluations cgcnt integer number of conjugate gradient iterations spgiter integer number of SPG iterations spgfcnt integer number of function evaluations in SPG-directions line searches tniter integer number of Truncated Newton iterations tnfcnt integer number of function evaluations in TN-directions line searches tnintcnt integer number of times a backtracking in a TN-direction was needed tnexgcnt integer number of times an extrapolation in a TN-direction was successfull in decreass the function value tnexbcnt integer number of times an extrapolation was aborted in the first extrapolated point by augment of the function value info This output parameter tells what happened in this subroutine, according to the following conventions: 0= convergence with small euclidian-norm of the projected gradient (smaller than epsgpen); 1= convergence with small infinite-norm of the projected gradient (smaller than epsgpsn); 2= the algorithm stopped by \'lack of enough progress\', that means that f(x_k) - f(x_{k+1}) <= ftol * max { f(x_j)-f(x_{j+1}, j maxfc for inhibit this criterion; 7= it was achieved the maximum allowed number of iterations (maxit); 8= it was achieved the maximum allowed number of function evaluations (maxfc); 9= error in evalf subroutine; 10= error in evalg subroutine; 11= error in evalhd subroutine. =for example $x = random(50); $gx = $x->zeroes; $fx = pdl(0); $print = pdl(long,[1,0]); $info = pdl(long,0); $bounds = zeroes(50,2); $bounds(,0).=-5; $bounds(,1).=5; sub f_func{ my ($fx, $x) = @_; $fx .= rosen($x); return 0; } sub g_func{ my ($gx, $x) = @_; $gx .= rosen_grad($x); return 0; } sub h_func{ my ($hx, $x, $d, $ind) = @_; $hx .= rosen_hess($x,1) x $d; return 0; } gencan($fx, $gx, $x, $bounds, -1e308, 200, 1000, 1, 0, 0, 0, 5, 10, 5, 1, -1, 5, 0, 1e-10, 1e-10, 1e-8, 0.1, 1e-8, 1e-8, -1, 0.9, 0.1, 1e+40, 1e-40, 1e-6, 0.0001, 0.5, 0.1,0.9, 2, 2, 1e-10, 1e-99, 1e-30, 1e-99, 1e+308, ($gpeucn2=null), ($gpsupn=null), ($iter=null), ($fcnt=null), ($gcnt=null), ($cgcnt=null), ($spgiter=null), ($spgfcnt=null), ($tniter=null), ($tnfcnt=null), ($tnstpcnt=null), ($tnintcnt=null), ($tnexgcnt=null), ($tnexbcnt=null), ($tnintfe=null), ($tnexgfe=null), ($tnexbfe=null), $print,5, $info,\&f_func,\&g_func, \&h_func); '); pp_def("sgencan", HandleBad => 0, Pars => '[io,phys]fx();[io,phys]gx(n);[io,phys]x(n);[phys]bound(n,m=2);int [io,phys]maxit();int [io,phys]maxfc(); int [phys]nearlyq();int [phys]gtype();int [phys]htvtype();int [phys]trtype();int [phys]fmaxit();int [phys]gmaxit(); int [phys]interpmaxit();int [phys]cgstop();int [phys]cgmaxit();int [phys]qmpmaxit(); [phys]ftol();[phys]epsgpen();[phys]epsgpsn();[phys]cggtol();[phys]cgitol();[phys]cgftol(); [phys]qmptol();[phys]delta();[phys]eta();[phys]delmin(); int [phys]print(p);int [io,phys]info()', OtherPars => "SV* f_func; SV* g_func; SV* h_func", GenericTypes => [D], Code =>' extern void gencan_(integer *n, double *x, double *l, double *u, double *epsgpen, double *epsgpsn, double * ftol, integer *fmaxit, integer *gmaxit, double *fmin, integer *maxit, integer *maxfc, double *udelta0, integer * cgmaxit, integer *cgstop, double *cggtol, double *cgitol, double *cgftol, double *qmptol, integer *qmpmaxit, logical * nearlyq, integer *gtype, integer *htvtype, integer *trtype, integer * iprint, integer *iprint2, double *f, double *g, double * gpeucn2, double *gpsupn, integer *iter, integer *fcnt, integer * gcnt, integer *cgcnt, integer *spgiter, integer *spgfcnt, integer * tniter, integer *tnfcnt, integer *tnstpcnt, integer *tnintcnt, integer *tnexgcnt, integer *tnexbcnt, integer *tnintfe, integer * tnexgfe, integer *tnexbfe, integer *flag__, double *s, double *y, double *d__, integer *ind, double *w, double *eta, double *delmin, double *lammax, double *lammin, double *theta, double *gamma, double *beta, double * sigma1, double *sigma2, double *nint, double *next, integer *interpmaxit, integer *ncomp, double *sterel, double * steabs, double *epsrel, double *epsabs, double *infty, paramv evalf, paramv evalg, paramv evalhd); integer iter, fcnt, gcnt, cgcnt, spgiter; integer spgfcnt, tniter, tnfcnt, tnstpcnt, tnintcnt, tnexgcnt, tnexbcnt, tnintfe, tnexgfe; integer tnexbfe, ncomp; integer *ind; double fmin; double gpeucn2, gpsupn, lammax, lammin, theta, gamma, beta; double sigma1, sigma2, nint, next, sterel, steabs, epsrel, epsabs, infty; double *s, *y, *d__, *w; gencanf_function = $PRIV(f_func); gencang_function = $PRIV(g_func); gencanh_function = $PRIV(h_func); ind = (integer * ) malloc ( $PRIV(__n_size) * sizeof(integer)); ncomp = 10; fmin = -1e+308; s = (double * ) malloc ( $PRIV(__n_size) * sizeof(double)); y = (double * ) malloc ( $PRIV(__n_size) * sizeof(double)); d__ = (double * ) malloc ( $PRIV(__n_size) * sizeof(double)); w = (double * ) malloc (5 * $PRIV(__n_size) * sizeof(double)); lammax = 1e+40; lammin = 1e-40; theta = 1e-6; gamma = 0.0001; beta = 0.5; sigma1 = 0.1; sigma2 = 0.9; nint = 2; next = 2; sterel = 1e-10; steabs = 1e-99; epsrel = 1e-30; epsabs= 1e-99; infty= 1e+308; gencan_(&$PRIV(__n_size), $P(x), &$bound(n=>0,m=>0), &$bound(n=>0,m=>1), $P(epsgpen), $P(epsgpsn), $P(ftol), $P(fmaxit), $P(gmaxit), &fmin, $P(maxit), $P(maxfc), $P(delta), $P(cgmaxit), $P(cgstop), $P(cggtol), $P(cgitol), $P(cgftol), $P(qmptol), $P(qmpmaxit), $P(nearlyq), $P(gtype), $P(htvtype), $P(trtype), &$print(p=>0), &$print(p=>1), $P(fx), $P(gx), &gpeucn2, &gpsupn, &iter, &fcnt, &gcnt, &cgcnt, &spgiter, &spgfcnt, &tniter, &tnfcnt, &tnstpcnt, &tnintcnt, &tnexgcnt, &tnexbcnt, &tnintfe, &tnexgfe, &tnexbfe, $P(info), s, y, d__, ind, w, $P(eta), $P(delmin), &lammax, &lammin, &theta, &gamma, &beta, &sigma1, &sigma2, &nint, &next, $P(interpmaxit), &ncomp, &sterel, &steabs, &epsrel, &epsabs, &infty, gencanf_wrapper, gencang_wrapper, gencanh_wrapper); free(s); free(y); free(d__); free(w); free(ind); $maxit() = iter; $maxfc() = fcnt; ', Doc =>' =for ref Solves the box-constrained minimization problem Minimize f(x) subject to l \leq x \leq u using a method described in E. G. Birgin and J. M. Martinez, "Large-scale active-set box-constrained optimization method with spectral projected gradients", Computational Optimization and Applications 23, 101-125 (2002). This is the simplified version of gencan. Subroutines evalf and evalg must be supplied by the user to evaluate the function f and its gradient, respectively. The calling sequences are inform evalf(f, x) inform evalg(g, x) where x is the point where the function (the gradient) must be evaluated, n is the number of variables and f (g) is the functional value (the gradient vector). The real parameters x, f, g must be double precision. A subroutine evalhd to compute the Hessian times vector products is optional. If this subroutine is not provided an incremental quotients version will be used instead. The calling sequence of this subroutine should be inform call evalhd(hu, x, u, ind) where x is the point where the approx-Hessian is being considered, u is the vector which should be multiplied by the approx-Hessian H and hu is the vector where the product should be placed. The information about the matrix H must be passed to evalhd by means of common declarations. The necessary computations must be done in evalg. The real parameters x, u, hu must be double precision. This subroutine must be coded by the user, taking into account that n is the number of variables of the problem and that hu must be the product H u. Moreover, you must assume, when you code evalhd, that only size(ind) components of u are nonnull and that ind is the set of indices of those components. In other words, you must write evalhd in such a way that hu is the vector whose i-th entry is hu(i) = \Sum_{j=1}^{nind} H_{i,ind(j)} u_ind(j) Moreover, the only components of hu that you need to compute are those which corresponds to the indices ind(1),...,ind(nind). However, observe that you must assume that, in u, the whole vector is present, with its n components, even the zeroes. So, if you decide to code evalhd without taking into account the presence of ind and nind, you can do it. A final observation: probably, if nind is close to n, it is not worthwhile to use ind, due to the cost of accessing the correct indices. If you want, you can test, within your evalhd, if (say) nind > n/2, and, in this case use a straightforward scalar product for the components of hu. Example: Suppose that the matrix H is full. The main steps of evalhd could be: do i= 1, nind indi= ind(i) hu(indi)= 0.0d0 do j= 1, nind indj= ind(j) hu(indi)= hu(indi) + H(indi,indj) * u(indj) end do end do On Entry x double precision x(n) initial estimate to the solution bounds(n,2) lower bounds and upper bounds epsgpen double precision small positive number for declaring convergence when the euclidian norm of the projected gradient is less than or equal to epsgpen RECOMMENDED: epsgpen = 1.0d-5 epsgpsn double precision small positive number for declaring convergence when the infinite norm of the projected gradient is less than or equal to epsgpsn RECOMMENDED: epsgpsn = 1.0d-5 ftol double precision \'lack of enough progress\' measure. The algorithm stops by \'lack of enough progress\' when f(x_k) - f(x_{k+1}) <= ftol * max { f(x_j)-f(x_{j+1}, j 0, information is printed every print iterations. Exhaustive printing when print > 0 is commanded by print(1). RECOMMENDED: print(0) = 1 print(1) integer When print(0) > 0, detailed printing can be required setting print(1) = 1. RECOMMENDED: print(1) = 1 eta double precision constant for deciding abandon the current face or not We abandon the current face if the norm of the internal gradient (here, internal components of the continuous projected gradient) is smaller than (1-eta) times the norm of the continuous projected gradient. Using eta=0.9 is a rather conservative strategy in the sense that internal iterations are preferred over SPG iterations. RECOMMENDED: eta = 0.9 delmin double precision minimum \'trust region\' to compute the Truncated Newton direction RECOMMENDED: delmin = 0.1 interpmaxit integer constant for testing if, after having made at least interpmaxit interpolations, the steplength is too small. In that case failure of the line search is declared (may be the direction is not a descent direction due to an error in the gradient calculations) RECOMMENDED: interpmaxit = 4 (use interpmaxit > maxfc for inhibit this stopping criterion) On Return x double precision x(n) final estimation to the solution f double precision function value at the final estimation g double precision g(n) gradient at the final estimation maxit number of iterations maxfc number of function evaluations info This output parameter tells what happened in this subroutine, according to the following conventions: 0= convergence with small euclidian-norm of the projected gradient (smaller than epsgpen); 1= convergence with small infinite-norm of the projected gradient (smaller than epsgpsn); 2= the algorithm stopped by \'lack of enough progress\', that means that f(x_k) - f(x_{k+1}) <= ftol * max { f(x_j)-f(x_{j+1}, j maxfc for inhibit this criterion; 7= it was achieved the maximum allowed number of iterations (maxit); 8= it was achieved the maximum allowed number of function evaluations (maxfc); 9= error in evalf subroutine; 10= error in evalg subroutine; 11= error in evalhd subroutine. =for example $x = random(5); $gx = $x->zeroes; $fx = pdl(0); $print = pdl(long,[1,0]); $maxit = pdl(long, 200); $maxfc = pdl(long, 1000); $info = pdl(long,0); $bounds = zeroes(5,2); $bounds(,0).=-5; $bounds(,1).=5; sub f_func{ my ($fx, $x) = @_; $fx .= rosen($x); return 0; } sub g_func{ my ($gx, $x) = @_; $gx .= rosen_grad($x); return 0; } sub h_func{ my ($hx, $x, $d, $ind) = @_; $hx .= rosen_hess($x,1) x $d; return 0; } sgencan($fx, $gx, $x, $bounds, $maxit, $maxfc, 1, 0, 0, 0, 5, 10, 5, 1, -1, 5, 0, 1e-8, 1e-10, 1e-5, 0.1, 1e-5, 1e-5, -1, 0.9, 0.1, $print,$info,\&f_func,\&g_func, \&h_func); '); pp_def("dhc", HandleBad => 0, Pars => '[io,phys]xrandom(n,m);step(); xtol(); int print();[o]fx();[o]x(n)', OtherPars => "SV* dhc_func" , GenericTypes => [D], Code =>' extern double dhc(int nvars, double *xrandom, double init, double tol, double *u, double *v, double *xv, double (*func)()); double *u, *v, *xv; double fx; PDL_Long i,j,k; hooke_function = $PRIV(dhc_func); u = (double *) malloc (sizeof(double) * $SIZE(n)); v = (double *) malloc (sizeof(double) * $SIZE(n)); xv = (double *) malloc (sizeof(double) * $SIZE(n)); $fx() = fx = DBL_MAX; for(i = 0; i < $SIZE(m); i++) { fx = dhc($SIZE(n), &$xrandom(n=>0,m=>i), $step(), $xtol(), u, v, xv, hooke_wrapper); if ($print()) { printf("\nAt starting location %d:\n",i+1); printf("Minimal point (first components):\n"); for(k = 0; k < $SIZE(n); k++) { printf("%5.5g ", $xrandom(n=>k,m=>i)); if (k > 4) break; } printf("\nFunctional value: %5.5g\n",fx); } if (fx < $fx()) { $fx() = fx; for (j = 0; j < $SIZE(n); j++) { $x(n=>j) = $xrandom(n=>j,m=>i); } } } free(u); free(v); free(xv); ', Doc =>' =for ref Find a point X where the function dhc_func(X) has a global minimum. X is an n-vector and f(X) is a scalar. In mathematical notation f: R^n -> R^1. using a method, dynamic hill climbing, described in D. Yuret, "From Genetic Algorithms To Efficient Optimization", A.I. Technical Report No. 1569 (1994). (http://home.ku.edu.tr/~dyuret/pub/aitr1569.html). where fx: On exit it contains the value of the function f at the point x. x: On exit this is the location of the global minimum, calculated by the program. xrandom: This is a user-supplied initial starting locations. On exit there are locations of the minimums calculated by the program. step: Initial step length. xtol: Step tolerance(minimum step size). print: if true print some information at each iteration (each minimum). dhc_func: Objective function to be minimized. If you need boundary conditions, put them in the objective function such that the optimizer gets bad values for points out of bounds. scalar double dhc_func($x()) =for example # Local Optimization $randomx = grandom(2); sub test{ my $a = shift; rosen($a)->sclr; } $step = pdl(1.0); $tol = pdl(1e-10); ($fx , $ret) = dhc($randomx, $step, $tol,0,\&test); print "Minimum found ($fx) at $ret"; # Try to solve # The SIAM 100-Digit Challenge problem 4 # see http://www-m8.ma.tum.de/m3/bornemann/challengebook/ # result: -3.30686864747523728007611377089851565716648236 $randomx = (random(2,100)-0.5)*2; sub test{ my $x = shift; my $f = exp(sin(50*$x(0)))+sin(60*exp($x(1)))+ sin(70*sin($x(0)))+sin(sin(80*$x(1)))- sin(10*($x(0)+$x(1)))+($x(0)**2+$x(1)**2)/4; $f->sclr; } $step = pdl(0.7); $tol = pdl(1e-8); ($fx , $ret) = dhc($randomx, $step, $tol,0,\&test); print "Minimum found ($fx) at $ret"; '); pp_def("de_opt", HandleBad => 0, Pars => '[io,phys]x(n);int genmax();int seed();int strategy(); int np();f();cr();inibound_l();inibound_u();int print();[o]fx();[o]cvar()', OtherPars => "SV* de_func" , GenericTypes => [D], Code =>' extern double de_optimize(int D, double *best, int genmax, int seed, int NP, int strategy, double F, double CR, double *cvar, double inibound_h, double inibound_l, int refresh, double (*evaluate)()); hooke_function = $PRIV(de_func); $fx() = de_optimize($SIZE(n), $P(x), $genmax(), $seed(), $np(), $strategy(), $f(), $cr(), $P(cvar), $inibound_l(), $inibound_u(), $print(), hooke_wrapper); ', Doc =>' =for ref Find a point X where the function de_func(X) has a global minimum. X is an n-vector and f(X) is a scalar. In mathematical notation f: R^n -> R^1. using a method described in Storn, R. and Price, K., "Differential Evolution - a Simple and Efficient Adaptive Scheme for Global Optimization over Continuous Spaces", Technical Report TR-95-012, ICSI, March 1995. (http://www.icsi.berkeley.edu/~storn/code.html) Strategy: 1: "DE/best/1/exp", 2: "DE/rand/1/exp", 3: "DE/rand-to-best/1/exp", 4: "DE/best/2/exp", 5: "DE/rand/2/exp", 6: "DE/best/1/bin", 7: "DE/rand/1/bin", 8: "DE/rand-to-best/1/bin", 9: "DE/best/2/bin", 10: "DE/rand/2/bin" Choice of strategy We have tried to come up with a sensible naming-convention: DE/x/y/z DE : stands for Differential Evolution x : a string which denotes the vector to be perturbed y : number of difference vectors taken for perturbation of x z : crossover method (exp = exponential, bin = binomial) There are some simple rules which are worth following: F is usually between 0.5 and 1 (in rare cases > 1 CR is between 0 and 1 with 0., 0.3, 0.7 and 1. being worth to be tried first To start off NP = 10*D is a reasonable choice. Increase NP if misconvergence happens. If you increase NP, F usually has to be decreased When the DE/best... schemes fail DE/rand... usually works and vice versa where fx: On exit it contains the value of the function f at the point x. x: On exit this is the location of the global minimum, calculated by the program. cvar: On exit it contains the value variance of the function f. strategy: Choice of strategy. seed: Random seed. genmax: Maximum number of generations. np: Population size. cr: Crossing over factor. f: Weight factor. inibound_l: Lower parameter bound for init. inibound_u: Upper parameter bound for init. print: if > 1 print some information at each \'print\' generation (minimum = 1). de_func: Objective function to be minimized. If you need boundary conditions, put them in the objective function such that the optimizer gets bad values for points out of bounds. scalar double de_func($x()) =for example # Try to solve # The SIAM 100-Digit Challenge problem 4 # see http://www-m8.ma.tum.de/m3/bornemann/challengebook/ # result: -3.30686864747523728007611377089851565716648236 use PDL::Opt::NonLinear; $x = zeroes(2); $strategy = pdl(long,7); $np = pdl(long,50); $print = pdl(long,50); $inibound_l = pdl(-1.0); $inibound_h = pdl(1.0); $genmax = pdl(long,250); $seed = pdl(long,3); $f = pdl(0.9); $cr = pdl(0.9); sub test{ my $x = shift; my ($x0, $y1); $x0 = PDL::Core::sclr_c($x(0)); $y1 = PDL::Core::sclr_c($x(1)); my $f = exp(sin(50*$x0))+sin(60*exp($y1))+ sin(70*sin($x0))+sin(sin(80*$y1))- sin(10*($x0+$y1))+($x0**2+$y1**2)/4; $f; } ($fx,$cvar)=de_opt($x, $genmax, $seed, $strategy, $np, $f, $cr, $inibound_l, $inibound_h, $print, \&test); print "Minimum found ($fx) at $x with variance $cvar\n"; '); pp_addhdr(' static SV* asa_function; double asa_wrapper (double *x, double *parameter_lower_bound, double *parameter_upper_bound, double *cost_tangents, double *cost_curvature, long int * parameter_dimension, int *parameter_int_real, int *cost_flag, int *exit_code, USER_DEFINES * USER_OPTIONS) { dSP ; int pret; double ret; PDL_Long odims[1]; PDL_Long dims[] = {*parameter_dimension}; PDL->setdims (pdl1, dims, 1); pdl1->datatype = PDL_D; pdl1->data = x; pdl1->state |= PDL_DONTTOUCHDATA | PDL_ALLOCATED; ENTER ; SAVETMPS ; PUSHMARK(sp) ; XPUSHs(sv_pdl1); PUTBACK ; pret = perl_call_sv(asa_function, G_SCALAR); SPAGAIN; if (pret !=1) croak("Error calling perl function\n"); // For pdl_free odims[0] = 0; PDL->setdims (pdl1, odims, 0); pdl1->state &= ~ (PDL_ALLOCATED |PDL_DONTTOUCHDATA); pdl1->data=NULL; ret = (double ) POPn ; PUTBACK ; FREETMPS ; LEAVE ; return ret; } '); #TODO : FUNC EXIT/GRADIENT/HESSIAN/ tangent(s) pp_def("asa_opt", HandleBad => 0, Pars => '[io,phys]x(n);int seed();inibound_l(n);inibound_u(n); int parameter_type(n); int limit(5); cost_param(4); temperature(3); int generic(10);resolution(n);coarse_resolution(n); quench_cost(); quench_param(n);int print();[o]fx();[o]tangents(n);[o]curvature(n,n);int [o]info()', OtherPars => "SV* asa_func" , GenericTypes => [D], Code =>' extern int asa_main (long int n, double *x,double *fx, double *upper, double *lower, int *parameter_type, long int seed, long int *limit, double *cost_param, double *temp, long int *generic,double *res, double *coarse, double *tangent, double *curvature, double *quench_cost, double *quench_scale, long int print, double (*func)()); asa_function = $PRIV(asa_func); $info() = asa_main($SIZE(n), $P(x), $P(fx), $P(inibound_l), $P(inibound_u), $P(parameter_type),$seed(), $P(limit), $P(cost_param), $P(temperature), $P(generic), $P(resolution), $P(coarse_resolution), $P(tangents), $P(curvature),$P(quench_cost), $P(quench_param), $print(),asa_wrapper); ', Doc =>' =for ref This routine solves the optimization problem minimize f(x) x subject to low <= x <= up It uses the Adaptive Simulated Annealing (ASA) method. (see http://www.ingber.com/#ASA-CODE) where x is a double precision array of dimension n. On entry x is an approximation to the solution. On exit x is the current approximation. seed random seed. inibound_l lower bound on x. inibound_u upper bound on x. parameter_type type of value of x -2 => real value, no reanneal -1 => real value 1 => integral value 2 => integral value, no reanneal limit limit(0) = Maximum_Cost_Repeat limit(1) = Number_Cost_Samples limit(2) = Limit_Acceptances limit(3) = Limit_Generated limit(4) = Limit_Invalid_Generated_States cost_param cost_param(0) = Accepted_To_Generated_Ratio cost_param(1) = Cost_Precision cost_parma(2) = Cost_Parameter_Scale_Ratio cost_parma(3) = Delta_X temperature temperature(0) = Initial_Parameter_Temperature temperature(1) = Temperature_Ratio_Scale temperature(2) = Temperature_Anneal_Scale generic generic(0) = Include_Integer_Parameters generic(1) = User_Initial_Parameters generic(2) = Sequential_Parameters generic(3) = Acceptance_Frequency_Modulus generic(4) = Generated_Frequency_Modulus generic(5) = Reanneal_Cost generic(6) = Reanneal_Parameters generic(7) = Queue_Size generic(8) = User_Tangents (not implemented) generic(9) = Curvature_0 resolution On entry, array of resolutions used to compare the currently generated parameters to those in the queue. coarse_resolution On entry, array of resolutions used to resolve the values of generated parameters. quench_cost used to adaptively set the scale of the temperature schedule. quench_param used to adaptively set the scale of the temperature schedule. print print = 0 no output is generated fx On final exit f is the value of the function at x. tangents On exit, it is the value of the tangents (gradient) at x. curvature On exit, it is the value of the curvature (hessian) at x. info On entry 0, On exit, contain error code: NORMAL_EXIT => 0 P_TEMP_TOO_SMALL => 1 C_TEMP_TOO_SMALL => 2 COST_REPEATING => 3 TOO_MANY_INVALID_STATES => 4 IMMEDIATE_EXIT => 5 INVALID_USER_INPUT => 7 INVALID_COST_FUNCTION => 8 INVALID_COST_FUNCTION_DERIV => 9 CALLOC_FAILED => -1 =for example # Try to solve # The SIAM 100-Digit Challenge problem 4 # see http://www-m8.ma.tum.de/m3/bornemann/challengebook/ # result: -3.30686864747523728007611377089851565716648236 use PDL::Opt::NonLinear; sub test{ my $x = shift; my ($x0, $y1); $x0 = PDL::Core::sclr_c($x(0)); $y1 = PDL::Core::sclr_c($x(1)); my $f = exp(sin(50*$x0))+sin(60*exp($y1))+ sin(70*sin($x0))+sin(sin(80*$y1))- sin(10*($x0+$y1))+($x0**2+$y1**2)/4; $f; } $bu = zeroes(2); $bl = zeroes(2); $bu .= 1; $bl .= -1; $seed = pdl(696969); $parameter = zeroes(long,2); $parameter .= -1; $qp = ones(2); $qc = pdl(1.0); $print = pdl(long,0); $seed = pdl(long, 696969); $limit = pdl(long,[5,10,1000,99999,1000]); $cost_param = pdl [1.e-4,1.e-18,1.0,0.001]; # $temp = pdl [1.0,1.e-5,100.0]; for generic problem $temp = pdl [1.0,1.e-5,10000.0]; $generic = pdl(long,[0,0,-1,100,10000,1,1,50,0,0]); $res = zeroes(2); $coarse = zeroes(2); $x = (random(2)-0.5)*2; asa_opt($x, ++$seed, $bl, $bu, $parameter, $limit, $cost_param, $temp, $generic, $res, $coarse, $qc, $qp, $print, \&test); # Local optimize now $rho = pdl(0.2); $tol = pdl(1e-10); $maxit =pdl(long, 500); $x->hooke($maxit, $rho,$tol,\&test); print "Minimum found ".test($x)." at $x in $maxit iteration(s)"; '); pp_add_exported('', 'rosen rosen_grad rosen_hess optimize'); pp_addpm({At=>'Bot'},<<'EOD'); sub rosen{ my $a = shift; sumover( 100 * ($a(1:) - $a(:-2)->power(2,0))**2 + (1-$a(:-2))**2); } sub optimize{ my ($x, %opt) = @_; my ($function, %ret); $function = $opt{function} ? $opt{function} : 'lbfgs'; $ret{fx} = pdl($x->type, 0); #TODO error, print if (substr($function,0,5) eq 'lbfgs' || substr($function,0,4) eq 'lmqn' || $function eq 'cgfam'){ barf "optimize: no evaluation function\n" if ( (!defined $opt{fg_func}) && (!defined $opt{f_func}) && (!defined $opt{g_func})); if (!defined $opt{fg_func}){ barf "optimize: no gradient evaluation function\n" unless defined $opt{g_func}; barf "optimize: no evaluation function\n" unless defined $opt{f_func}; $opt{fg_func} = sub { my ($fx, $gx, $x) = @_; $opt{f_func}($fx, $x); $opt{g_func}($gx, $x); }; } if ($function eq 'lbfgs'){ my ($diagco, $diag); $ret{gx} = $x->zeroes; $diag = $x->zeroes; $opt{eps} = pdl(1e-16) unless defined $opt{eps}; $opt{eta} = pdl(0.9) unless defined $opt{eta}; $opt{gtol} = pdl(1e-10) unless defined $opt{gtol}; $opt{'print'} = pdl(long,[-1,0])unless defined $opt{'print'}; if ( ! ref $opt{'print'}){ if ($opt{'print'} == -1){ $opt{'print'} = pdl(long,[-1,0]); } elsif ($opt{'print'} == 0){ $opt{'print'} = pdl(long,[$opt{'print'},0]); } else{ $opt{'print'} = pdl(long,[$opt{'print'},0]); } } $ret{fcnt} = defined $opt{maxfc} ? pdl ($opt{maxfc}) : pdl(long , 100); $ret{iter} = defined $opt{maxit} ? pdl ($opt{maxit}) : pdl(long , 50); $ret{info} = pdl(long,0); $opt{'m'} = pdl(long , 10) unless defined $opt{'m'}; if(defined $opt{d_func}){ $opt{d_func}($diag, $x); $diagco= pdl(long,1); } else{ $opt{d_func} = sub{}; $diagco= pdl(long,0); } $opt{fg_func}($ret{fx}, $ret{gx}, $x); lbfgs($ret{fx}, $ret{gx}, $x, $diag, $diagco, $opt{'m'}, $ret{iter}, $ret{fcnt}, $opt{gtol}, $opt{eps}, $opt{eta}, $opt{'print'},$ret{info},$opt{fg_func},$opt{d_func}); } elsif($function eq 'lbfgsb'){ my ($iv, $v); $ret{gx} = $x->zeroes; #TODO: extract iv and v if (defined $opt{bound}){ barf "optimize: no bound type\n" unless defined $opt{tbound}; } else{ $opt{tbound} = zeroes(long, $x->dim(0)); $opt{bound} = zeroes($x->type, $x->dim(0),2); } $opt{eta} = pdl(0.9) unless defined $opt{eta}; $opt{gtol} = pdl(1e-10) unless defined $opt{gtol}; $opt{factr} = pdl(100) unless defined $opt{factr}; $opt{'print'} = pdl(long,[-1,0])unless defined $opt{'print'}; if ( ! ref $opt{'print'}){ if ($opt{'print'} == -1){ $opt{'print'} = pdl(long,[-1,0]); } elsif ($opt{'print'} == 0){ $opt{'print'} = pdl(long,[$opt{'print'},0]); } else{ $opt{'print'} = pdl(long,[$opt{'print'},0]); } } $ret{iter} = defined $opt{maxit} ? pdl ($opt{maxit}) : pdl(long , 50); $ret{info} = pdl(long,0); $opt{'m'} = pdl(long , 10) unless defined $opt{'m'}; $iv = zeroes(long,44); $v = zeroes(29); lbfgsb($ret{fx}, $ret{gx}, $x, $opt{'m'}, $opt{bound}, $opt{tbound}, $ret{iter}, $opt{factr}, $opt{gtol}, $opt{eta}, $opt{'print'}, $ret{info},$iv, $v,$opt{fg_func}); $ret{fcnt} = $iv(33); } elsif (substr($function,0,4) eq 'lmqn'){ $ret{gx} = $x->zeroes; #BUG => param maxfc && cg $opt{accrcy} = pdl(1e-16) unless defined $opt{accrcy}; $opt{eps} = pdl(1e-10) unless defined $opt{eps}; $opt{stepmx} = pdl(1) unless defined $opt{stepmx}; $opt{eta} = pdl(0.25) unless defined $opt{eta}; $ret{info} = pdl(long,0); $opt{'print'} = pdl(long,0)unless defined $opt{'print'}; if ( (! ref $opt{'print'}) && defined($opt{'print'})){ if ($opt{'print'} == -1){ $opt{'print'} = pdl(long,0); } elsif ($opt{'print'} == 0){ $opt{'print'} = pdl(long,1); } else{ $opt{'print'} = pdl($opt{'print'}); } } $ret{fcnt} = defined $opt{maxfc} ? pdl ($opt{maxfc}) : pdl(long , 200); $ret{iter} = defined $opt{maxit} ? pdl ($opt{maxit}) : pdl(long , 100); $opt{cgmaxit} = pdl(long, 50) unless defined $opt{cgmaxit}; $opt{fg_func}($ret{fx}, $ret{gx}, $x); $opt{fg_func}($ret{fx}, $ret{gx}, $x); defined $opt{bound} ? lmqnbc($ret{fx}, $ret{gx}, $x, $opt{bound}, $ret{iter}, $ret{fcnt}, $opt{cgmaxit}, $opt{eps}, $opt{accrcy}, $opt{eta}, $opt{stepmx}, $opt{'print'}, $ret{info}, $opt{fg_func}): lmqn($ret{fx}, $ret{gx}, $x, $ret{iter}, $ret{fcnt}, $opt{cgmaxit}, $opt{eps}, $opt{accrcy}, $opt{eta}, $opt{stepmx}, $opt{'print'}, $ret{info}, $opt{fg_func}); if ($opt{'print'}){ if($ret{info} == 0){ print "Convergence in lmqn optimization\n"; } elsif($ret{info} == 1){ print "Too many iterations in lmqn optimization\n"; } elsif($ret{info} == 2){ print "Too many function evaluations in lmqn optimization\n"; } elsif($ret{info} == 3){ print "Line search failed to find lowest point in lmqn optimization\n"; } else{ print "Error $ret{info} in lmqn optimization\n"; } } } elsif ($function eq 'cgfam'){ $ret{gx} = $x->zeroes; #BUG => param maxit $opt{cgmethod} = pdl(long, 1) unless defined $opt{cgmethod}; $opt{eps} = pdl(1e-16) unless defined $opt{eps}; $opt{eta} = pdl(0.9) unless defined $opt{eta}; $opt{gtol} = pdl(1e-10) unless defined $opt{gtol}; $opt{'print'} = pdl(long,[-1,0])unless defined $opt{'print'}; if ( ! ref $opt{'print'}){ if ($opt{'print'} == -1){ $opt{'print'} = pdl(long,[-1,0]); } elsif ($opt{'print'} == 0){ $opt{'print'} = pdl(long,[$opt{'print'},0]); } else{ $opt{'print'} = pdl(long,[$opt{'print'},0]); } } $ret{iter} = defined $opt{maxit} ? pdl ($opt{maxit}) : pdl(long , 200); $ret{info} = pdl(long,0); $opt{fg_func}($ret{fx}, $ret{gx}, $x); cgfam($ret{fx}, $ret{gx}, $x, $ret{iter}, $opt{gtol}, $opt{eps}, $opt{eta},$opt{'print'},$ret{info},$opt{cgmethod}, $opt{fg_func}); } } elsif ($function eq 'tensoropt'){ barf "optimize: no evaluation function\n" unless defined $opt{f_func}; $opt{f_func}($ret{fx}, $x); my $hx = zeroes($x->dim(0),$x->dim(0)); $ret{gx} = $x->zeroes; if (defined $opt{g_func}){ $opt{gtype} = 2 unless defined $opt{gtype}; $opt{g_func}($ret{gx}, $x); } else{ $opt{g_func} = $opt{f_func}; $opt{gtype} = 0; } if (defined $opt{h_func}){ $opt{htype} = 2 unless defined $opt{htype}; $opt{h_func}($hx, $x); } else{ $opt{h_func} = $opt{f_func}; $opt{htype} = 0; } if ( (! ref $opt{'print'}) && defined($opt{'print'})){ if ($opt{'print'} == -1){ $opt{'print'} = pdl(long,0); } elsif ($opt{'print'}){ $opt{'print'} = pdl(long,2); } else { $opt{'print'} = pdl(long,1); } } $ret{iter} = defined $opt{maxit} ? pdl($opt{maxit}) : pdl(long , 100); $opt{'method'} = pdl(long , 1) unless defined $opt{'method'}; $opt{gtol} = pdl(1e-10) unless defined $opt{gtol}; $opt{xtol} = pdl(1e-16) unless defined $opt{xtol}; $opt{stempx} = pdl(1) unless defined $opt{stepmx}; $opt{ipr} = pdl(long,6) unless defined $opt{ipr}; $opt{digits} = pdl(long,16) unless defined $opt{digits}; $opt{fscale} = pdl(1) unless defined $opt{fscale}; $opt{typx} = ones($x->dim(0)) unless defined $opt{typx}; tensoropt($ret{fx}, $ret{gx}, $hx, $x, $opt{'method'},$ret{iter},$opt{digits},$opt{gtype},$opt{htype},$opt{fscale}, $opt{typx},$opt{stempx},$opt{xtol},$opt{gtol},$opt{'print'},$opt{ipr}, $opt{f_func}, $opt{g_func}, $opt{h_func}); } elsif ($function eq ('gencan' )){ barf "optimize: no evaluation function\n" unless defined $opt{f_func}; $ret{gx} = $x->zeroes; if( ! defined $opt{g_func}){ $opt{gtype} = pdl(long, 1); $opt{g_func} = sub {}; } else {$opt{gtype} = pdl(long, 0);} if( ! defined $opt{h_func}){ $opt{htvtype} = pdl(long, 1); $opt{h_func} = sub {}; } else{ $opt{htvtype} = pdl(long, 0); } $opt{delta} = pdl(-1) unless defined $opt{delta}; $opt{eta} = pdl(0.9) unless defined $opt{eta}; $opt{delmin} = pdl(0.1) unless defined $opt{delmin}; $opt{ftol} = pdl(0) unless defined $opt{ftol}; $opt{fmaxit} = pdl(long, 5) unless defined $opt{fmaxit}; $opt{gmaxit} = pdl(long, 10) unless defined $opt{gmaxit}; $opt{interpmaxit} = pdl(long, 5) unless defined $opt{interpmaxit}; $opt{cgstop} = pdl(long, 1) unless defined $opt{cgstop}; $opt{cgmaxit} = pdl(long, -1) unless defined $opt{cgmaxit}; $opt{qmpmaxit} = pdl(long, 5) unless defined $opt{qmpmaxit}; $opt{cggtol} = pdl(1e-5) unless defined $opt{cggtol}; $opt{cgintol} = pdl(0.1) unless defined $opt{cgintol}; $opt{cgfitol} = pdl(1e-5) unless defined $opt{cgfitol}; $opt{qmptol} = pdl(1e-5) unless defined $opt{qmptol}; $opt{trtype} = pdl(long, 0) unless defined $opt{trtype}; $opt{nearlyq} = pdl(long,0) unless defined $opt{nealryq}; $opt{fmin} = pdl(-1e+308) unless defined $opt{fmin}; $opt{trtype} = pdl(long,0) unless defined $opt{trtype}; $opt{ncomp} = pdl(long,5) unless defined $opt{ncomp}; $opt{'print'} = pdl(long,[-1,0])unless defined $opt{'print'}; if ( ! ref $opt{'print'}){ if ($opt{'print'} == -1){ $opt{'print'} = pdl(long,[-1,0]); } elsif ($opt{'print'} == 0){ $opt{'print'} = pdl(long,[$opt{'print'},0]); } else{ $opt{'print'} = pdl(long,[$opt{'print'},0]); } } $opt{maxfc} = pdl(long , 1000) unless defined $opt{maxfc}; $opt{maxit} = pdl(long , 200) unless defined $opt{maxit}; $opt{lammax} = pdl(1e+40) unless defined $opt{lammax}; $opt{lammin} = pdl(1e-40) unless defined $opt{lammin}; $opt{theta} = pdl(1e-6) unless defined $opt{theta}; $opt{gamma} = pdl(0.0001) unless defined $opt{gamma}; $opt{beta} = pdl(0.5) unless defined $opt{beta}; $opt{sigma1} = pdl(0.1) unless defined $opt{sigma1}; $opt{sigma2} = pdl(0.9) unless defined $opt{sigma2}; $opt{nint} = pdl(2) unless defined $opt{nint}; $opt{'next'} = pdl(2) unless defined $opt{'next'}; $opt{sterel} = pdl(1e-10) unless defined $opt{sterel}; $opt{steabs} = pdl(1e-99) unless defined $opt{steabs}; $opt{epsrel} = pdl(1e-30) unless defined $opt{epsrel}; $opt{epsabs} = pdl(1e-99) unless defined $opt{epsabs}; $opt{infty} = pdl(1e+308) unless defined $opt{infty}; if (defined $opt{gtol}){ $opt{gtol1} = $opt{gtol} unless defined $opt{gtol1}; $opt{gtol2} = $opt{gtol} unless defined $opt{gtol2}; } else{ $opt{gtol1} = pdl(1-10) unless defined $opt{gtol1}; $opt{gtol2} = pdl(1e-10) unless defined $opt{gtol2}; } $ret{info} = pdl(long,0); $ret{gnorm1} = null;$ret{gnorm2} = null; $ret{iter} = null; $ret{fcnt}= null;$ret{spgfcnt}=null; $ret{gcnt} = null; $ret{cgcnt} = null; $ret{spgiter} = null; $ret{tniter} = null; $ret{tnfcnt} = null; $ret{tnstpcnt} = null; $ret{tnintcnt}= null; $ret{tnexgcnt} = null; $ret{tnexbcnt} = null; $ret{tnintfe}= null; $ret{tnexgfe}= null; $ret{tnexbfe}=null; if (! defined $opt{bound}){ $opt{bound} = zeroes($x->type, $x->dim(0),2); $opt{bound}->(,0).= pdl(-1e308); $opt{bound}->(,1).= pdl(1e308); } gencan($ret{fx}, $ret{gx}, $x, $opt{bound}, $opt{fmin}, $opt{maxit}, $opt{maxfc}, $opt{nearlyq}, $opt{gtype}, $opt{htvtype}, $opt{trtype}, $opt{fmaxit}, $opt{gmaxit}, $opt{interpmaxit}, $opt{cgstop}, $opt{cgmaxit}, $opt{qmpmaxit}, $opt{ftol}, $opt{gtol2}, $opt{gtol1}, $opt{cggtol}, $opt{cgintol}, $opt{cgfitol}, $opt{qmptol}, $opt{delta}, $opt{eta}, $opt{delmin}, $opt{lammax}, $opt{lammin}, $opt{theta}, $opt{gamma}, $opt{beta}, $opt{sigma1},$opt{sigma2}, $opt{nint}, $opt{'next'}, $opt{sterel}, $opt{steabs}, $opt{epsrel}, $opt{epsabs}, $opt{infty}, $ret{gnorm2}, $ret{gnorm1}, $ret{iter}, $ret{fcnt}, $ret{gcnt}, $ret{cgcnt}, $ret{spgiter}, $ret{spgfcnt}, $ret{tniter}, $ret{tnfcnt}, $ret{tnstpcnt}, $ret{tnintcnt}, $ret{tnexgcnt}, $ret{tnexbcnt}, $ret{tnintfe}, $ret{tnexgfe}, $ret{tnexbfe}, $opt{'print'},$opt{ncomp}, $ret{info}, $opt{f_func}, $opt{g_func}, $opt{h_func}); } elsif ($function eq 'spg'){ barf "optimize: no gradient evaluation function\n" unless defined $opt{g_func}; barf "optimize: no evaluation function\n" unless defined $opt{f_func}; # Bounded example $ret{info} = pdl(long,0); if ( (! ref $opt{'print'}) && defined($opt{'print'})){ if ($opt{'print'} == -1){ $opt{'print'} = pdl(long,0); } else { $opt{'print'} = pdl(long,1); } } $ret{fcnt} = pdl(long,0); $ret{gcnt} = pdl(long,0); $ret{iter} = defined $opt{maxit} ? pdl ($opt{maxit}) : pdl(long , 500); $opt{maxfc} = pdl(long , 1000) unless defined $opt{maxfc}; $opt{'m'} = pdl(long , 100) unless defined $opt{'m'}; $ret{gnorm1} = pdl(0); $ret{gnorm2} = pdl(0); if (defined $opt{gtol}){ $opt{gtol1} = $opt{gtol} unless defined $opt{gtol1}; $opt{gtol2} = $opt{gtol} unless defined $opt{gtol2}; } else{ $opt{gtol1} = pdl(0) unless defined $opt{gtol1}; $opt{gtol2} = pdl(1e-5) unless defined $opt{gtol2}; } $opt{pg_func} = sub{ return 0;} unless defined $opt{pg_func}; spg($ret{fx}, $x, $opt{'m'}, $ret{iter}, $opt{maxfc}, $opt{gtol1}, $opt{gtol2}, $opt{'print'}, $ret{fcnt}, $ret{gcnt}, $ret{gnorm1}, $ret{gnorm2}, $ret{info}, $opt{f_func}, $opt{g_func}, $opt{pg_func}); if ($opt{'print'}){ if($ret{info} == 0){ print "Convergence with projected gradient infinite-norm in spg optimization\n";; } elsif($ret{info} == 1){ print "Convergence with projected gradient 2-norm in spg optimization\n"; } elsif($ret{info} == 2){ print "Too many iterations in spg optimization\n"; } elsif($ret{info} == 4){ print "Error in pg_func subroutine in spg optimization\n"; } elsif($ret{info} == 5){ print "Error in f_func subroutine in spg optimization\n"; } elsif($ret{info} == 6){ print "Error in g_func subroutine in spg optimization\n"; } } } elsif ($function eq 'smnsx'){ barf "optimize: no evaluation function\n" unless defined $opt{f_func}; $ret{fx} = pdl(0); $ret{step} = defined $opt{step} ? pdl ($opt{step}) : pdl(0.5); $ret{stdev} = defined $opt{tol} ? pdl ($opt{tol}) : pdl(1e-16); smnsx($x, $ret{step}, $ret{stdev}, $ret{fx}, $opt{f_func}); } elsif ($function eq 'mnsx'){ barf "optimize: no evaluation function\n" unless defined $opt{f_func}; barf "optimize: no vertices\n" unless defined $opt{vertices}; $ret{fx} = pdl(0); $ret{vertices} = pdl $opt{vertices}; $ret{stdev} = defined $opt{tol} ? pdl ($opt{tol}) : pdl(1e-16); $opt{maxit} = pdl(long , 1000) unless defined $opt{maxit}; mnsx($x, $ret{vertices}, $opt{maxit}, $ret{stdev}, $ret{fx}, $opt{f_func}); } elsif ($function eq 'rmn'){ barf "optimize: no evaluation function\n" unless defined $opt{f_func}; my ($dim,$iv, $v); $dim = $x->dim(0); if (defined $opt{bound}){ if (defined $opt{h_func}){ barf "optimize: no gradient evaluation function\n" unless defined $opt{g_func}; $ret{gx} = $x->zeroes; $ret{hx} = zeroes($x->type, $dim *($dim+1)/2 ); $v = zeroes(78 + $dim * ($dim+27)/2 ); $iv = zeroes(long, 59 + 3*$dim); ivset(2,$iv,$v); $iv(16) .= $opt{maxfc} if defined $opt{maxfc}; $iv(17) .= $opt{maxit} if defined $opt{maxit}; if (defined $opt{'print'}){ if ($opt{'print'} == -1){ $iv(20).= 0; } elsif($opt{'print'} == 0){ $iv(18).= 0; } else{ $iv(18).= $opt{'print'}; } } else{ $iv(20).= 0; } $v(34) .= $opt{stepmx} if defined $opt{stepmx}; $v(31) .= $opt{rfctol} if defined $opt{rfctol}; $v(32) .= $opt{xctol} if defined $opt{xctol}; $opt{scale} = ones($x->type, $dim) unless defined $opt{scale}; rmnhb($ret{fx}, $ret{gx}, $ret{hx}, $x, $opt{bound}->xchg(0,1), $opt{scale}, $iv, $v, $opt{f_func}, $opt{g_func}, $opt{h_func}); } elsif (defined $opt{g_func}){ $ret{gx} = $x->zeroes; $v = zeroes(71 + $dim *( $dim + 19 )/2); $iv = zeroes(long,59+$dim); ivset(2,$iv,$v); $iv(16) .= $opt{maxfc} if defined $opt{maxfc}; $iv(17) .= $opt{maxit} if defined $opt{maxit}; if (defined $opt{'print'}){ if ($opt{'print'} == -1){ $iv(20).= 0; } elsif($opt{'print'} == 0){ $iv(18).= 0; } else{ $iv(18).= $opt{'print'}; } } else{ $iv(20).= 0; } $v(34) .= $opt{stepmx} if defined $opt{stepmx}; $v(31) .= $opt{rfctol} if defined $opt{rfctol}; $v(32) .= $opt{xctol} if defined $opt{xctol}; $opt{scale} = ones($x->type, $dim) unless defined $opt{scale}; rmngb($ret{fx}, $ret{gx}, $x, $opt{bound}->xchg(0,1), $opt{scale}, $iv, $v, $opt{f_func}, $opt{g_func}); } else{ $v = zeroes(77 + $dim *($dim+23)); $iv = zeroes(long,59+$dim); ivset(2,$iv,$v); $iv(16) .= $opt{maxfc} if defined $opt{maxfc}; $iv(17) .= $opt{maxit} if defined $opt{maxit}; if (defined $opt{'print'}){ if ($opt{'print'} == -1){ $iv(20).= 0; } elsif($opt{'print'} == 0){ $iv(18).= 0; } else{ $iv(18).= $opt{'print'}; } } else{ $iv(20).= 0; } $v(41).= $opt{eta} if defined $opt{eta}; $v(34) .= $opt{stepmx} if defined $opt{stepmx}; $v(31) .= $opt{rfctol} if defined $opt{rfctol}; $v(32) .= $opt{xctol} if defined $opt{xctol}; $opt{scale} = ones($x->type, $dim) unless defined $opt{scale}; rmnfb($ret{fx}, $ret{gx}, $x, $opt{bound}->xchg(0,1), $opt{scale}, $iv, $v, $opt{f_func}); } } else{ if (defined $opt{h_func}){ barf "optimize: no gradient evaluation function\n" unless defined $opt{g_func}; $ret{gx} = $x->zeroes; $ret{hx} = zeroes($x->type, $dim *($dim+1)/2 ); $v = zeroes(78 + $dim * ($dim+21)/2 ); $iv = zeroes(long, 59); ivset(2,$iv,$v); $iv(16) .= $opt{maxfc} if defined $opt{maxfc}; $iv(17) .= $opt{maxit} if defined $opt{maxit}; if (defined $opt{'print'}){ if ($opt{'print'} == -1){ $iv(20).= 0; } elsif($opt{'print'} == 0){ $iv(18).= 0; } else{ $iv(18).= $opt{'print'}; } } else{ $iv(20).= 0; } $v(34) .= $opt{stepmx} if defined $opt{stepmx}; $v(31) .= $opt{rfctol} if defined $opt{rfctol}; $v(32) .= $opt{xctol} if defined $opt{xctol}; $opt{scale} = ones($x->type, $dim) unless defined $opt{scale}; rmnh($ret{fx}, $ret{gx}, $ret{hx}, $x, $opt{scale}, $iv, $v, $opt{f_func}, $opt{g_func}, $opt{h_func}); } elsif (defined $opt{g_func}){ $ret{gx} = $x->zeroes; $v = zeroes(71 + $dim *( $dim + 13 )/2); $iv = zeroes(long,59); ivset(2,$iv,$v); $iv(16) .= $opt{maxfc} if defined $opt{maxfc}; $iv(17) .= $opt{maxit} if defined $opt{maxit}; if (defined $opt{'print'}){ if ($opt{'print'} == -1){ $iv(20).= 0; } elsif($opt{'print'} == 0){ $iv(18).= 0; } else{ $iv(18).= $opt{'print'}; } } else{ $iv(20).= 0; } $v(34) .= $opt{stepmx} if defined $opt{stepmx}; $v(31) .= $opt{rfctol} if defined $opt{rfctol}; $v(32) .= $opt{xctol} if defined $opt{xctol}; $opt{scale} = ones($x->type, $dim) unless defined $opt{scale}; rmng($ret{fx}, $ret{gx}, $x, $opt{scale}, $iv, $v, $opt{f_func}, $opt{g_func}); } else{ $v = zeroes(77 + $dim *($dim+17)/2); $iv = zeroes(long,59); ivset(2,$iv,$v); $iv(16) .= $opt{maxfc} if defined $opt{maxfc}; $iv(17) .= $opt{maxit} if defined $opt{maxit}; if (defined $opt{'print'}){ if ($opt{'print'} == -1){ $iv(20).= 0; } elsif($opt{'print'} == 0){ $iv(18).= 0; } else{ $iv(18).= $opt{'print'}; } } else{ $iv(20).= 0; } $v(41).= $opt{eta} if defined $opt{eta}; $v(34) .= $opt{stepmx} if defined $opt{stepmx}; $v(31) .= $opt{rfctol} if defined $opt{rfctol}; $v(32) .= $opt{xctol} if defined $opt{xctol}; $opt{scale} = ones($x->type, $dim) unless defined $opt{scale}; rmnf($ret{fx}, $ret{gx}, $x, $opt{scale}, $iv, $v, $opt{f_func}); } } $ret{fcnt} = $iv(5); $ret{gcnt} = $iv(29); $ret{info} = $iv(0); $ret{iter} = $iv(30); $ret{fx} = $v(9); $ret{gnorm2} = $v(0); } else{ barf "$function is not supported\n"; } wantarray ? return $x, %ret : return $x; } sub rosen_grad{ my $a = shift; my( $am, $am_m1, $am_p1, $grad); $am = $a(1:-2); $am_m1 = $a(:-3); $am_p1 = $a(2:); $grad = $a->zeroes; $grad(1:-2) .= 200 *( $am - $am_m1->power(2,0)) - 400*($am_p1 - $am->power(2,0))*$am - 2*(1-$am); $grad(0) .= -400 * $a(0) * ($a(1) - $a(0)->power(2,0)) - 2*(1-$a(0)); $grad(-1) .= 200 * ( $a(-1) - $a(-2)->power(2,0) ); return $grad; } sub rosen_hess{ my ($a, $squared) = @_; my ($hess,$diag); #$diag = $a(:-2)->mult(-400,0)->diag(1); #$hess = $diag + $diag->xchg(0,1); $hess = $a(:-2)->mult(-400,0)->diag(1); $diag = $a->zeroes; $diag(0) .= 1200 * $a(0) - 400 * $a(1) + 2; $diag(-1) .= 200; $diag(1:-2) .= 202 + 1200 * $a(1:-2)->power(2,0) - 400 * $a(2:); $hess->diagonal(0,1) += $diag; $squared ? return $hess->tritosym : return $hess; } =head1 COPYRIGHT Copyright (C) Grégory Vanuxem 2005. All rights reserved. This program is free software; you can redistribute it and/or modify it under the same terms as Perl itself. =cut EOD pp_add_boot(<pdlnew(); pdl2 = PDL->pdlnew(); pdl3 = PDL->pdlnew(); pdl4 = PDL->pdlnew(); pdl5 = PDL->pdlnew(); sv_pdl1 = newSV(0); sv_pdl2 = newSV(0); sv_pdl3 = newSV(0); sv_pdl4 = newSV(0); sv_pdl5 = newSV(0); PDL->SetSV_PDL(sv_pdl1, pdl1); PDL->SetSV_PDL(sv_pdl2, pdl2); PDL->SetSV_PDL(sv_pdl3, pdl3); PDL->SetSV_PDL(sv_pdl4, pdl4); PDL->SetSV_PDL(sv_pdl5, pdl5); EOB pp_done(); # you will need this to finish pp processing