#########
# Author: rmp
# Maintainer: rmp
# Created: 2003-06-13
# Last Modified: 2003-06-13
# Pulls features over command-line SRS/getz transport
#
package Bio::Das::ProServer::SourceAdaptor::Transport::getz;

=head1 AUTHOR

Roger Pettett <rmp@sanger.ac.uk>.

Copyright (c) 2003 The Sanger Institute

This library is free software; you can redistribute it and/or modify
it under the same terms as Perl itself.  See DISCLAIMER.txt for
disclaimers of warranty.

=cut

use strict;
use Bio::Das::ProServer::SourceAdaptor::Transport::generic;
use vars qw(@ISA);
@ISA = qw(Bio::Das::ProServer::SourceAdaptor::Transport::generic);

sub query {
  my $self     = shift;
  my ($sgetz)  = ($self->config->{'getz'} || "/usr/local/bin/getz") =~ /([a-zA-Z0-9\-\_\.\/]+)/;
  my $query    = join(' ', @_);
  my ($squery) = $query =~ /([a-zA-Z0-9\[\]\(\)\{\}\.\-_\>\<\:\'\" \|]+)/;
  warn qq(Detainted '$squery' != '$query') if($squery ne $query);
  return `$sgetz $squery`;
}

1;