#NEXUS
begin taxa;
	dimensions ntax=163;
	taxlabels
	Chondrus_crispus_AAA18589.1	Leishmania_major_AAA19789.1	Cryptosporidium_parvum_AAA28295.1	Drosophila_melanogaster_AAA28320.1	Euplotes_crassus_AAA29122.1	Oxytricha_nova_AAA29393.1	Oxytricha_fallax_AAA29394.1	Plasmodium_falciparum_AAA29465.1	Plasmodium_falciparum_AAA29467.1	Pisaster_ochraceus_AAA29787.1	Pisaster_ochraceus_AAA29788.1	Physarum_polycephalum_AAA29973.1	Strongylocentrotus_purpuratus_AAA30030.1	Strongylocentrotus_purpuratus_AAA30032.1	Strongylocentrotus_purpuratus_AAA30042.1	Taenia_solium_AAA30092.1	Tetrahymena_thermophila_AAA30109.1	Trypanosoma_brucei_AAA30151.1	Trypanosoma_brucei_AAA30152.1	Emericella_nidulans_AAA33290.1	Phytophthora_infestans_AAA33749.1	Phytophthora_infestans_AAA33750.1	Glycine_max_AAA33939.1	Volvox_carteri_AAA34243.1	Kluyveromyces_lactis_AAA35251.1	Mus_musculus_AAA37141.1	Ctenopharyngodon_idella_AAA49197.1	Xenopus_laevis_AAA49638.1	Xenopus_laevis_AAA49639.1	Oxytricha_nova_AAA50195.1	Homo_sapiens_AAA51579.1	Anopheles_gambiae_AAA56881.1	Bactrocera_dorsalis_AAA62341.1	Bactrocera_dorsalis_AAA62342.1	Bactrocera_dorsalis_AAA62343.1	Bactrocera_dorsalis_AAA62344.1	Cricetulus_griseus_AAA64871.1	Cyprinus_carpio_AAA68886.1	Bos_taurus_AAA82873.1	Oxytricha_trifallax_AAA85836.1	Heliocidaris_tuberculata_AAA86534.1	Heliocidaris_erythrogramma_AAA86869.1	Heliocidaris_erythrogramma_AAA96348.1	Heliocidaris_tuberculata_AAA96349.1	Gallus_gallus_AAB12010.1	Tripneustes_gratilla_AAB31965.2	Naegleria_fowleri_AAB42183.1	Homo_sapiens_AAB59619.1	Arabidopsis_thaliana_AAB63535.1	Glycine_max_AAC05272.1	Toxoplasma_gondii_AAC13766.1	Mesostigma_viride_AAC16055.1	Candida_glabrata_AAC25760.1	Gossypium_hirsutum_AAC31886.1	Pichia_angusta_AAC34678.1	Bombyx_mori_AAC47432.1	Trichomonas_vaginalis_AAC47679.1	Sus_scrofa_AAC48692.1	Striga_asiatica_AAC49651.1	Striga_asiatica_AAC49652.1	Chlamydomonas_reinhardtii_AAC49834.1	Fugu_rubripes_AAC59889.1	Fugu_rubripes_AAC59891.1	Fugu_rubripes_AAC59892.1	Fugu_rubripes_AAC59893.1	Fugu_rubripes_AAC59894.1	Fugu_rubripes_AAC59897.1	Neurospora_crassa_AAC78496.1	Echinococcus_granulosus_AAC80573.1	Echinococcus_granulosus_AAC80574.1	Setaria_digitata_AAD13153.1	Oryzias_latipes_AAD14159.2	Schizophyllum_commune_AAD38204.1	Suillus_bovinus_AAD38849.1	Schizophyllum_commune_AAD38853.1	Suillus_bovinus_AAD38855.1	Plasmodium_falciparum_AAD55770.1	Penicillium_chrysogenum_AAF00007.1	Hypotrichida_sp_AAF00921.1	Urostyla_grandis_AAF00922.1	Halteria_grandinella_AAF00923.1	Arabidopsis_thaliana_AAF18605.1	Wuchereria_bancrofti_AAF25819.1	Rivulus_marmoratus_AAF26678.1	Pichia_pastoris_AAF27627.1	Naegleria_gruberi_AAF37002.1	Avena_nuda_AAF40438.1	Drosophila_melanogaster_AAF46098.1	Drosophila_melanogaster_AAF46640.1	Drosophila_melanogaster_AAF51800.1	Drosophila_melanogaster_AAF55198.1	Drosophila_melanogaster_AAF57954.1	Platichthys_flesus_AAF63665.1	Rhynchocypris_oxycephalus_AAF63689.1	Arabidopsis_thaliana_AAF69724.1	Ictalurus_punctatus_AAF81097.1	Hypophthalmichthys_molitrix_AAG17452.1	Rhodeus_notatus_AAG17453.1	Oxytricha_trifallax_AAG35198.1	Misgurnus_mizolepis_AAG48576.1	Arabidopsis_thaliana_AAG51045.1	Saccharomyces_bayanus_BAA02097.1	Halocynthia_roretzi_BAA06100.1	Cyanidioschyzon_merolae_BAA06866.1	Halocynthia_roretzi_BAA08112.1	Chlamydomonas_reinhardtii_BAA09449.1	Molgula_oculata_BAA11264.1	Molgula_oculata_BAA12860.1	Schizosaccharomyces_pombe_BAA21389.1	Saccharomyces_cerevisiae_BAA21512.1	Pneumocystis_carinii_BAA23210.1	Nannochloris_bacillaris_BAA25911.1	Oikopleura_longicauda_BAA86217.1	Coprinus_cinereus_BAA86222.1	Arabidopsis_thaliana_BAB01806.1	Acanthamoeba_castellanii_CAA23399.1	Glycine_max_CAA23728.1	Rattus_norvegicus_CAA24528.1	Rattus_norvegicus_CAA24529.1	Gallus_gallus_CAA24753.1	Gallus_gallus_CAA25004.1	Gallus_gallus_CAA26135.1	Gallus_gallus_CAA26486.1	Strongylocentrotus_franciscanus_CAA26877.1	Dictyostelium_discoideum_CAA27031.1	Dictyostelium_discoideum_CAA27032.1	Dictyostelium_discoideum_CAA27033.1	Dictyostelium_discoideum_CAA27034.1	Bombyx_mori_CAA28192.1	Xenopus_laevis_CAA28375.1	Bombyx_mori_CAA28818.1	Tetrahymena_pyriformis_CAA28824.1	Xenopus_laevis_CAA28979.1	Bombyx_mori_CAA29661.1	Thermomyces_lanuginosus_CAA30346.1	Physarum_polycephalum_CAA30629.1	Xenopus_laevis_CAA31041.1	Oryza_sativa_CAA33874.1	Phytophthora_megasperma_CAA33907.1	Candida_albicans_CAA34413.1	Caenorhabditis_elegans_CAA34717.1	Caenorhabditis_elegans_CAA34718.1	Solanum_tuberosum_CAA39278.1	Solanum_tuberosum_CAA39279.1	Solanum_tuberosum_CAA39280.1	Solanum_tuberosum_CAA39281.1	Solanum_tuberosum_CAA39282.1	Achlya_bisexualis_CAA42559.1	Nicotiana_tabacum_CAA45149.1	Podocoryne_carnea_CAA48798.1	Puccinia_graminis_CAA54848.1	Lumbricus_terrestris_CAA65364.1	Lumbricus_terrestris_CAA65365.1	Helicoverpa_armigera_CAA66218.1	Histriculus_cavicola_CAA72778.1	Caenorhabditis_elegans_CAB04675.1	Caenorhabditis_elegans_CAB05817.1	Brugia_malayi_CAB06627.1	Candida_dubliniensis_CAB53863.1	Yarrowia_lipolytica_CAB62086.1	Arabidopsis_thaliana_CAB62322.1	Arabidopsis_thaliana_CAB88337.1	Leishmania_major_CAC22667.1;
end;

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;
end;

begin trees;
	tree actin = (Euplotes_crassus_AAA29122.1:0.51457,(Oxytricha_nova_AAA50195.1:0.4725,(Trichomonas_vaginalis_AAC47679.1:0.21792,((((((Physarum_polycephalum_CAA30629.1:0.00703,Physarum_polycephalum_AAA29973.1:0.20767)154:0.07889[1],Acanthamoeba_castellanii_CAA23399.1:0.07816)153:0.02124[1],((Nannochloris_bacillaris_BAA25911.1:0.1731,Cyanidioschyzon_merolae_BAA06866.1:0.3884)118:0.06763[1],((((Plasmodium_falciparum_AAA29467.1:0.59865,Toxoplasma_gondii_AAC13766.1:0.09027)125:0.08292[1],(((Leishmania_major_AAA19789.1:0.00395,Leishmania_major_CAC22667.1:0.00105)129:0.15424[1],(Trypanosoma_brucei_AAA30152.1:0.01154,Trypanosoma_brucei_AAA30151.1:0.00472)128:0.18998[1])127:0.17042[1],Chlamydomonas_reinhardtii_AAC49834.1:0.74446)126:0.13984[1])124:0.03566[0.931],((Phytophthora_infestans_AAA33749.1:0.04858,(Phytophthora_infestans_AAA33750.1:0.11617,Phytophthora_megasperma_CAA33907.1:0.09169)123:0.18672[1])122:0.02095[0.702],Achlya_bisexualis_CAA42559.1:0.14636)121:0.07527[1])120:0.03517[1],((Chlamydomonas_reinhardtii_BAA09449.1:0.06497,Volvox_carteri_AAA34243.1:0.13964)131:0.08037[1],(Mesostigma_viride_AAC16055.1:0.0924,((Avena_nuda_AAF40438.1:0.04661,Oryza_sativa_CAA33874.1:0.05291)152:0.02767[0.986],((Striga_asiatica_AAC49651.1:0.08556,Striga_asiatica_AAC49652.1:0.07153)135:0.03864[1],((((Arabidopsis_thaliana_CAB62322.1:0.12718,Arabidopsis_thaliana_CAB88337.1:0.15514)145:0.02988[0.99],(Solanum_tuberosum_CAA39279.1:0.11754,Solanum_tuberosum_CAA39282.1:0.08543)144:0.07022[1])143:0.02063[0.97],(((Solanum_tuberosum_CAA39278.1:0.07746,Solanum_tuberosum_CAA39280.1:0.05359)140:0.04953[1],Nicotiana_tabacum_CAA45149.1:0.12829)139:0.03137[0.998],(Gossypium_hirsutum_AAC31886.1:0.08724,(Glycine_max_AAA33939.1:0.17178,Glycine_max_AAC05272.1:0.10741)142:0.02178[0.643])141:0.02781[0.904])138:0.0217[0.971])137:0.02767[1],(Arabidopsis_thaliana_AAG51045.1:0.0927,((Glycine_max_CAA23728.1:0.13106,Solanum_tuberosum_CAA39281.1:0.14073)148:0.04635[1],((Arabidopsis_thaliana_AAF69724.1:0.04735,Arabidopsis_thaliana_BAB01806.1:0.05804)151:0.07987[1],(Arabidopsis_thaliana_AAB63535.1:0.15785,Arabidopsis_thaliana_AAF18605.1:0.09121)150:0.1844[1])149:0.03678[0.894])147:0.03431[0.941])146:0.02294[0.678])136:0.03346[0.976])134:0.06373[1])133:0.10928[1])132:0.04188[1])130:0.01568[0.957])119:0.00869[0.643])117:0.03324[1])116:0.01473[0.673],(((Echinococcus_granulosus_AAC80574.1:0.18842,(Drosophila_melanogaster_AAF57954.1:0.72692,Echinococcus_granulosus_AAC80573.1:0.11371)33:0.03808[0.486])32:0.06997[0.945],Taenia_solium_AAA30092.1:0.08523)31:0.05094[0.954],((((Heliocidaris_erythrogramma_AAA86869.1:0.00471,Heliocidaris_tuberculata_AAA86534.1:0.00197)57:0.05306[1],(((Tripneustes_gratilla_AAB31965.2:0.02519,((Heliocidaris_erythrogramma_AAA96348.1:0.00917,Heliocidaris_tuberculata_AAA96349.1:0.00811)67:0.01482[1],((Strongylocentrotus_purpuratus_AAA30032.1:0.01166,Strongylocentrotus_purpuratus_AAA30042.1:0.00694)65:0.00986[1],(Strongylocentrotus_purpuratus_AAA30030.1:0.05602,Strongylocentrotus_franciscanus_CAA26877.1:0.01069)66:0.00438[0.87])64:0.00744[1])63:0.007[0.718])62:0.04389[1],(Pisaster_ochraceus_AAA29787.1:0.0669,Pisaster_ochraceus_AAA29788.1:0.0595)61:0.04522[1])60:0.01495[0.999],(Lumbricus_terrestris_CAA65365.1:0.08019,Lumbricus_terrestris_CAA65364.1:0.05399)59:0.03732[1])58:0.00957[0.601])56:0.02204[1],((((Halocynthia_roretzi_BAA08112.1:0.14727,(((Molgula_oculata_BAA12860.1:0.07206,(Molgula_oculata_BAA11264.1:0.089,Halocynthia_roretzi_BAA06100.1:0.16125)47:0.08709[1])46:0.03343[0.999],Oikopleura_longicauda_BAA86217.1:0.09188)45:0.04068[1],(((Saccharomyces_cerevisiae_BAA21512.1:0.02896,Saccharomyces_bayanus_BAA02097.1:0.02067)51:0.01849[0.964],(Kluyveromyces_lactis_AAA35251.1:0.04366,Candida_glabrata_AAC25760.1:0.03991)50:0.02639[0.986])49:0.14508[1],(Podocoryne_carnea_CAA48798.1:0.12949,(Dictyostelium_discoideum_CAA27031.1:0.00391,((Dictyostelium_discoideum_CAA27033.1:0.01498,Dictyostelium_discoideum_CAA27034.1:0.07466)55:0.06883[1],Dictyostelium_discoideum_CAA27032.1:0.01991)54:0.05336[1])53:0.09742[1])52:0.03764[0.785])48:0.0361[0.999])44:0.01735[0.758])43:0.02376[0.999],((Wuchereria_bancrofti_AAF25819.1:0.03785,Brugia_malayi_CAB06627.1:0.0391)42:0.14303[1],Setaria_digitata_AAD13153.1:0.18154)41:0.05735[1])40:0.03926[1],((Caenorhabditis_elegans_CAB04675.1:0.00071,Caenorhabditis_elegans_CAA34718.1:0.00222)39:0.03355[1],Caenorhabditis_elegans_CAA34717.1:0.00514)38:0.05873[1])37:0.02009[0.588],Caenorhabditis_elegans_CAB05817.1:0.13685)36:0.03465[1])35:0.03088[1],(((Misgurnus_mizolepis_AAG48576.1:0.07273,((Homo_sapiens_AAA51579.1:0.07883,(Rattus_norvegicus_CAA24528.1:0.03211,Cricetulus_griseus_AAA64871.1:0.01166)87:0.03673[1])86:0.03648[1],((((Rivulus_marmoratus_AAF26678.1:0.02288,(Fugu_rubripes_AAC59889.1:0.02718,Platichthys_flesus_AAF63665.1:0.02276)92:0.00659[0.734])91:0.00713[0.819],Oryzias_latipes_AAD14159.2:0.03373)90:0.0358[1],((((Xenopus_laevis_AAA49638.1:0.01937,Xenopus_laevis_AAA49639.1:0.01829)100:0.08479[1],Fugu_rubripes_AAC59891.1:0.12613)99:0.02163[0.964],Gallus_gallus_CAA25004.1:0.05347)98:0.02209[0.987],(Cyprinus_carpio_AAA68886.1:0.00494,((Ctenopharyngodon_idella_AAA49197.1:0.00374,Hypophthalmichthys_molitrix_AAG17452.1:0.00612)96:0.00931[1],(Rhodeus_notatus_AAG17453.1:0.01094,Rhynchocypris_oxycephalus_AAF63689.1:0.01177)97:0.00604[0.997])95:0.00673[0.939])94:0.02834[1])93:0.02013[1])89:0.00878[0.902],Gallus_gallus_CAA26486.1:0.10935)88:0.01391[0.99])85:0.01649[0.996])84:0.04011[1],(((((Fugu_rubripes_AAC59897.1:0.08387,Fugu_rubripes_AAC59894.1:0.01266)110:0.07413[1],((Homo_sapiens_AAB59619.1:0.07835,(Gallus_gallus_CAA26135.1:0.09979,(Gallus_gallus_AAB12010.1:0.12931,Xenopus_laevis_CAA28979.1:0.10186)115:0.02824[0.579])114:0.02054[0.929])113:0.01761[0.884],(Xenopus_laevis_CAA28375.1:0.0551,Xenopus_laevis_CAA31041.1:0.12165)112:0.02968[1])111:0.02051[0.999])109:0.02299[0.999],(((Sus_scrofa_AAC48692.1:0.02197,Bos_taurus_AAA82873.1:0.03247)107:0.04563[1],(Mus_musculus_AAA37141.1:0.00827,Rattus_norvegicus_CAA24529.1:0.02308)108:0.03652[1])106:0.02652[1],Gallus_gallus_CAA24753.1:0.06497)105:0.02082[1])104:0.01401[0.924],(Fugu_rubripes_AAC59893.1:0.09448,Fugu_rubripes_AAC59892.1:0.06133)103:0.01796[0.979])102:0.00841[0.866],Ictalurus_punctatus_AAF81097.1:0.0691)101:0.05709[1])83:0.02658[0.887],((Drosophila_melanogaster_AAF46098.1:0.0545,(Anopheles_gambiae_AAA56881.1:0.07745,((Bombyx_mori_AAC47432.1:0.01227,Bombyx_mori_CAA28192.1:0.01521)82:0.0667[1],Helicoverpa_armigera_CAA66218.1:0.04263)81:0.05449[1])80:0.01816[0.893])79:0.0116[0.864],((Drosophila_melanogaster_AAF55198.1:0.06608,Drosophila_melanogaster_AAF51800.1:0.06618)71:0.03518[1],((Bombyx_mori_CAA28818.1:0.03398,Bombyx_mori_CAA29661.1:0.10021)73:0.05725[1],(Drosophila_melanogaster_AAA28320.1:0.06729,((Bactrocera_dorsalis_AAA62342.1:0.03766,(Bactrocera_dorsalis_AAA62343.1:0.03007,(Bactrocera_dorsalis_AAA62344.1:0.11011,Bactrocera_dorsalis_AAA62341.1:0.1029)78:0.05936[1])77:0.03779[1])76:0.07658[1],Drosophila_melanogaster_AAF46640.1:0.01349)75:0.02214[1])74:0.01277[0.996])72:0.00671[0.873])70:0.01322[1])69:0.01625[0.948])68:0.01991[0.84])34:0.00719[0.409])30:0.01191[0.862])29:0.0136[0.661],((((Pneumocystis_carinii_BAA23210.1:0.29746,Schizosaccharomyces_pombe_BAA21389.1:0.09791)24:0.03471[0.797],((((Pichia_angusta_AAC34678.1:0.09532,Pichia_pastoris_AAF27627.1:0.09264)16:0.03468[1],(Candida_dubliniensis_CAB53863.1:0.00529,Candida_albicans_CAA34413.1:0.01751)17:0.07662[1])15:0.05297[1],(((Tetrahymena_pyriformis_CAA28824.1:0.04269,Tetrahymena_thermophila_AAA30109.1:0.03077)21:0.2382[1],((Plasmodium_falciparum_AAA29465.1:0.00213,Plasmodium_falciparum_AAD55770.1:0.00208)23:0.19307[1],Cryptosporidium_parvum_AAA28295.1:0.13048)22:0.09277[1])20:0.02691[0.603],(Naegleria_gruberi_AAF37002.1:0.21879,Naegleria_fowleri_AAB42183.1:0.04142)19:0.08243[1])18:0.06075[1])14:0.08526[1],Puccinia_graminis_CAA54848.1:0.15756)13:0.05394[1])12:0.10576[1],(Yarrowia_lipolytica_CAB62086.1:0.13242,(Thermomyces_lanuginosus_CAA30346.1:0.09336,(Neurospora_crassa_AAC78496.1:0.05155,(Penicillium_chrysogenum_AAF00007.1:0.04247,Emericella_nidulans_AAA33290.1:0.06768)28:0.01287[0.919])27:0.01372[0.937])26:0.02632[1])25:0.01525[0.997])11:0.01973[1],(((Schizophyllum_commune_AAD38853.1:0.02728,Schizophyllum_commune_AAD38204.1:0.32969)10:0.07552[1],(Suillus_bovinus_AAD38849.1:0.08483,Suillus_bovinus_AAD38855.1:0.07774)9:0.07617[1])8:0.02092[0.991],Coprinus_cinereus_BAA86222.1:0.06969)7:0.04901[1])6:0.02332[1])5:0.07554[1],Chondrus_crispus_AAA18589.1:0.30023)4:0.06369[1])3:0.15279[1])2:0.0898[1],(Urostyla_grandis_AAF00922.1:0.10854,((((Oxytricha_trifallax_AAG35198.1:0.00232,Halteria_grandinella_AAF00923.1:0.00522)159:0.01063[1],(Oxytricha_fallax_AAA29394.1:0.02714,Oxytricha_trifallax_AAA85836.1:0.01303)160:0.01096[1])158:0.05825[1],(Oxytricha_nova_AAA29393.1:0.10602,Hypotrichida_sp_AAF00921.1:0.05415)161:0.022[0.999])157:0.01068[0.522],Histriculus_cavicola_CAA72778.1:0.0649)156:0.0872[1])155:0.12639[1])1;
end;