######### # Author: rmp # Maintainer: rmp # Created: 2003-12-12 # Last Modified: $Date: 2008-12-03 23:35:54 +0000 (Wed, 03 Dec 2008) $ $Author: zerojinx $ # Id: $Id: SourceHydra.pm 549 2008-12-03 23:35:54Z zerojinx $ # Source: $Source: /nfs/team117/rmp/tmp/Bio-Das-ProServer/Bio-Das-ProServer/lib/Bio/Das/ProServer/SourceHydra.pm,v $ # $HeadURL: https://proserver.svn.sf.net/svnroot/proserver/trunk/lib/Bio/Das/ProServer/SourceHydra.pm $ # # Dynamic SourceAdaptor broker # package Bio::Das::ProServer::SourceHydra; use strict; use warnings; use Bio::Das::ProServer::SourceAdaptor; use English qw(-no_match_vars); use Carp; our $VERSION = do { my ($v) = (q$Revision: 549 $ =~ /\d+/mxg); $v; }; sub new { my ($class, $defs) = @_; my $self = { 'dsn' => $defs->{'dsn'} || q(), 'config' => $defs->{'config'}, 'debug' => $defs->{'debug'} || undef, }; bless $self, $class; $self->init($defs); return $self; } sub init {return;} sub transport { my $self = shift; if(!exists $self->{'_transport'} && $self->config->{'transport'}) { my $transport = 'Bio::Das::ProServer::SourceAdaptor::Transport::'.$self->config->{'transport'}; eval "require $transport" or do { ## no critic (BuiltinFunctions::ProhibitStringyEval) carp $EVAL_ERROR; return; }; $self->{'_transport'} = $transport->new({ config => $self->config(), }); } return $self->{'_transport'}; } sub config { my ($self, $config) = @_; if($config) { $self->{'config'} = $config; } return $self->{'config'}; } sub sources {return;} 1; __END__ =head1 NAME Bio::Das::ProServer::SourceHydra - A runtime factory for B::D::P::SourceAdaptors =head1 VERSION $Revision: 549 $ =head1 SYNOPSIS Inherit and extend this class to provide hydra implementations =head1 AUTHOR Roger Pettett . =head1 LICENSE AND COPYRIGHT Copyright (c) 2007 The Sanger Institute This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. See DISCLAIMER.txt for disclaimers of warranty. =head1 DESCRIPTION The SourceHydra's role is to clone a series of SourceAdaptors of the same type but each configured in a (systematically) different way, but with only one configuration file section. For example the hydra is pivotal in the Ensembl upload service where each data upload is of the same structure and loaded into a numbered table in a database. In order to provide a valid DSN for each uploaded source, the hydra then clones a series of dbi-based sources, pointing them all at the upload database but each one at a different table. The hydra can also be useful in situations such as the provision of similar sources for different species where the data are in different databases but have the same structure in each. =head1 SUBROUTINES/METHODS =head2 new : Constructor my $hydra = Bio::Das::ProServer::SourceHydra->new({ 'config' => $cfg, # The config section for this hydra 'debug' => $dbg, # Boolean debug flag }); =head2 init : Post-construction initialisation method Implemented in subclasses if necessary (not usually) =head2 transport : Build the relevant transport configured for this adaptor my $transport = $hydra->transport(); =head2 config : Accessor for config section for this hydra (set at construction) my $cfg = $hydra->config(); =head2 sources : Implemented in subclasses - returns an of source names my @sources = $hydra->sources(); =head1 CONFIGURATION AND ENVIRONMENT Configure in proserver.ini using: hydra = =head1 DIAGNOSTICS Set $self->{'debug'} = 1; Or B::D::P::SourceHydra::impl->new({'debug'=>1}); =head1 DEPENDENCIES Bio::Das::ProServer::SourceAdaptor =head1 INCOMPATIBILITIES =head1 BUGS AND LIMITATIONS =cut