############################## # # SecurityGroup.t # # Before `make install' is performed this script should be runnable with # `make test'. After `make install' it should work as `perl SecurityGroup.t` ############################## # C O P Y R I G H T N O T I C E # Copyright (c) 2001-2006 by: # * The MicroArray Gene Expression Database Society (MGED) # # Permission is hereby granted, free of charge, to any person # obtaining a copy of this software and associated documentation files # (the "Software"), to deal in the Software without restriction, # including without limitation the rights to use, copy, modify, merge, # publish, distribute, sublicense, and/or sell copies of the Software, # and to permit persons to whom the Software is furnished to do so, # subject to the following conditions: # # The above copyright notice and this permission notice shall be # included in all copies or substantial portions of the Software. # # THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, # EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF # MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND # NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS # BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN # ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN # CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE # SOFTWARE. use Carp; # use blib; use Test::More tests => 107; use strict; use Bio::MAGE; use Bio::MAGE::Association; BEGIN { use_ok('Bio::MAGE::AuditAndSecurity::SecurityGroup') }; use Bio::MAGE::NameValueType; use Bio::MAGE::AuditAndSecurity::Audit; use Bio::MAGE::AuditAndSecurity::Security; use Bio::MAGE::AuditAndSecurity::Contact; use Bio::MAGE::Description::Description; # we test the new() method my $securitygroup; { # silence the abstract class warnings local $SIG{__WARN__} = sub {'IGNORE'}; $securitygroup = Bio::MAGE::AuditAndSecurity::SecurityGroup->new(); } isa_ok($securitygroup, 'Bio::MAGE::AuditAndSecurity::SecurityGroup'); # test the package_name class method is($securitygroup->package_name(), q[AuditAndSecurity], 'package'); # test the class_name class method is($securitygroup->class_name(), q[Bio::MAGE::AuditAndSecurity::SecurityGroup], 'class_name'); # set the attribute values in the call to new() { # silence the abstract class warnings local $SIG{__WARN__} = sub {'IGNORE'}; $securitygroup = Bio::MAGE::AuditAndSecurity::SecurityGroup->new(identifier => '1', name => '2'); } # # testing attribute identifier # # test attribute values can be set in new() is($securitygroup->getIdentifier(), '1', 'identifier new'); # test getter/setter $securitygroup->setIdentifier('1'); is($securitygroup->getIdentifier(), '1', 'identifier getter/setter'); # test getter throws exception with argument eval {$securitygroup->getIdentifier(1)}; ok($@, 'identifier getter throws exception with argument'); # test setter throws exception with no argument eval {$securitygroup->setIdentifier()}; ok($@, 'identifier setter throws exception with no argument'); # test setter throws exception with too many argument eval {$securitygroup->setIdentifier('1', '1')}; ok($@, 'identifier setter throws exception with too many argument'); # test setter accepts undef eval {$securitygroup->setIdentifier(undef)}; ok((!$@ and not defined $securitygroup->getIdentifier()), 'identifier setter accepts undef'); # # testing attribute name # # test attribute values can be set in new() is($securitygroup->getName(), '2', 'name new'); # test getter/setter $securitygroup->setName('2'); is($securitygroup->getName(), '2', 'name getter/setter'); # test getter throws exception with argument eval {$securitygroup->getName(1)}; ok($@, 'name getter throws exception with argument'); # test setter throws exception with no argument eval {$securitygroup->setName()}; ok($@, 'name setter throws exception with no argument'); # test setter throws exception with too many argument eval {$securitygroup->setName('2', '2')}; ok($@, 'name setter throws exception with too many argument'); # test setter accepts undef eval {$securitygroup->setName(undef)}; ok((!$@ and not defined $securitygroup->getName()), 'name setter accepts undef'); # retrieve the list of association meta-data my %assns = Bio::MAGE::AuditAndSecurity::SecurityGroup->associations(); # set the association values in the call to new() { # silence the abstract class warnings local $SIG{__WARN__} = sub {'IGNORE'}; $securitygroup = Bio::MAGE::AuditAndSecurity::SecurityGroup->new(members => [Bio::MAGE::AuditAndSecurity::Contact->new()], descriptions => [Bio::MAGE::Description::Description->new()], security => Bio::MAGE::AuditAndSecurity::Security->new(), auditTrail => [Bio::MAGE::AuditAndSecurity::Audit->new()], propertySets => [Bio::MAGE::NameValueType->new()]); } my ($end, $assn); # testing association members my $members_assn; { # silence the abstract class warnings local $SIG{__WARN__} = sub {'IGNORE'}; $members_assn = Bio::MAGE::AuditAndSecurity::Contact->new(); } ok((UNIVERSAL::isa($securitygroup->getMembers,'ARRAY') and scalar @{$securitygroup->getMembers} == 1 and UNIVERSAL::isa($securitygroup->getMembers->[0], q[Bio::MAGE::AuditAndSecurity::Contact])), 'members set in new()'); ok(eq_array($securitygroup->setMembers([$members_assn]), [$members_assn]), 'setMembers returns correct value'); ok((UNIVERSAL::isa($securitygroup->getMembers,'ARRAY') and scalar @{$securitygroup->getMembers} == 1 and $securitygroup->getMembers->[0] == $members_assn), 'getMembers fetches correct value'); is($securitygroup->addMembers($members_assn), 2, 'addMembers returns number of items in list'); ok((UNIVERSAL::isa($securitygroup->getMembers,'ARRAY') and scalar @{$securitygroup->getMembers} == 2 and $securitygroup->getMembers->[0] == $members_assn and $securitygroup->getMembers->[1] == $members_assn), 'addMembers adds correct value'); # test setMembers throws exception with non-array argument eval {$securitygroup->setMembers(1)}; ok($@, 'setMembers throws exception with non-array argument'); # test setMembers throws exception with bad argument array eval {$securitygroup->setMembers([1])}; ok($@, 'setMembers throws exception with bad argument array'); # test addMembers throws exception with no arguments eval {$securitygroup->addMembers()}; ok($@, 'addMembers throws exception with no arguments'); # test addMembers throws exception with bad argument eval {$securitygroup->addMembers(1)}; ok($@, 'addMembers throws exception with bad array'); # test setMembers accepts empty array ref eval {$securitygroup->setMembers([])}; ok((!$@ and defined $securitygroup->getMembers() and UNIVERSAL::isa($securitygroup->getMembers, 'ARRAY') and scalar @{$securitygroup->getMembers} == 0), 'setMembers accepts empty array ref'); # test getMembers throws exception with argument eval {$securitygroup->getMembers(1)}; ok($@, 'getMembers throws exception with argument'); # test setMembers throws exception with no argument eval {$securitygroup->setMembers()}; ok($@, 'setMembers throws exception with no argument'); # test setMembers throws exception with too many argument eval {$securitygroup->setMembers(1,2)}; ok($@, 'setMembers throws exception with too many argument'); # test setMembers accepts undef eval {$securitygroup->setMembers(undef)}; ok((!$@ and not defined $securitygroup->getMembers()), 'setMembers accepts undef'); # test the meta-data for the assoication $assn = $assns{members}; isa_ok($assn, 'Bio::MAGE::Association'); $end = $assn->other(); isa_ok($end, 'Bio::MAGE::Association::End'); ok((defined $end and defined $end->documentation(), and defined $end->cardinality(), and grep {$_ eq $end->cardinality} ('0..1','1','1..N','0..N'), and defined $end->is_ref(), and ($end->is_ref() == 0 or $end->is_ref() == 1), and defined $end->rank(), and $end->rank(), and defined $end->ordered(), and ($end->ordered() == 0 or $end->ordered() == 1), and defined $end->class_name(), and $end->class_name(), and defined $end->name(), and $end->name()), 'members->other() is a valid Bio::MAGE::Association::End' ); $end = $assn->self(); isa_ok($end, 'Bio::MAGE::Association::End'); ok((defined $end and defined $end->documentation(), and defined $end->cardinality(), and grep {$_ eq $end->cardinality} ('0..1','1','1..N','0..N'), and defined $end->is_ref(), and ($end->is_ref() == 0 or $end->is_ref() == 1), and defined $end->class_name(), and $end->class_name()), 'members->self() is a valid Bio::MAGE::Association::End' ); # testing association descriptions my $descriptions_assn; { # silence the abstract class warnings local $SIG{__WARN__} = sub {'IGNORE'}; $descriptions_assn = Bio::MAGE::Description::Description->new(); } ok((UNIVERSAL::isa($securitygroup->getDescriptions,'ARRAY') and scalar @{$securitygroup->getDescriptions} == 1 and UNIVERSAL::isa($securitygroup->getDescriptions->[0], q[Bio::MAGE::Description::Description])), 'descriptions set in new()'); ok(eq_array($securitygroup->setDescriptions([$descriptions_assn]), [$descriptions_assn]), 'setDescriptions returns correct value'); ok((UNIVERSAL::isa($securitygroup->getDescriptions,'ARRAY') and scalar @{$securitygroup->getDescriptions} == 1 and $securitygroup->getDescriptions->[0] == $descriptions_assn), 'getDescriptions fetches correct value'); is($securitygroup->addDescriptions($descriptions_assn), 2, 'addDescriptions returns number of items in list'); ok((UNIVERSAL::isa($securitygroup->getDescriptions,'ARRAY') and scalar @{$securitygroup->getDescriptions} == 2 and $securitygroup->getDescriptions->[0] == $descriptions_assn and $securitygroup->getDescriptions->[1] == $descriptions_assn), 'addDescriptions adds correct value'); # test setDescriptions throws exception with non-array argument eval {$securitygroup->setDescriptions(1)}; ok($@, 'setDescriptions throws exception with non-array argument'); # test setDescriptions throws exception with bad argument array eval {$securitygroup->setDescriptions([1])}; ok($@, 'setDescriptions throws exception with bad argument array'); # test addDescriptions throws exception with no arguments eval {$securitygroup->addDescriptions()}; ok($@, 'addDescriptions throws exception with no arguments'); # test addDescriptions throws exception with bad argument eval {$securitygroup->addDescriptions(1)}; ok($@, 'addDescriptions throws exception with bad array'); # test setDescriptions accepts empty array ref eval {$securitygroup->setDescriptions([])}; ok((!$@ and defined $securitygroup->getDescriptions() and UNIVERSAL::isa($securitygroup->getDescriptions, 'ARRAY') and scalar @{$securitygroup->getDescriptions} == 0), 'setDescriptions accepts empty array ref'); # test getDescriptions throws exception with argument eval {$securitygroup->getDescriptions(1)}; ok($@, 'getDescriptions throws exception with argument'); # test setDescriptions throws exception with no argument eval {$securitygroup->setDescriptions()}; ok($@, 'setDescriptions throws exception with no argument'); # test setDescriptions throws exception with too many argument eval {$securitygroup->setDescriptions(1,2)}; ok($@, 'setDescriptions throws exception with too many argument'); # test setDescriptions accepts undef eval {$securitygroup->setDescriptions(undef)}; ok((!$@ and not defined $securitygroup->getDescriptions()), 'setDescriptions accepts undef'); # test the meta-data for the assoication $assn = $assns{descriptions}; isa_ok($assn, 'Bio::MAGE::Association'); $end = $assn->other(); isa_ok($end, 'Bio::MAGE::Association::End'); ok((defined $end and defined $end->documentation(), and defined $end->cardinality(), and grep {$_ eq $end->cardinality} ('0..1','1','1..N','0..N'), and defined $end->is_ref(), and ($end->is_ref() == 0 or $end->is_ref() == 1), and defined $end->rank(), and $end->rank(), and defined $end->ordered(), and ($end->ordered() == 0 or $end->ordered() == 1), and defined $end->class_name(), and $end->class_name(), and defined $end->name(), and $end->name()), 'descriptions->other() is a valid Bio::MAGE::Association::End' ); $end = $assn->self(); isa_ok($end, 'Bio::MAGE::Association::End'); ok((defined $end and defined $end->documentation(), and defined $end->cardinality(), and grep {$_ eq $end->cardinality} ('0..1','1','1..N','0..N'), and defined $end->is_ref(), and ($end->is_ref() == 0 or $end->is_ref() == 1), and defined $end->class_name(), and $end->class_name()), 'descriptions->self() is a valid Bio::MAGE::Association::End' ); # testing association security my $security_assn; { # silence the abstract class warnings local $SIG{__WARN__} = sub {'IGNORE'}; $security_assn = Bio::MAGE::AuditAndSecurity::Security->new(); } isa_ok($securitygroup->getSecurity, q[Bio::MAGE::AuditAndSecurity::Security]); is($securitygroup->setSecurity($security_assn), $security_assn, 'setSecurity returns value'); ok($securitygroup->getSecurity() == $security_assn, 'getSecurity fetches correct value'); # test setSecurity throws exception with bad argument eval {$securitygroup->setSecurity(1)}; ok($@, 'setSecurity throws exception with bad argument'); # test getSecurity throws exception with argument eval {$securitygroup->getSecurity(1)}; ok($@, 'getSecurity throws exception with argument'); # test setSecurity throws exception with no argument eval {$securitygroup->setSecurity()}; ok($@, 'setSecurity throws exception with no argument'); # test setSecurity throws exception with too many argument eval {$securitygroup->setSecurity(1,2)}; ok($@, 'setSecurity throws exception with too many argument'); # test setSecurity accepts undef eval {$securitygroup->setSecurity(undef)}; ok((!$@ and not defined $securitygroup->getSecurity()), 'setSecurity accepts undef'); # test the meta-data for the assoication $assn = $assns{security}; isa_ok($assn, 'Bio::MAGE::Association'); $end = $assn->other(); isa_ok($end, 'Bio::MAGE::Association::End'); ok((defined $end and defined $end->documentation(), and defined $end->cardinality(), and grep {$_ eq $end->cardinality} ('0..1','1','1..N','0..N'), and defined $end->is_ref(), and ($end->is_ref() == 0 or $end->is_ref() == 1), and defined $end->rank(), and $end->rank(), and defined $end->ordered(), and ($end->ordered() == 0 or $end->ordered() == 1), and defined $end->class_name(), and $end->class_name(), and defined $end->name(), and $end->name()), 'security->other() is a valid Bio::MAGE::Association::End' ); $end = $assn->self(); isa_ok($end, 'Bio::MAGE::Association::End'); ok((defined $end and defined $end->documentation(), and defined $end->cardinality(), and grep {$_ eq $end->cardinality} ('0..1','1','1..N','0..N'), and defined $end->is_ref(), and ($end->is_ref() == 0 or $end->is_ref() == 1), and defined $end->class_name(), and $end->class_name()), 'security->self() is a valid Bio::MAGE::Association::End' ); # testing association auditTrail my $audittrail_assn; { # silence the abstract class warnings local $SIG{__WARN__} = sub {'IGNORE'}; $audittrail_assn = Bio::MAGE::AuditAndSecurity::Audit->new(); } ok((UNIVERSAL::isa($securitygroup->getAuditTrail,'ARRAY') and scalar @{$securitygroup->getAuditTrail} == 1 and UNIVERSAL::isa($securitygroup->getAuditTrail->[0], q[Bio::MAGE::AuditAndSecurity::Audit])), 'auditTrail set in new()'); ok(eq_array($securitygroup->setAuditTrail([$audittrail_assn]), [$audittrail_assn]), 'setAuditTrail returns correct value'); ok((UNIVERSAL::isa($securitygroup->getAuditTrail,'ARRAY') and scalar @{$securitygroup->getAuditTrail} == 1 and $securitygroup->getAuditTrail->[0] == $audittrail_assn), 'getAuditTrail fetches correct value'); is($securitygroup->addAuditTrail($audittrail_assn), 2, 'addAuditTrail returns number of items in list'); ok((UNIVERSAL::isa($securitygroup->getAuditTrail,'ARRAY') and scalar @{$securitygroup->getAuditTrail} == 2 and $securitygroup->getAuditTrail->[0] == $audittrail_assn and $securitygroup->getAuditTrail->[1] == $audittrail_assn), 'addAuditTrail adds correct value'); # test setAuditTrail throws exception with non-array argument eval {$securitygroup->setAuditTrail(1)}; ok($@, 'setAuditTrail throws exception with non-array argument'); # test setAuditTrail throws exception with bad argument array eval {$securitygroup->setAuditTrail([1])}; ok($@, 'setAuditTrail throws exception with bad argument array'); # test addAuditTrail throws exception with no arguments eval {$securitygroup->addAuditTrail()}; ok($@, 'addAuditTrail throws exception with no arguments'); # test addAuditTrail throws exception with bad argument eval {$securitygroup->addAuditTrail(1)}; ok($@, 'addAuditTrail throws exception with bad array'); # test setAuditTrail accepts empty array ref eval {$securitygroup->setAuditTrail([])}; ok((!$@ and defined $securitygroup->getAuditTrail() and UNIVERSAL::isa($securitygroup->getAuditTrail, 'ARRAY') and scalar @{$securitygroup->getAuditTrail} == 0), 'setAuditTrail accepts empty array ref'); # test getAuditTrail throws exception with argument eval {$securitygroup->getAuditTrail(1)}; ok($@, 'getAuditTrail throws exception with argument'); # test setAuditTrail throws exception with no argument eval {$securitygroup->setAuditTrail()}; ok($@, 'setAuditTrail throws exception with no argument'); # test setAuditTrail throws exception with too many argument eval {$securitygroup->setAuditTrail(1,2)}; ok($@, 'setAuditTrail throws exception with too many argument'); # test setAuditTrail accepts undef eval {$securitygroup->setAuditTrail(undef)}; ok((!$@ and not defined $securitygroup->getAuditTrail()), 'setAuditTrail accepts undef'); # test the meta-data for the assoication $assn = $assns{auditTrail}; isa_ok($assn, 'Bio::MAGE::Association'); $end = $assn->other(); isa_ok($end, 'Bio::MAGE::Association::End'); ok((defined $end and defined $end->documentation(), and defined $end->cardinality(), and grep {$_ eq $end->cardinality} ('0..1','1','1..N','0..N'), and defined $end->is_ref(), and ($end->is_ref() == 0 or $end->is_ref() == 1), and defined $end->rank(), and $end->rank(), and defined $end->ordered(), and ($end->ordered() == 0 or $end->ordered() == 1), and defined $end->class_name(), and $end->class_name(), and defined $end->name(), and $end->name()), 'auditTrail->other() is a valid Bio::MAGE::Association::End' ); $end = $assn->self(); isa_ok($end, 'Bio::MAGE::Association::End'); ok((defined $end and defined $end->documentation(), and defined $end->cardinality(), and grep {$_ eq $end->cardinality} ('0..1','1','1..N','0..N'), and defined $end->is_ref(), and ($end->is_ref() == 0 or $end->is_ref() == 1), and defined $end->class_name(), and $end->class_name()), 'auditTrail->self() is a valid Bio::MAGE::Association::End' ); # testing association propertySets my $propertysets_assn; { # silence the abstract class warnings local $SIG{__WARN__} = sub {'IGNORE'}; $propertysets_assn = Bio::MAGE::NameValueType->new(); } ok((UNIVERSAL::isa($securitygroup->getPropertySets,'ARRAY') and scalar @{$securitygroup->getPropertySets} == 1 and UNIVERSAL::isa($securitygroup->getPropertySets->[0], q[Bio::MAGE::NameValueType])), 'propertySets set in new()'); ok(eq_array($securitygroup->setPropertySets([$propertysets_assn]), [$propertysets_assn]), 'setPropertySets returns correct value'); ok((UNIVERSAL::isa($securitygroup->getPropertySets,'ARRAY') and scalar @{$securitygroup->getPropertySets} == 1 and $securitygroup->getPropertySets->[0] == $propertysets_assn), 'getPropertySets fetches correct value'); is($securitygroup->addPropertySets($propertysets_assn), 2, 'addPropertySets returns number of items in list'); ok((UNIVERSAL::isa($securitygroup->getPropertySets,'ARRAY') and scalar @{$securitygroup->getPropertySets} == 2 and $securitygroup->getPropertySets->[0] == $propertysets_assn and $securitygroup->getPropertySets->[1] == $propertysets_assn), 'addPropertySets adds correct value'); # test setPropertySets throws exception with non-array argument eval {$securitygroup->setPropertySets(1)}; ok($@, 'setPropertySets throws exception with non-array argument'); # test setPropertySets throws exception with bad argument array eval {$securitygroup->setPropertySets([1])}; ok($@, 'setPropertySets throws exception with bad argument array'); # test addPropertySets throws exception with no arguments eval {$securitygroup->addPropertySets()}; ok($@, 'addPropertySets throws exception with no arguments'); # test addPropertySets throws exception with bad argument eval {$securitygroup->addPropertySets(1)}; ok($@, 'addPropertySets throws exception with bad array'); # test setPropertySets accepts empty array ref eval {$securitygroup->setPropertySets([])}; ok((!$@ and defined $securitygroup->getPropertySets() and UNIVERSAL::isa($securitygroup->getPropertySets, 'ARRAY') and scalar @{$securitygroup->getPropertySets} == 0), 'setPropertySets accepts empty array ref'); # test getPropertySets throws exception with argument eval {$securitygroup->getPropertySets(1)}; ok($@, 'getPropertySets throws exception with argument'); # test setPropertySets throws exception with no argument eval {$securitygroup->setPropertySets()}; ok($@, 'setPropertySets throws exception with no argument'); # test setPropertySets throws exception with too many argument eval {$securitygroup->setPropertySets(1,2)}; ok($@, 'setPropertySets throws exception with too many argument'); # test setPropertySets accepts undef eval {$securitygroup->setPropertySets(undef)}; ok((!$@ and not defined $securitygroup->getPropertySets()), 'setPropertySets accepts undef'); # test the meta-data for the assoication $assn = $assns{propertySets}; isa_ok($assn, 'Bio::MAGE::Association'); $end = $assn->other(); isa_ok($end, 'Bio::MAGE::Association::End'); ok((defined $end and defined $end->documentation(), and defined $end->cardinality(), and grep {$_ eq $end->cardinality} ('0..1','1','1..N','0..N'), and defined $end->is_ref(), and ($end->is_ref() == 0 or $end->is_ref() == 1), and defined $end->rank(), and $end->rank(), and defined $end->ordered(), and ($end->ordered() == 0 or $end->ordered() == 1), and defined $end->class_name(), and $end->class_name(), and defined $end->name(), and $end->name()), 'propertySets->other() is a valid Bio::MAGE::Association::End' ); $end = $assn->self(); isa_ok($end, 'Bio::MAGE::Association::End'); ok((defined $end and defined $end->documentation(), and defined $end->cardinality(), and grep {$_ eq $end->cardinality} ('0..1','1','1..N','0..N'), and defined $end->is_ref(), and ($end->is_ref() == 0 or $end->is_ref() == 1), and defined $end->class_name(), and $end->class_name()), 'propertySets->self() is a valid Bio::MAGE::Association::End' ); my $identifiable; { # silence the abstract class warnings local $SIG{__WARN__} = sub {'IGNORE'}; # create a superclass $identifiable = Bio::MAGE::Identifiable->new(); } # testing superclass Identifiable isa_ok($identifiable, q[Bio::MAGE::Identifiable]); isa_ok($securitygroup, q[Bio::MAGE::Identifiable]);