MW-ssNA
Perl module to calculate molecular weight of ssDNA or ssRNA.
INSTALLATION
To install this module, run the following commands:
perl Makefile.PL
make
make test
make install
MODULE INFORMATION:
The input file may contain one or more sequences (should be in FASTA format).
The formulas used to calculate molecular weight of ssDNA and ssRNA are;
ssDNA : ssdna = (An * 313.2) + (Tn * 304.2) + (Gn * 329.2) + (Cn * 289.2);
ssRNA : ssrna = (An * 329.2) + (Un * 306.2) + (Gn * 345.2) + (Cn * 305.2);
where 'n' refers to the total number of occurrences.
The option values are;
'd' - to find molecular weight of ssDNA
'r' - to find molecular weight of ssRNA
'cd' - To get the total count of ATGC in DNA input sequence(s)
'cr' - To get the total count of AUGC in RNA input sequence(s)
LICENSE AND COPYRIGHT
Copyright 2011 Shankar M.
This program is free software; you can redistribute it and/or modify it under the same terms as Perl itself.